ApprovalStatus

  CaCORE::CaMOD::ApprovalStatus - Perl extension for ApprovalStatus.

Abstract

  The CaCORE::CaMOD::bean::ApprovalStatus is a Perl object representation of the
  caBIO generic object.

Description

Attributes of ApprovalStatus

  The following are all the attributes of the ApprovalStatus object and their data types:
        name    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of ApprovalStatus

  The following are all the objects that are associated with the ApprovalStatus:
  End Associations and related methods


Availability

  CaCORE::CaMOD::Availability - Perl extension for Availability.

Abstract

  The CaCORE::CaMOD::bean::Availability is a Perl object representation of the
  caBIO generic object.

Description

  Dates on which a animal model record was entered, modified or release to the intended viewing audience.

Attributes of Availability

  The following are all the attributes of the Availability object and their data types:
        enteredDate     dateTime
        visibleTo       string
        id      long
        releaseDate     dateTime
        modifiedDate    dateTime
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Availability

  The following are all the objects that are associated with the Availability:
  End Associations and related methods


AbstractCancerModel

  CaCORE::CaMOD::AbstractCancerModel - Perl extension for AbstractCancerModel.

Abstract

  The CaCORE::CaMOD::bean::AbstractCancerModel is a Perl object representation of the
  caBIO generic object.

Description

Attributes of AbstractCancerModel

  The following are all the attributes of the AbstractCancerModel object and their data types:
        experimentDesign        string
        modelDescriptor string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of AbstractCancerModel

  The following are all the objects that are associated with the AbstractCancerModel:
	ApprovalStatus: 	Many to one assoication, use getApprovalStatus to get the associated ApprovalStatus.
	Availability: 	Many to one assoication, use getAvailability to get the associated Availability.
	PartyRole: 	One to many assoication, use getPartyRoleCollection to get a collection of associated PartyRole.
	Publication: 	One to many assoication, use getPublicationCollection to get a collection of associated Publication.
  End Associations and related methods


TumorCode

  CaCORE::CaMOD::TumorCode - Perl extension for TumorCode.

Abstract

  The CaCORE::CaMOD::bean::TumorCode is a Perl object representation of the
  caBIO generic object.

Description

  A tumor code captures the tumor type and origin species used for a drug screen test.

Attributes of TumorCode

  The following are all the attributes of the TumorCode object and their data types:
        code    string
        description     string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of TumorCode

  The following are all the objects that are associated with the TumorCode:
  End Associations and related methods


Xenograft

  CaCORE::CaMOD::Xenograft - Perl extension for Xenograft.

Abstract

  The CaCORE::CaMOD::bean::Xenograft is a Perl object representation of the
  caBIO generic object.

Description

  This object describes to xenografts (implanting tissue or cell lines from a different species) and allografts (implanting tissue or cell lines form the same species). The grafts are transplanted in immuno-compromised animals where they grow and, depending on the graft material, form tumors.

Attributes of Xenograft

  The following are all the attributes of the Xenograft object and their data types:
        geneticManipulation     string
        administrativeSite      string
        type    string
        parentalCellLineName    string
        modificationDescription string
        name    string
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Xenograft

  The following are all the objects that are associated with the Xenograft:
	InvivoResult: 	One to many assoication, use getInvivoResultCollection to get a collection of associated InvivoResult.
	TumorCode: 	Many to one assoication, use getTumorCode to get the associated TumorCode.
	OriginTaxon: 	Many to one assoication, use getOriginTaxon to get the associated OriginTaxon.
	HostTaxon: 	Many to one assoication, use getHostTaxon to get the associated HostTaxon.
  End Associations and related methods


TreatmentSchedule

  CaCORE::CaMOD::TreatmentSchedule - Perl extension for TreatmentSchedule.

Abstract

  The CaCORE::CaMOD::bean::TreatmentSchedule is a Perl object representation of the
  caBIO generic object.

Description

  Treatment schedule for the pre-clinical trial / therapeutic experiment describing the dosages of the drug and the times of the treatment.

Attributes of TreatmentSchedule

  The following are all the attributes of the TreatmentSchedule object and their data types:
        regimen string
        dosage  string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of TreatmentSchedule

  The following are all the objects that are associated with the TreatmentSchedule:
  End Associations and related methods


Nomenclature

  CaCORE::CaMOD::Nomenclature - Perl extension for Nomenclature.

Abstract

  The CaCORE::CaMOD::bean::Nomenclature is a Perl object representation of the
  caBIO generic object.

Description

  Official nomenclature name for mouse and rat models.

Attributes of Nomenclature

  The following are all the attributes of the Nomenclature object and their data types:
        name    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Nomenclature

  The following are all the objects that are associated with the Nomenclature:
  End Associations and related methods


GenotypeSummary

  CaCORE::CaMOD::GenotypeSummary - Perl extension for GenotypeSummary.

Abstract

  The CaCORE::CaMOD::bean::GenotypeSummary is a Perl object representation of the
  caBIO generic object.

Description

  Listing of the genetic changes made deliberately in order to generate the animal model.

Attributes of GenotypeSummary

  The following are all the attributes of the GenotypeSummary object and their data types:
        summary string
        genotype        string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of GenotypeSummary

  The following are all the objects that are associated with the GenotypeSummary:
	Nomenclature: 	Many to one assoication, use getNomenclature to get the associated Nomenclature.
  End Associations and related methods


Conditionality

  CaCORE::CaMOD::Conditionality - Perl extension for Conditionality.

Abstract

  The CaCORE::CaMOD::bean::Conditionality is a Perl object representation of the
  caBIO generic object.

Description

  Indicates if a transgene or targeted modification is done conditionally (time or tissue specific).

Attributes of Conditionality

  The following are all the attributes of the Conditionality object and their data types:
        description     string
        conditionedBy   string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Conditionality

  The following are all the objects that are associated with the Conditionality:
  End Associations and related methods


Image

  CaCORE::CaMOD::Image - Perl extension for Image.

Abstract

  The CaCORE::CaMOD::bean::Image is a Perl object representation of the
  caBIO generic object.

Description

  Images related to the animal model e.g. histology images, blots, and graphics.

Attributes of Image

  The following are all the attributes of the Image object and their data types:
        description     string
        title   string
        id      long
        staining        string
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Image

  The following are all the objects that are associated with the Image:
	Availability: 	Many to one assoication, use getAvailability to get the associated Availability.
  End Associations and related methods


EngineeredGene

  CaCORE::CaMOD::EngineeredGene - Perl extension for EngineeredGene.

Abstract

  The CaCORE::CaMOD::bean::EngineeredGene is a Perl object representation of the
  caBIO generic object.

Description

  Manipulated Gene introduced in the animal model.

Attributes of EngineeredGene

  The following are all the attributes of the EngineeredGene object and their data types:
        cabioId long
        name    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of EngineeredGene

  The following are all the objects that are associated with the EngineeredGene:
	Gene: 	One to many assoication, use getGeneCollection to get a collection of associated Gene.
	DatabaseCrossReference: 	One to many assoication, use getDatabaseCrossReferenceCollection to get a collection of associated DatabaseCrossReference.
	GenotypeSummary: 	Many to one assoication, use getGenotypeSummary to get the associated GenotypeSummary.
	ExpressionFeature: 	One to many assoication, use getExpressionFeatureCollection to get a collection of associated ExpressionFeature.
	Conditionality: 	Many to one assoication, use getConditionality to get the associated Conditionality.
	Image: 	Many to one assoication, use getImage to get the associated Image.
  End Associations and related methods


IntegrationType

  CaCORE::CaMOD::IntegrationType - Perl extension for IntegrationType.

Abstract

  The CaCORE::CaMOD::bean::IntegrationType is a Perl object representation of the
  caBIO generic object.

Description

  Location of the integration of the engineered gene e.g. random or targeted.

Attributes of IntegrationType

  The following are all the attributes of the IntegrationType object and their data types:
        name    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of IntegrationType

  The following are all the objects that are associated with the IntegrationType:
	GenomicSegment: 	One to many assoication, use getGenomicSegmentCollection to get a collection of associated GenomicSegment.
	Transgene: 	One to many assoication, use getTransgeneCollection to get a collection of associated Transgene.
  End Associations and related methods


Transgene

  CaCORE::CaMOD::Transgene - Perl extension for Transgene.

Abstract

  The CaCORE::CaMOD::bean::Transgene is a Perl object representation of the
  caBIO generic object.

Description

  A transgene is an engineered gene consisting at least of a regulatory element and a coding sequence; regulatory element and coding sequence can come from different species.

Attributes of Transgene

  The following are all the attributes of the Transgene object and their data types:
        locationOfIntegration   string
        engineeredGeneId        long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Transgene

  The following are all the objects that are associated with the Transgene:
	RegulatoryElement: 	One to many assoication, use getRegulatoryElementCollection to get a collection of associated RegulatoryElement.
	IntegrationType: 	Many to one assoication, use getIntegrationType to get the associated IntegrationType.
  End Associations and related methods


Therapy

  CaCORE::CaMOD::Therapy - Perl extension for Therapy.

Abstract

  The CaCORE::CaMOD::bean::Therapy is a Perl object representation of the
  caBIO generic object.

Description

  Pre-clinical trials experiment conducted on the animal model with the goal to reduce cancer burden.

Attributes of Therapy

  The following are all the attributes of the Therapy object and their data types:
        experiment      string
        comments        string
        id      long
        results string
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Therapy

  The following are all the objects that are associated with the Therapy:
	TreatmentSchedule: 	Many to one assoication, use getTreatmentSchedule to get the associated TreatmentSchedule.
	Agent: 	Many to one assoication, use getAgent to get the associated Agent.
	Publication: 	One to many assoication, use getPublicationCollection to get a collection of associated Publication.
  End Associations and related methods


YeastModel

  CaCORE::CaMOD::YeastModel - Perl extension for YeastModel.

Abstract

  The CaCORE::CaMOD::bean::YeastModel is a Perl object representation of the
  caBIO generic object.

Description

  A yeast model captures the yeast strains altered in the NCI Yeast Anticancer Drug Screen.

Attributes of YeastModel

  The following are all the attributes of the YeastModel object and their data types:
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of YeastModel

  The following are all the objects that are associated with the YeastModel:
	TargetedModification: 	One to many assoication, use getTargetedModificationCollection to get a collection of associated TargetedModification.
	ScreeningResult: 	One to many assoication, use getScreeningResultCollection to get a collection of associated ScreeningResult.
  End Associations and related methods


TargetedModification

  CaCORE::CaMOD::TargetedModification - Perl extension for TargetedModification.

Abstract

  The CaCORE::CaMOD::bean::TargetedModification is a Perl object representation of the
  caBIO generic object.

Description

  Modification targeted to a specific gene or a specific part of the gene to either suppress the function of the gene or insert marker sequences like loxP sites.

Attributes of TargetedModification

  The following are all the attributes of the TargetedModification object and their data types:
        esCellLineName  string
        blastocystName  string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of TargetedModification

  The following are all the objects that are associated with the TargetedModification:
	ModificationType: 	One to many assoication, use getModificationTypeCollection to get a collection of associated ModificationType.
	YeastModel: 	Many to one assoication, use getYeastModel to get the associated YeastModel.
	EngineeredGene: 	Many to one assoication, use getEngineeredGene to get the associated EngineeredGene.
  End Associations and related methods


SexDistribution

  CaCORE::CaMOD::SexDistribution - Perl extension for SexDistribution.

Abstract

  The CaCORE::CaMOD::bean::SexDistribution is a Perl object representation of the
  caBIO generic object.

Description

  Object indicated if the phenotype was observed in both sexes or only in one.

Attributes of SexDistribution

  The following are all the attributes of the SexDistribution object and their data types:
        type    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of SexDistribution

  The following are all the objects that are associated with the SexDistribution:
  End Associations and related methods


SegmentType

  CaCORE::CaMOD::SegmentType - Perl extension for SegmentType.

Abstract

  The CaCORE::CaMOD::bean::SegmentType is a Perl object representation of the
  caBIO generic object.

Description

  specifies the type of library that the genomic segment was retrieved from such as BAC or YAC.

Attributes of SegmentType

  The following are all the attributes of the SegmentType object and their data types:
        name    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of SegmentType

  The following are all the objects that are associated with the SegmentType:
  End Associations and related methods


Role

  CaCORE::CaMOD::Role - Perl extension for Role.

Abstract

  The CaCORE::CaMOD::bean::Role is a Perl object representation of the
  caBIO generic object.

Description

  Role that a person or organization plays e.g. public user, reviewer.

Attributes of Role

  The following are all the attributes of the Role object and their data types:
        name    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Role

  The following are all the objects that are associated with the Role:
	PartyRole: 	One to many assoication, use getPartyRoleCollection to get a collection of associated PartyRole.
  End Associations and related methods


RepositoryInfo

  CaCORE::CaMOD::RepositoryInfo - Perl extension for RepositoryInfo.

Abstract

  The CaCORE::CaMOD::bean::RepositoryInfo is a Perl object representation of the
  caBIO generic object.

Description

  Some animal models are distributed by the MMHCC mouse repository. Object contains information about the availability of a particular model from the repository. A submitter of data to the cancer models database can also indicate if their model should be submitted to the repository.

Attributes of RepositoryInfo

  The following are all the attributes of the RepositoryInfo object and their data types:

        inTheRepository long
        sentEmailContent        string
        id      long
        suggestSubmission       long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of RepositoryInfo

  The following are all the objects that are associated with the RepositoryInfo:

  End Associations and related methods


RegulatoryElementType

  CaCORE::CaMOD::RegulatoryElementType - Perl extension for RegulatoryElementType.

Abstract

  The CaCORE::CaMOD::bean::RegulatoryElementType is a Perl object representation of the
  caBIO generic object.

Description

  Type of the regulatory element e.g. promoter, polyA signal.

Attributes of RegulatoryElementType

  The following are all the attributes of the RegulatoryElementType object and their data types:

        name    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of RegulatoryElementType

  The following are all the objects that are associated with the RegulatoryElementType:

  End Associations and related methods


RegulatoryElement

  CaCORE::CaMOD::RegulatoryElement - Perl extension for RegulatoryElement.

Abstract

  The CaCORE::CaMOD::bean::RegulatoryElement is a Perl object representation of the
  caBIO generic object.

Description

  A regulatory element controls the expression of a gene and/or and engineered gene.

Attributes of RegulatoryElement

  The following are all the attributes of the RegulatoryElement object and their data types:

        name    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of RegulatoryElement

  The following are all the objects that are associated with the RegulatoryElement:

	Promoter: 	One to many assoication, use getPromoterCollection to get a collection of associated Promoter.
	Taxon: 	Many to one assoication, use getTaxon to get the associated Taxon.
	RegulatoryElementType: 	Many to one assoication, use getRegulatoryElementType to get the associated RegulatoryElementType.
  End Associations and related methods


PublicationStatus

  CaCORE::CaMOD::PublicationStatus - Perl extension for PublicationStatus.

Abstract

  The CaCORE::CaMOD::bean::PublicationStatus is a Perl object representation of the
  caBIO generic object.

Description

  Status of the publication e.g. published, submitted.

Attributes of PublicationStatus

  The following are all the attributes of the PublicationStatus object and their data types:

        name    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of PublicationStatus

  The following are all the objects that are associated with the PublicationStatus:

  End Associations and related methods


Publication

  CaCORE::CaMOD::Publication - Perl extension for Publication.

Abstract

  The CaCORE::CaMOD::bean::Publication is a Perl object representation of the
  caBIO generic object.

Description

  Publications describing the animal model itself or experiments in which the animal model was used.

Attributes of Publication

  The following are all the attributes of the Publication object and their data types:

        volume  string
        endPage long
        year    long
        title   string
        pmid    long
        startPage       long
        journal string
        authors string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Publication

  The following are all the objects that are associated with the Publication:

	PublicationStatus: 	Many to one assoication, use getPublicationStatus to get the associated PublicationStatus.
  End Associations and related methods


Promoter

  CaCORE::CaMOD::Promoter - Perl extension for Promoter.

Abstract

  The CaCORE::CaMOD::bean::Promoter is a Perl object representation of the
  caBIO generic object.

Description

  Promoter is a subcategory of the regulatory element.

Attributes of Promoter

  The following are all the attributes of the Promoter object and their data types:

        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Promoter

  The following are all the objects that are associated with the Promoter:

	Gene: 	Many to one assoication, use getGene to get the associated Gene.
	RegulatoryElement: 	Many to one assoication, use getRegulatoryElement to get the associated RegulatoryElement.
  End Associations and related methods


Phenotype

  CaCORE::CaMOD::Phenotype - Perl extension for Phenotype.

Abstract

  The CaCORE::CaMOD::bean::Phenotype is a Perl object representation of the
  caBIO generic object.

Description

  Phenotype displayed by the animal model such as neoplastic lesions, other diseases, behavioral problem.

Attributes of Phenotype

  The following are all the attributes of the Phenotype object and their data types:

        description     string
        breedingNotes   string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Phenotype

  The following are all the objects that are associated with the Phenotype:

	SexDistribution: 	Many to one assoication, use getSexDistribution to get the associated SexDistribution.
  End Associations and related methods


Party

  CaCORE::CaMOD::Party - Perl extension for Party.

Abstract

  The CaCORE::CaMOD::bean::Party is a Perl object representation of the
  caBIO generic object.

Description

  Entity that has access to the data, either a person or an organization.

Attributes of Party

  The following are all the attributes of the Party object and their data types:

        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Party

  The following are all the objects that are associated with the Party:

	PartyRole: 	One to many assoication, use getPartyRoleCollection to get a collection of associated PartyRole.
	ContactInfo: 	One to many assoication, use getContactInfoCollection to get a collection of associated ContactInfo.
  End Associations and related methods


Person

  CaCORE::CaMOD::Person - Perl extension for Person.

Abstract

  The CaCORE::CaMOD::bean::Person is a Perl object representation of the
  caBIO generic object.

Description

  Person's first and last name and the connection to the party.

Attributes of Person

  The following are all the attributes of the Person object and their data types:

        partyId long
        firstName       string
        lastName        string
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Person

  The following are all the objects that are associated with the Person:

  End Associations and related methods


PartyRole

  CaCORE::CaMOD::PartyRole - Perl extension for PartyRole.

Abstract

  The CaCORE::CaMOD::bean::PartyRole is a Perl object representation of the
  caBIO generic object.

Description

  Object connects the party (organization or person) with the animal model.

Attributes of PartyRole

  The following are all the attributes of the PartyRole object and their data types:

        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of PartyRole

  The following are all the objects that are associated with the PartyRole:

	Role: 	Many to one assoication, use getRole to get the associated Role.
	AnimalModel: 	One to many assoication, use getAnimalModelCollection to get a collection of associated AnimalModel.
	Party: 	Many to one assoication, use getParty to get the associated Party.
  End Associations and related methods


Organization

  CaCORE::CaMOD::Organization - Perl extension for Organization.

Abstract

  The CaCORE::CaMOD::bean::Organization is a Perl object representation of the
  caBIO generic object.

Description

  Organizational unit like a laboratory, institute or consortium.

Attributes of Organization

  The following are all the attributes of the Organization object and their data types:

        partyId long
        name    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of Organization

  The following are all the objects that are associated with the Organization:

  End Associations and related methods


MicroArrayData

  CaCORE::CaMOD::MicroArrayData - Perl extension for MicroArrayData.

Abstract

  The CaCORE::CaMOD::bean::MicroArrayData is a Perl object representation of the
  caBIO generic object.

Description

  Data of microarray experiments generated from the animal model.

Attributes of MicroArrayData

  The following are all the attributes of the MicroArrayData object and their data types:

        experimentName  string
        id      long
        experimentId    long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of MicroArrayData

  The following are all the objects that are associated with the MicroArrayData:

	Availability: 	Many to one assoication, use getAvailability to get the associated Availability.
  End Associations and related methods


JaxInfo

  CaCORE::CaMOD::JaxInfo - Perl extension for JaxInfo.

Abstract

  The CaCORE::CaMOD::bean::JaxInfo is a Perl object representation of the
  caBIO generic object.

Description

  Identification number (stock number) of strain at the Jackson Laboratory, number can be used for ordering the strain; http://www.jax.org.

Attributes of JaxInfo

  The following are all the attributes of the JaxInfo object and their data types:

        jaxStockNo      long
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of JaxInfo

  The following are all the objects that are associated with the JaxInfo:

  End Associations and related methods


EnvironmentalFactor

  CaCORE::CaMOD::EnvironmentalFactor - Perl extension for EnvironmentalFactor.

Abstract

  The CaCORE::CaMOD::bean::EnvironmentalFactor is a Perl object representation of the
  caBIO generic object.

Description

  Chemical, radiation, hormone treatment or other environmental factor that initiates or supports development of neoplasias.

Attributes of EnvironmentalFactor

  The following are all the attributes of the EnvironmentalFactor object and their data types:

        name    string
        type    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of EnvironmentalFactor

  The following are all the objects that are associated with the EnvironmentalFactor:

	InducedMutation: 	One to many assoication, use getInducedMutationCollection to get a collection of associated InducedMutation.
  End Associations and related methods


InducedMutation

  CaCORE::CaMOD::InducedMutation - Perl extension for InducedMutation.

Abstract

  The CaCORE::CaMOD::bean::InducedMutation is a Perl object representation of the
  caBIO generic object.

Description

  Induced mutations are defined as mutations triggered by radiation, chemicals or other means. Progeny of the treated animal inherits the mutation.

Attributes of InducedMutation

  The following are all the attributes of the InducedMutation object and their data types:

        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of InducedMutation

  The following are all the objects that are associated with the InducedMutation:

	EnvironmentalFactor: 	Many to one assoication, use getEnvironmentalFactor to get the associated EnvironmentalFactor.
	EngineeredGene: 	One to many assoication, use getEngineeredGeneCollection to get a collection of associated EngineeredGene.
  End Associations and related methods


GenomicSegment

  CaCORE::CaMOD::GenomicSegment - Perl extension for GenomicSegment.

Abstract

  The CaCORE::CaMOD::bean::GenomicSegment is a Perl object representation of the
  caBIO generic object.

Description

  Genomic segment extracted from a library e.g. BAC or YAC library to be used in the genetic manipulation of the animal model.

Attributes of GenomicSegment

  The following are all the attributes of the GenomicSegment object and their data types:

        locationOfIntegration   string
        segmentSize     string
        id      long
        cloneDesignator string
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of GenomicSegment

  The following are all the objects that are associated with the GenomicSegment:

	SegmentType: 	Many to one assoication, use getSegmentType to get the associated SegmentType.
	EngineeredGene: 	One to many assoication, use getEngineeredGeneCollection to get a collection of associated EngineeredGene.
  End Associations and related methods


GeneticAlteration

  CaCORE::CaMOD::GeneticAlteration - Perl extension for GeneticAlteration.

Abstract

  The CaCORE::CaMOD::bean::GeneticAlteration is a Perl object representation of the
  caBIO generic object.

Description

  Genetic alterations found in the neoplastic lesions of the animal model. These alterations are not made intentionally.

Attributes of GeneticAlteration

  The following are all the attributes of the GeneticAlteration object and their data types:

        observation     string
        methodOfObservation     string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of GeneticAlteration

  The following are all the objects that are associated with the GeneticAlteration:

  End Associations and related methods


GeneFunction

  CaCORE::CaMOD::GeneFunction - Perl extension for GeneFunction.

Abstract

  The CaCORE::CaMOD::bean::GeneFunction is a Perl object representation of the
  caBIO generic object.

Description

  Functions of the engineered genes.

Attributes of GeneFunction

  The following are all the attributes of the GeneFunction object and their data types:

        function        string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of GeneFunction

  The following are all the objects that are associated with the GeneFunction:

	EngineeredGene: 	Many to one assoication, use getEngineeredGene to get the associated EngineeredGene.
  End Associations and related methods


GeneDelivery

  CaCORE::CaMOD::GeneDelivery - Perl extension for GeneDelivery.

Abstract

  The CaCORE::CaMOD::bean::GeneDelivery is a Perl object representation of the
  caBIO generic object.

Description

  Gene is delivered to specific organs or specific receptors within the animal model. using viral vectors

Attributes of GeneDelivery

  The following are all the attributes of the GeneDelivery object and their data types:

        viralVector     string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of GeneDelivery

  The following are all the objects that are associated with the GeneDelivery:

	EngineeredGene: 	Many to one assoication, use getEngineeredGene to get the associated EngineeredGene.
  End Associations and related methods


ContactInfo

  CaCORE::CaMOD::ContactInfo - Perl extension for ContactInfo.

Abstract

  The CaCORE::CaMOD::bean::ContactInfo is a Perl object representation of the
  caBIO generic object.

Description

  Information regarding the person who submitted the data.

Attributes of ContactInfo

  The following are all the attributes of the ContactInfo object and their data types:

        faxNumber       string
        zipCode string
        street  string
        institute       string
        state   string
        email   string
        phoneNumber     string
        labName string
        id      long
        city    string
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of ContactInfo

  The following are all the objects that are associated with the ContactInfo:

	Party: 	One to many assoication, use getPartyCollection to get a collection of associated Party.
  End Associations and related methods


CellLine

  CaCORE::CaMOD::CellLine - Perl extension for CellLine.

Abstract

  The CaCORE::CaMOD::bean::CellLine is a Perl object representation of the
  caBIO generic object.

Description

  Cell lines generated from the animal model.

Attributes of CellLine

  The following are all the attributes of the CellLine object and their data types:

        experiment      string
        comments        string
        name    string
        results string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of CellLine

  The following are all the objects that are associated with the CellLine:

	Publication: 	One to many assoication, use getPublicationCollection to get a collection of associated Publication.
  End Associations and related methods


CarcinogenicIntervention

  CaCORE::CaMOD::CarcinogenicIntervention - Perl extension for CarcinogenicIntervention.

Abstract

  The CaCORE::CaMOD::bean::CarcinogenicIntervention is a Perl object representation of the
  caBIO generic object.

Description

  Treatment or procedure that the animal model was exposed to in order to initiate or support the development of neoplastic lesions.

Attributes of CarcinogenicIntervention

  The following are all the attributes of the CarcinogenicIntervention object and their data types:

        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of CarcinogenicIntervention

  The following are all the objects that are associated with the CarcinogenicIntervention:

	EnvironmentalFactor: 	Many to one assoication, use getEnvironmentalFactor to get the associated EnvironmentalFactor.
	TreatmentSchedule: 	Many to one assoication, use getTreatmentSchedule to get the associated TreatmentSchedule.
  End Associations and related methods


AnimalModel

  CaCORE::CaMOD::AnimalModel - Perl extension for AnimalModel.

Abstract

  The CaCORE::CaMOD::bean::AnimalModel is a Perl object representation of the
  caBIO generic object.

Description

  An animal model which develops cancer or can be used to generate a model that develops cancer.

Attributes of AnimalModel

  The following are all the attributes of the AnimalModel object and their data types:

        url     string
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of AnimalModel

  The following are all the objects that are associated with the AnimalModel:

	Phenotype: 	Many to one assoication, use getPhenotype to get the associated Phenotype.
	CarcinogenicIntervention: 	One to many assoication, use getCarcinogenicInterventionCollection to get a collection of associated CarcinogenicIntervention.
	Therapy: 	One to many assoication, use getTherapyCollection to get a collection of associated Therapy.
	Image: 	One to many assoication, use getImageCollection to get a collection of associated Image.
	Xenograft: 	One to many assoication, use getXenograftCollection to get a collection of associated Xenograft.
	MicroArrayData: 	One to many assoication, use getMicroArrayDataCollection to get a collection of associated MicroArrayData.
	TargetedModification: 	One to many assoication, use getTargetedModificationCollection to get a collection of associated TargetedModification.
	GenomicSegment: 	One to many assoication, use getGenomicSegmentCollection to get a collection of associated GenomicSegment.
	RepositoryInfo: 	Many to one assoication, use getRepositoryInfo to get the associated RepositoryInfo.
	Histopathology: 	One to many assoication, use getHistopathologyCollection to get a collection of associated Histopathology.
	CellLine: 	One to many assoication, use getCellLineCollection to get a collection of associated CellLine.
	Transgene: 	One to many assoication, use getTransgeneCollection to get a collection of associated Transgene.
	JaxInfo: 	Many to one assoication, use getJaxInfo to get the associated JaxInfo.
	InducedMutation: 	One to many assoication, use getInducedMutationCollection to get a collection of associated InducedMutation.
  End Associations and related methods


EndpointCode

  CaCORE::CaMOD::EndpointCode - Perl extension for EndpointCode.

Abstract

  The CaCORE::CaMOD::bean::EndpointCode is a Perl object representation of the
  caBIO generic object.

Description

  A endpoint code captures the parameter for measuring success of anti-drug screen test; mean tumor weightm median survival time, etc.

Attributes of EndpointCode

  The following are all the attributes of the EndpointCode object and their data types:

        code    string
        description     string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of EndpointCode

  The following are all the objects that are associated with the EndpointCode:

  End Associations and related methods


ScreeningResult

  CaCORE::CaMOD::ScreeningResult - Perl extension for ScreeningResult.

Abstract

  The CaCORE::CaMOD::bean::ScreeningResult is a Perl object representation of the
  caBIO generic object.

Description

  A Screening Result captures the results of the tens of thousands of compounds screened for their ability to inhibit the growth of selected yeast strains altered in DNA damage repair or cell cycle control.

Attributes of ScreeningResult

  The following are all the attributes of the ScreeningResult object and their data types:

        diffinh float
        aveinh  float
        stage   string
        id      long
        inhibitionRate  float
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of ScreeningResult

  The following are all the objects that are associated with the ScreeningResult:

	TreatmentSchedule: 	Many to one assoication, use getTreatmentSchedule to get the associated TreatmentSchedule.
	Agent: 	Many to one assoication, use getAgent to get the associated Agent.
  End Associations and related methods


InvivoResult

  CaCORE::CaMOD::InvivoResult - Perl extension for InvivoResult.

Abstract

  The CaCORE::CaMOD::bean::InvivoResult is a Perl object representation of the
  caBIO generic object.

Description

  An Invivo Result captures the results of anti-tumor drug screening.

Attributes of InvivoResult

  The following are all the attributes of the InvivoResult object and their data types:

        toxicityEvalDay string
        evaluationDay   string
        toxicitySurvivors       string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of InvivoResult

  The following are all the objects that are associated with the InvivoResult:

	TreatmentSchedule: 	Many to one assoication, use getTreatmentSchedule to get the associated TreatmentSchedule.
	Agent: 	Many to one assoication, use getAgent to get the associated Agent.
	EndpointCode: 	Many to one assoication, use getEndpointCode to get the associated EndpointCode.
  End Associations and related methods


ModificationType

  CaCORE::CaMOD::ModificationType - Perl extension for ModificationType.

Abstract

  The CaCORE::CaMOD::bean::ModificationType is a Perl object representation of the
  caBIO generic object.

Description

  

Attributes of ModificationType

  The following are all the attributes of the ModificationType object and their data types:

        name    string
        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of ModificationType

  The following are all the objects that are associated with the ModificationType:

	TargetedModification: 	One to many assoication, use getTargetedModificationCollection to get a collection of associated TargetedModification.
  End Associations and related methods


ExpressionFeature

  CaCORE::CaMOD::ExpressionFeature - Perl extension for ExpressionFeature.

Abstract

  The CaCORE::CaMOD::bean::ExpressionFeature is a Perl object representation of the
  caBIO generic object.

Description

  The expression feature object describes expression pattern of the engineered gene in the cancer model.

Attributes of ExpressionFeature

  The following are all the attributes of the ExpressionFeature object and their data types:

        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of ExpressionFeature

  The following are all the objects that are associated with the ExpressionFeature:

	OrganOntology: 	One to many assoication, use getOrganOntologyCollection to get a collection of associated OrganOntology.
  End Associations and related methods


CancerModel

  CaCORE::CaMOD::CancerModel - Perl extension for CancerModel.

Abstract

  The CaCORE::CaMOD::bean::CancerModel is a Perl object representation of the
  caBIO generic object.

Description

  

Attributes of CancerModel

  The following are all the attributes of the CancerModel object and their data types:

        id      long
  End Attributes
  Note: Although you can also use the corresponding setter methods to set the
  attribute values, it is not recommended to do so unless you absolutely have
  to change the object's attributes.

Associations of CancerModel

  The following are all the objects that are associated with the CancerModel:

  End Associations and related methods