Calls | P | F | Exclusive Time |
Inclusive Time |
Subroutine |
---|---|---|---|---|---|
39725 | 3 | 1 | 4.11s | 4.11s | CORE:readline (opcode) | Bio::Roary::SplitGroups::
72819 | 3 | 2 | 3.63s | 5.15s | _count_num_files_in_group | Bio::Roary::AnalyseGroups::
18216 | 1 | 1 | 3.60s | 4.56s | _combine | Text::CSV_PP::
10 | 1 | 1 | 3.38s | 3.58s | _single_iteration_gene_expansion | Bio::Roary::Output::NumberOfGroups::
2 | 1 | 1 | 2.24s | 3.25s | _build__groups_to_files | Bio::Roary::Output::EmblGroups::
1587215 | 5 | 4 | 2.12s | 2.12s | _genes_to_file | Bio::Roary::AnalyseGroups::
18216 | 1 | 1 | 2.06s | 2.06s | CORE:print (opcode) | IO::Handle::
32985 | 1 | 1 | 1.95s | 3.05s | _ids_grouped_by_gene_name_for_group | Bio::Roary::AnnotateGroups::
18215 | 1 | 1 | 1.73s | 8.87s | _row | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 1.05s | 1.52s | _build__groups_to_files | Bio::Roary::GroupStatistics::
640518 | 2 | 1 | 1.05s | 2.88s | _ids_to_gene_names | Bio::Roary::AnnotateGroups::
18215 | 1 | 1 | 973ms | 1.38s | consensus_product_for_id_names | Bio::Roary::AnnotateGroups::
149260 | 6 | 1 | 959ms | 959ms | CORE:readline (opcode) | Bio::Roary::AnalyseGroups::
8 | 1 | 1 | 877ms | 1.40s | _build_contig_to_ids | Bio::Roary::ContigsToGeneIDsFromGFF::
8 | 1 | 1 | 855ms | 1.66s | _build_ids_to_gene_name | Bio::Roary::GeneNamesFromGFF::
31 | 1 | 1 | 835ms | 985ms | _update_genes_to_groups | Bio::Roary::SplitGroups::
36430 | 1 | 1 | 811ms | 4.46s | _block | Bio::Roary::Output::EmblGroups::
18277 | 2 | 1 | 746ms | 3.73s | _find_paralogs | Bio::Roary::SplitGroups::
24876 | 1 | 1 | 617ms | 858ms | _edges | Graph::
36430 | 1 | 1 | 559ms | 872ms | _header_block | Bio::Roary::Output::EmblGroups::
2 | 1 | 1 | 543ms | 3.18s | _builder__freq_groups_per_genome | Bio::Roary::AnalyseGroups::
307386 | 12 | 3 | 522ms | 786ms | _groups_to_id_names | Bio::Roary::AnnotateGroups::
673202 | 4 | 1 | 516ms | 516ms | CORE:regcomp (opcode) | Text::CSV_PP::
8 | 1 | 1 | 499ms | 499ms | CORE:system (opcode) | Bio::Roary::SplitGroups::
2 | 2 | 1 | 469ms | 6.50s | create_files | Bio::Roary::Output::EmblGroups::
10013 | 1 | 1 | 459ms | 2.58s | next | Graph::Traversal::
1 | 1 | 1 | 452ms | 17.9s | create_spreadsheet | Bio::Roary::GroupStatistics::
288586 | 2 | 1 | 436ms | 436ms | analyse_groups_obj | Bio::Roary::Output::EmblGroups::
40016 | 2 | 1 | 407ms | 407ms | CORE:readline (opcode) | Bio::Roary::GeneNamesFromGFF::
1 | 1 | 1 | 401ms | 2.45s | _build__groups_to_file_contigs | Bio::Roary::OrderGenes::
288585 | 3 | 1 | 401ms | 401ms | _ids_to_product | Bio::Roary::AnnotateGroups::
2 | 1 | 1 | 389ms | 1.32s | _builder__files_to_genes | Bio::Roary::AnalyseGroups::
2 | 1 | 1 | 389ms | 460ms | _builder__groups_to_genes | Bio::Roary::AnalyseGroups::
24876 | 1 | 1 | 381ms | 1.42s | _successors | Graph::AdjacencyMap::
18215 | 1 | 1 | 375ms | 2.11s | _non_unique_name_for_group | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 354ms | 56.9s | run | Bio::Roary::CommandLine::RoaryPostAnalysis::
51203 | 5 | 1 | 348ms | 572ms | CORE:sort (opcode) | Bio::Roary::AnnotateGroups::
19958 | 1 | 1 | 341ms | 505ms | _set_path_attr | Graph::AdjacencyMap::
312 | 4 | 1 | 337ms | 337ms | CORE:open (opcode) | Bio::Roary::SplitGroups::
32985 | 2 | 2 | 319ms | 3.39s | _consensus_gene_name_for_group | Bio::Roary::AnnotateGroups::
8 | 1 | 1 | 314ms | 470ms | _build_overlapping_hypothetical_protein_ids | Bio::Roary::ContigsToGeneIDsFromGFF::
2 | 1 | 1 | 314ms | 505ms | _fragment_blocks | Bio::Roary::Output::EmblGroups::
29935 | 4 | 2 | 312ms | 1.88s | add_edge | Graph::
163936 | 3 | 1 | 303ms | 1.82s | _groups_to_files | Bio::Roary::GroupStatistics::
48485 | 1 | 1 | 298ms | 417ms | _same_group | Bio::Roary::SplitGroups::
145721 | 6 | 3 | 273ms | 273ms | _groups_to_consensus_gene_names | Bio::Roary::AnnotateGroups::
191147 | 11 | 1 | 271ms | 271ms | groups_to_contigs | Bio::Roary::Output::EmblGroups::
120024 | 3 | 1 | 270ms | 270ms | CORE:match (opcode) | Bio::Roary::GeneNamesFromGFF::
97033 | 5 | 1 | 270ms | 270ms | _genes_to_groups | Bio::Roary::SplitGroups::
180723 | 4 | 1 | 269ms | 269ms | analyse_groups_obj | Bio::Roary::GroupStatistics::
18216 | 2 | 1 | 264ms | 7.02s | |
40016 | 2 | 1 | 255ms | 255ms | CORE:readline (opcode) | Bio::Roary::ContigsToGeneIDsFromGFF::
144209 | 4 | 1 | 254ms | 254ms | CORE:match (opcode) | Bio::Roary::ContigsToGeneIDsFromGFF::
34963 | 3 | 2 | 253ms | 276ms | has_edge | Graph::
24934 | 1 | 1 | 241ms | 491ms | add_vertex | Graph::
145219 | 2 | 1 | 231ms | 2.99s | _genes_to_files | Bio::Roary::SplitGroups::
29935 | 1 | 1 | 231ms | 721ms | _add_edge | Graph::
34911 | 2 | 1 | 226ms | 236ms | set_path | Graph::AdjacencyMap::Light::
1 | 1 | 1 | 224ms | 239ms | _set_genes_to_groups | Bio::Roary::SplitGroups::
673200 | 2 | 1 | 224ms | 224ms | CORE:subst (opcode) | Text::CSV_PP::
19958 | 2 | 1 | 222ms | 1.50s | set_edge_attribute | Graph::
673206 | 4 | 1 | 218ms | 218ms | CORE:match (opcode) | Text::CSV_PP::
145726 | 7 | 1 | 218ms | 218ms | annotate_groups_obj | Bio::Roary::Output::EmblGroups::
1 | 1 | 1 | 216ms | 250ms | _generate__ids_to_groups | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 210ms | 10.5s | split_groups | Bio::Roary::SplitGroups::
1 | 1 | 1 | 208ms | 263ms | _builder__groups_to_id_names | Bio::Roary::AnnotateGroups::
124062 | 9 | 1 | 205ms | 205ms | annotate_groups_obj | Bio::Roary::GroupStatistics::
19958 | 1 | 1 | 195ms | 592ms | set_path | Graph::AdjacencyMap::Heavy::
1 | 1 | 1 | 195ms | 3.34s | reannotate | Bio::Roary::AnnotateGroups::
70075 | 4 | 2 | 193ms | 251ms | multiedged | Graph::
1 | 1 | 1 | 192ms | 2.78s | _generate_groups_to_consensus_gene_names | Bio::Roary::AnnotateGroups::
19958 | 1 | 1 | 176ms | 176ms | __set_path | Graph::AdjacencyMap::Heavy::
2 | 2 | 1 | 170ms | 4.11s | _reorder_connected_components | Bio::Roary::OrderGenes::
1 | 1 | 1 | 168ms | 200ms | _build__files_to_groups | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 163ms | 1.83s | _build__ids_to_gene_names | Bio::Roary::AnnotateGroups::
24965 | 3 | 2 | 154ms | 162ms | __attr | Graph::AdjacencyMap::Heavy::
24965 | 2 | 1 | 152ms | 152ms | _vertex_ids | Graph::
120016 | 4 | 1 | 151ms | 151ms | _genes_annotation | Bio::Roary::ContigsToGeneIDsFromGFF::
309 | 1 | 1 | 148ms | 4.65s | _parse_gene_neighbourhood | Bio::Roary::SplitGroups::
19958 | 1 | 1 | 145ms | 203ms | __set_path_node | Graph::AdjacencyMap::Heavy::
49752 | 2 | 1 | 140ms | 140ms | _get_path_id | Graph::AdjacencyMap::Light::
1 | 1 | 1 | 140ms | 220ms | add_labels | Bio::Roary::GroupLabels::
15003 | 3 | 1 | 139ms | 2.07s | add_weighted_edge | Graph::
50238 | 2 | 2 | 137ms | 137ms | _get_id_path | Graph::AdjacencyMap::Light::
494 | 1 | 1 | 125ms | 542ms | _shared_cgn_score | Bio::Roary::SplitGroups::
1 | 1 | 1 | 102ms | 3.95s | _add_groups_to_graph | Bio::Roary::OrderGenes::
39968 | 3 | 1 | 99.7ms | 250ms | expect_non_multiedged | Graph::
60770 | 6 | 1 | 97.7ms | 97.7ms | groups_to_contigs | Bio::Roary::GroupStatistics::
36389 | 1 | 1 | 94.6ms | 94.6ms | CORE:subst (opcode) | Bio::Roary::AnalyseGroups::
56792 | 7 | 1 | 94.3ms | 94.3ms | ordering_key | Bio::Roary::Output::EmblGroups::
435 | 1 | 1 | 93.2ms | 93.2ms | _clean_eval | Eval::Closure::
1 | 1 | 1 | 91.5ms | 6.59s | _create_embl_files | Bio::Roary::PostAnalysis::
40016 | 2 | 2 | 88.3ms | 88.3ms | ids_to_product | Bio::Roary::GeneNamesFromGFF::
54871 | 3 | 1 | 87.9ms | 87.9ms | has_union_find | Graph::
1 | 1 | 1 | 85.9ms | 172ms | inflate | Bio::Roary::InflateClusters::
1 | 1 | 1 | 85.8ms | 193ms | _create_accessory_graph | Bio::Roary::OrderGenes::
1 | 1 | 1 | 85.1ms | 2.53s | _build_group_order | Bio::Roary::OrderGenes::
36 | 1 | 1 | 84.6ms | 1.79s | _heap_walk | Graph::
24876 | 2 | 2 | 83.3ms | 1.50s | successors | Graph::
9975 | 1 | 1 | 82.8ms | 124ms | visit | Graph::Traversal::
18216 | 1 | 1 | 82.5ms | 2.14s | |
2 | 2 | 1 | 80.3ms | 80.3ms | CORE:sort (opcode) | Bio::Roary::GroupStatistics::
40161 | 16 | 1 | 78.3ms | 2.61s | group_order | Bio::Roary::OrderGenes::
8 | 5 | 2 | 77.7ms | 77.8ms | _groups | Bio::Roary::AnnotateGroups::
39736 | 1 | 1 | 76.7ms | 3.32s | _groups_to_files | Bio::Roary::Output::EmblGroups::
24914 | 2 | 1 | 74.9ms | 102ms | omniedged | Graph::
36438 | 5 | 1 | 73.6ms | 74.1ms | _output_header_fh | Bio::Roary::Output::EmblGroups::
36432 | 2 | 1 | 72.1ms | 72.5ms | _output_fh | Bio::Roary::Output::EmblGroups::
9975 | 1 | 1 | 72.0ms | 115ms | visit_postorder | Graph::Traversal::
4438 | 1 | 1 | 69.8ms | 81.9ms | consolidate | Heap071::Fibonacci::
4991 | 2 | 1 | 69.3ms | 861ms | _MST_add | Graph::
36389 | 1 | 1 | 68.3ms | 68.3ms | _number_of_isolates | Bio::Roary::AnalyseGroups::
24972 | 2 | 1 | 67.9ms | 79.1ms | multivertexed | Graph::
18246 | 2 | 1 | 66.5ms | 3.79s | _contains_paralogs | Bio::Roary::SplitGroups::
37678 | 1 | 1 | 66.1ms | 536ms | overlapping_hypothetical_protein_ids | Bio::Roary::ContigsToGeneIDsFromGFF::
9975 | 1 | 1 | 63.3ms | 187ms | visit_preorder | Graph::Traversal::
5007 | 1 | 1 | 62.8ms | 325ms | get_edge_attribute | Graph::
5007 | 1 | 1 | 60.5ms | 146ms | _get_path_attr | Graph::AdjacencyMap::
54653 | 4 | 1 | 57.9ms | 57.9ms | CORE:match (opcode) | Bio::Roary::AnnotateGroups::
5007 | 1 | 1 | 57.7ms | 154ms | extract_top | Heap071::Fibonacci::
1 | 1 | 1 | 57.5ms | 102ms | BEGIN@22 | Bio::Roary::OrderGenes::
5007 | 1 | 1 | 55.7ms | 117ms | add | Heap071::Fibonacci::
40008 | 1 | 1 | 54.5ms | 54.5ms | analyse_groups_obj | Bio::Roary::OrderGenes::
40010 | 2 | 2 | 53.8ms | 53.8ms | _genes_to_groups | Bio::Roary::AnalyseGroups::
59852 | 1 | 1 | 53.1ms | 53.1ms | _is_MULTI | Graph::AdjacencyMap::
18216 | 1 | 1 | 51.2ms | 51.2ms | _string | Text::CSV_PP::
18216 | 2 | 1 | 50.7ms | 51.0ms | _text_csv_obj | Bio::Roary::GroupStatistics::
36389 | 1 | 1 | 49.5ms | 49.5ms | CORE:match (opcode) | Bio::Roary::AnalyseGroups::
14965 | 1 | 1 | 48.0ms | 48.0ms | _new_node | Graph::AdjacencyMap::
5007 | 1 | 1 | 47.0ms | 48.8ms | __get_path_node | Graph::AdjacencyMap::
24876 | 1 | 1 | 45.3ms | 45.3ms | _edges_from | Graph::
37683 | 2 | 1 | 44.9ms | 44.9ms | CORE:subst (opcode) | Bio::Roary::Output::EmblGroups::
18226 | 3 | 2 | 44.0ms | 44.1ms | _sorted_file_names | Bio::Roary::GroupStatistics::
18217 | 3 | 1 | 42.5ms | 43.0ms | _output_fh | Bio::Roary::GroupStatistics::
18216 | 2 | 1 | 41.8ms | 41.8ms | _verbose | Bio::Roary::GroupStatistics::
18216 | 2 | 2 | 40.3ms | 40.3ms | _group_default_prefix | Bio::Roary::AnnotateGroups::
9975 | 1 | 1 | 36.9ms | 36.9ms | _callbacks | Graph::Traversal::
31 | 2 | 1 | 34.8ms | 6.22s | _true_orthologs (recurses: max depth 1, inclusive time 717ms) | Bio::Roary::SplitGroups::
72872 | 5 | 1 | 32.2ms | 32.2ms | CORE:print (opcode) | Bio::Roary::Output::EmblGroups::
9975 | 1 | 1 | 31.9ms | 42.7ms | __ANON__[Graph/Traversal.pm:26] | Graph::Traversal::
19885 | 1 | 1 | 31.9ms | 31.9ms | current | Graph::Traversal::DFS::
18216 | 2 | 1 | 31.9ms | 32.2ms | _output_fh | Bio::Roary::GroupLabels::
5007 | 1 | 1 | 31.8ms | 39.5ms | elem | Heap071::Fibonacci::
319 | 4 | 2 | 31.6ms | 42.9ms | fileparse | File::Basename::
1 | 1 | 1 | 31.3ms | 9.70s | _build_groups_to_contigs | Bio::Roary::OrderGenes::
18215 | 1 | 1 | 29.3ms | 29.3ms | ceil (xsub) | POSIX::
18216 | 2 | 1 | 28.3ms | 28.7ms | _output_fh | Bio::Roary::AnnotateGroups::
18215 | 1 | 1 | 28.0ms | 28.0ms | _group_default_prefix | Bio::Roary::GroupLabels::
18175 | 3 | 1 | 27.8ms | 28.2ms | _output_fh | Bio::Roary::InflateClusters::
24952 | 2 | 1 | 27.1ms | 27.1ms | _is_UNORD | Graph::AdjacencyMap::
49930 | 4 | 1 | 27.1ms | 27.1ms | CORE:sort (opcode) | Graph::AdjacencyMap::
44923 | 2 | 1 | 26.7ms | 26.7ms | CORE:sort (opcode) | Graph::AdjacencyMap::Heavy::
15112 | 4 | 1 | 26.6ms | 26.6ms | number_of_files | Bio::Roary::OrderGenes::
19988 | 2 | 1 | 26.3ms | 26.3ms | seeing | Graph::Traversal::
67827 | 2 | 1 | 25.8ms | 25.8ms | CORE:subst (opcode) | Bio::Roary::GeneNamesFromGFF::
61 | 61 | 60 | 25.8ms | 75.4ms | import (recurses: max depth 3, inclusive time 30.6ms) | base::
2 | 1 | 1 | 25.5ms | 1.40s | _connected_components_compute | Graph::
1285 | 11 | 7 | 24.9ms | 444ms | try (recurses: max depth 3, inclusive time 518ms) | Try::Tiny::
10011 | 4 | 2 | 24.5ms | 24.5ms | _next_random | Graph::
15177 | 4 | 1 | 24.3ms | 24.3ms | is_compat02 | Graph::
13905 | 9 | 1 | 23.7ms | 23.7ms | link_to_left_of | Heap071::Fibonacci::
4967 | 1 | 1 | 23.7ms | 27.5ms | _annotation_type | Bio::Roary::Output::EmblGroups::
20 | 3 | 1 | 23.5ms | 23.5ms | CORE:open (opcode) | Bio::Roary::AnalyseGroups::
38 | 1 | 1 | 23.2ms | 2.60s | _order | Graph::Traversal::
26277 | 1 | 1 | 22.7ms | 22.7ms | CORE:sort (opcode) | Graph::
1 | 1 | 1 | 22.5ms | 30.0ms | _build__clustered_genes | Bio::Roary::ClustersRole::
9975 | 1 | 1 | 22.5ms | 22.5ms | add_order | Graph::Traversal::
32985 | 2 | 1 | 22.1ms | 22.1ms | CORE:match (opcode) | Bio::Roary::GroupStatistics::
190 | 2 | 2 | 21.9ms | 67.0ms | new | Moose::Meta::Attribute::
656 | 21 | 8 | 20.8ms | 53.7ms | add_method | Class::MOP::Mixin::HasMethods::
2 | 2 | 2 | 20.0ms | 21.0ms | SWASHNEW | utf8::
4991 | 1 | 1 | 18.7ms | 18.7ms | __ANON__[Graph.pm:2754] | Graph::
76 | 3 | 1 | 18.5ms | 34.7ms | vertices05 | Graph::
9768 | 2 | 1 | 17.2ms | 17.6ms | group_graphs | Bio::Roary::OrderGenes::
5007 | 1 | 1 | 17.0ms | 17.0ms | new | Graph::MSTHeapElem::
210 | 2 | 1 | 16.9ms | 16.9ms | paths | Graph::AdjacencyMap::Light::
11815 | 3 | 1 | 16.8ms | 16.8ms | cmp | Graph::MSTHeapElem::
8 | 1 | 1 | 16.6ms | 16.6ms | CORE:open (opcode) | Bio::Roary::GeneNamesFromGFF::
35195 | 2 | 1 | 15.8ms | 15.8ms | _is_MULTI (xsub) | Graph::AdjacencyMap::Light::
8 | 1 | 1 | 15.5ms | 15.5ms | CORE:open (opcode) | Bio::Roary::ContigsToGeneIDsFromGFF::
10014 | 2 | 1 | 14.6ms | 14.6ms | heap | Heap071::Elem::
1956 | 1 | 1 | 14.1ms | 22.0ms | _set_initial_slot_value | Class::MOP::Attribute::
2896 | 21 | 12 | 13.9ms | 50.0ms | initialize (recurses: max depth 2, inclusive time 990µs) | Class::MOP::Class::
1 | 1 | 1 | 13.7ms | 23.6ms | _remove_weak_edges_from_graph | Bio::Roary::OrderGenes::
32985 | 2 | 1 | 13.5ms | 13.5ms | CORE:regcomp (opcode) | Bio::Roary::GroupStatistics::
464 | 6 | 2 | 12.8ms | 302ms | _process_accessors | Class::MOP::Attribute::
18216 | 2 | 1 | 12.2ms | 12.2ms | CORE:readline (opcode) | Bio::Roary::AnnotateGroups::
4975 | 2 | 1 | 11.5ms | 11.5ms | _block_colour | Bio::Roary::Output::EmblGroups::
333 | 126 | 23 | 11.5ms | 367ms | add_attribute | Class::MOP::Mixin::HasAttributes::
395 | 8 | 4 | 11.2ms | 21.8ms | get_all_attributes | Class::MOP::Class::
271 | 2 | 1 | 11.0ms | 59.8ms | _construct_instance | Class::MOP::Class::
4967 | 1 | 1 | 10.8ms | 10.9ms | _sorted_file_names | Bio::Roary::Output::EmblGroups::
396 | 3 | 2 | 10.8ms | 374ms | install_accessors | Class::MOP::Attribute::
9975 | 1 | 1 | 10.8ms | 10.8ms | see | Graph::Traversal::DFS::
18216 | 2 | 1 | 10.6ms | 10.6ms | CORE:readline (opcode) | Bio::Roary::GroupLabels::
38 | 1 | 1 | 10.4ms | 36.7ms | reset | Graph::Traversal::
1417 | 6 | 3 | 10.3ms | 16.4ms | can_be_inlined (recurses: max depth 1, inclusive time 16µs) | Moose::Meta::TypeConstraint::
3066 | 1 | 1 | 10.2ms | 10.2ms | CORE:subst (opcode) | Bio::Roary::SplitGroups::
2437 | 1 | 1 | 9.98ms | 34.3ms | initialize_instance_slot | Class::MOP::Attribute::
9977 | 1 | 1 | 9.81ms | 9.81ms | CORE:sort (opcode) | Graph::AdjacencyMap::Light::
394 | 2 | 2 | 9.70ms | 260ms | new | Class::MOP::Method::Accessor::
4993 | 1 | 1 | 9.67ms | 9.67ms | _inc_node | Graph::AdjacencyMap::
216 | 189 | 115 | 9.65ms | 19.9ms | import | Exporter::
674 | 2 | 2 | 9.52ms | 10.5ms | add_symbol (xsub) | Package::Stash::XS::
1360 | 2 | 1 | 9.45ms | 29.4ms | _get_maybe_raw_method | Class::MOP::Mixin::HasMethods::
18215 | 1 | 1 | 9.43ms | 9.43ms | CORE:print (opcode) | Bio::Roary::AnnotateGroups::
18215 | 1 | 1 | 9.42ms | 9.42ms | CORE:print (opcode) | Bio::Roary::GroupLabels::
1 | 1 | 1 | 9.38ms | 30.3ms | BEGIN@18 | Class::MOP::
796 | 9 | 3 | 9.29ms | 25.1ms | _inline_check (recurses: max depth 2, inclusive time 15.7ms) | Moose::Meta::TypeConstraint::
18176 | 4 | 1 | 9.16ms | 9.16ms | CORE:readline (opcode) | Bio::Roary::InflateClusters::
5007 | 1 | 1 | 9.05ms | 9.05ms | val | Graph::MSTHeapElem::
4871 | 1 | 1 | 9.00ms | 9.00ms | has_vertex | Graph::
53 | 53 | 53 | 8.35ms | 27.3ms | import (recurses: max depth 2, inclusive time 5.10ms) | parent::
237 | 1 | 1 | 8.27ms | 14.0ms | BUILDARGS | Class::MOP::Instance::
207 | 1 | 1 | 8.15ms | 16.9ms | _eval_environment | Moose::Meta::Attribute::
5043 | 2 | 1 | 8.11ms | 8.11ms | top | Heap071::Fibonacci::
1 | 1 | 1 | 7.95ms | 16.2ms | BEGIN@75 | Bio::Root::IO::
3348 | 7 | 4 | 7.84ms | 7.84ms | subname (xsub) | Sub::Name::
435 | 1 | 1 | 7.83ms | 110ms | _clean_eval_closure | Eval::Closure::
1 | 1 | 1 | 7.60ms | 10.2ms | BEGIN@12 | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 7.49ms | 10.5ms | BEGIN@10 | Data::OptList::
18174 | 2 | 1 | 7.35ms | 7.35ms | CORE:print (opcode) | Bio::Roary::InflateClusters::
774 | 2 | 2 | 7.19ms | 28.2ms | _inline_instance_set | Class::MOP::Attribute::
314 | 1 | 1 | 7.00ms | 10.2ms | default_generator | Sub::Exporter::
92 | 2 | 1 | 6.93ms | 8.83ms | CORE:sort (opcode) | Class::MOP::Class::
4931 | 2 | 1 | 6.65ms | 6.65ms | _groups_qc | Bio::Roary::OrderGenes::
1 | 1 | 1 | 6.56ms | 7.52ms | _load_pp | Text::CSV::
369 | 2 | 1 | 6.53ms | 35.8ms | _inline_check_constraint | Moose::Meta::Attribute::
394 | 1 | 1 | 6.45ms | 272ms | try {...} | Class::MOP::Attribute::
435 | 2 | 2 | 6.41ms | 126ms | eval_closure | Eval::Closure::
329 | 2 | 1 | 6.41ms | 6.41ms | CORE:match (opcode) | File::Basename::
1 | 1 | 1 | 6.34ms | 125ms | BEGIN@8 | Moose::Exporter::
36430 | 2 | 1 | 6.29ms | 6.29ms | CORE:regcomp (opcode) | Bio::Roary::AnnotateGroups::
1203 | 1 | 1 | 6.25ms | 12.6ms | get_package_symbol | Class::MOP::Package::
13686 | 23 | 7 | 6.23ms | 6.23ms | name (xsub) | Class::MOP::Mixin::AttributeCore::
112 | 5 | 3 | 6.23ms | 16.6ms | new | Graph::
318 | 4 | 3 | 6.21ms | 60.6ms | _inline_set_value | Moose::Meta::Attribute::
1889 | 7 | 2 | 6.17ms | 6.23ms | _method_map (xsub) | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 6.14ms | 97.4ms | BEGIN@8 | Moose::Meta::TypeCoercion::
469 | 2 | 2 | 6.00ms | 73.9ms | _inline_slot_initializer | Class::MOP::Class::
190 | 1 | 1 | 5.96ms | 27.2ms | _process_options | Moose::Meta::Attribute::
1 | 1 | 1 | 5.92ms | 141ms | BEGIN@15 | Moose::
5250 | 2 | 1 | 5.88ms | 5.88ms | CORE:match (opcode) | Bio::Roary::ClustersRole::
320 | 54 | 4 | 5.85ms | 13.7ms | new | Class::MOP::Attribute::
1 | 1 | 1 | 5.80ms | 6.29ms | BEGIN@10 | Moose::
18215 | 1 | 1 | 5.74ms | 5.74ms | CORE:print (opcode) | Bio::Roary::SplitGroups::
15 | 15 | 15 | 5.73ms | 5.73ms | load | XSLoader::
1 | 1 | 1 | 5.73ms | 77.3ms | BEGIN@16 | Moose::Meta::Attribute::
362 | 7 | 4 | 5.70ms | 166ms | _compile_code | Class::MOP::Method::Generated::
36 | 1 | 1 | 5.68ms | 13.6ms | _root_opt | Graph::
993 | 11 | 8 | 5.65ms | 33.8ms | get_method | Class::MOP::Mixin::HasMethods::
390 | 1 | 1 | 5.64ms | 10.7ms | _single_metaclass_can_be_made_compatible | Class::MOP::Class::
14 | 1 | 1 | 5.51ms | 8.00ms | heavy_export | Exporter::Heavy::
464 | 3 | 3 | 5.45ms | 47.8ms | _new | Class::MOP::Method::Accessor::
233 | 4 | 4 | 5.37ms | 21.7ms | wrap | Class::MOP::Method::
1 | 1 | 1 | 5.35ms | 6.63ms | BEGIN@191 | Bio::Tools::CodonTable::
1 | 1 | 1 | 5.34ms | 6.48ms | BEGIN@146 | Bio::Root::Root::
1 | 1 | 1 | 5.17ms | 6.77ms | BEGIN@10 | Moose::Util::MetaRole::
317 | 2 | 1 | 5.06ms | 7.96ms | STRINGIFY | File::Temp::Dir::
336 | 3 | 1 | 4.98ms | 4.98ms | _opt | Graph::
1 | 1 | 1 | 4.96ms | 20.8ms | BEGIN@24 | Moose::
189 | 1 | 1 | 4.92ms | 5.38ms | _new | Moose::Meta::Attribute::
485 | 1 | 1 | 4.90ms | 37.0ms | _inflate_gene | Bio::Roary::InflateClusters::
464 | 2 | 1 | 4.81ms | 5.74ms | _accessor_description | Class::MOP::Attribute::
317 | 2 | 1 | 4.79ms | 4.79ms | CORE:qr (opcode) | Bio::Roary::SplitGroups::
1947 | 1 | 1 | 4.75ms | 5.60ms | slots | Class::MOP::Attribute::
1 | 1 | 1 | 4.68ms | 4.96ms | AUTOLOAD | utf8::
222 | 5 | 4 | 4.67ms | 5.77ms | mkopt | Data::OptList::
1 | 1 | 1 | 4.47ms | 91.2ms | BEGIN@19 | Bio::Roary::GeneNamesFromGFF::
5083 | 41 | 23 | 4.45ms | 4.45ms | blessed (xsub) | Scalar::Util::
309 | 1 | 1 | 4.44ms | 4.44ms | _neighbourhood_size | Bio::Roary::SplitGroups::
1 | 1 | 1 | 4.43ms | 9.90ms | BEGIN@14 | Bio::Roary::CommandLine::RoaryPostAnalysis::
323 | 5 | 3 | 4.41ms | 11.6ms | __ANON__[Sub/Install.pm:132] | Sub::Install::
435 | 1 | 1 | 4.36ms | 5.73ms | _validate_env | Eval::Closure::
344 | 173 | 17 | 4.35ms | 705ms | has | Moose::
1956 | 1 | 1 | 4.35ms | 4.35ms | set_slot_value | Class::MOP::Instance::
1307 | 1 | 1 | 4.34ms | 12.2ms | __ANON__[Class/MOP/Method/Wrapped.pm:158] | Class::MOP::Method::Wrapped::
207 | 4 | 1 | 4.32ms | 258ms | _process_accessors | Moose::Meta::Attribute::
3050 | 8 | 4 | 4.32ms | 4.32ms | has_initializer | Class::MOP::Mixin::AttributeCore::
394 | 1 | 1 | 4.25ms | 203ms | _initialize_body | Class::MOP::Method::Accessor::
323 | 1 | 1 | 4.25ms | 5.85ms | __ANON__[Sub/Install.pm:175] | Sub::Install::
317 | 2 | 1 | 4.25ms | 4.25ms | _gene_files_temp_dir_obj | Bio::Roary::SplitGroups::
16 | 1 | 1 | 4.22ms | 14.9ms | _eval_environment | Moose::Meta::Class::
1285 | 11 | 7 | 4.18ms | 4.18ms | catch | Try::Tiny::
1203 | 1 | 1 | 4.17ms | 4.86ms | get_symbol (xsub) | Package::Stash::XS::
320 | 1 | 1 | 4.15ms | 343ms | _post_add_attribute | Class::MOP::Class::
3153 | 9 | 6 | 4.14ms | 4.14ms | get_metaclass_by_name | Class::MOP::
662 | 2 | 2 | 4.04ms | 15.3ms | add_package_symbol | Class::MOP::Package::
1 | 1 | 1 | 3.99ms | 4.74ms | BEGIN@22 | Bio::Roary::AnnotateGroups::
103 | 3 | 2 | 3.97ms | 33.3ms | require_module (recurses: max depth 1, inclusive time 34µs) | Module::Runtime::
317 | 1 | 1 | 3.92ms | 3.92ms | CORE:subst (opcode) | File::Basename::
2501 | 6 | 1 | 3.88ms | 4.75ms | _package_stash | Class::MOP::Package::
38 | 1 | 1 | 3.87ms | 20.7ms | vertices | Graph::
1 | 1 | 1 | 3.87ms | 4.05ms | BEGIN@9 | File::Find::Rule::
4967 | 1 | 1 | 3.86ms | 3.86ms | CORE:match (opcode) | Bio::Roary::Output::EmblGroups::
1307 | 1 | 1 | 3.80ms | 7.82ms | around | Class::MOP::Class:::
1 | 1 | 1 | 3.75ms | 26.1ms | BEGIN@3 | Bio::Root::Root::
658 | 2 | 1 | 3.73ms | 5.24ms | update_package_cache_flag | Class::MOP::Mixin::HasMethods::
3211 | 46 | 29 | 3.71ms | 3.71ms | isa (xsub) | UNIVERSAL::
444 | 5 | 4 | 3.70ms | 5.67ms | inline_environment (recurses: max depth 1, inclusive time 8µs) | Moose::Meta::TypeConstraint::
2684 | 4 | 1 | 3.67ms | 3.67ms | constraint | Moose::Meta::TypeConstraint::
189 | 2 | 2 | 3.63ms | 374ms | add_attribute | Moose::Meta::Class::
1 | 1 | 1 | 3.63ms | 4.54ms | BEGIN@7 | Eval::Closure::
6465 | 6 | 3 | 3.63ms | 3.63ms | init_arg (xsub) | Class::MOP::Mixin::AttributeCore::
1 | 1 | 1 | 3.60ms | 7.91ms | BEGIN@20 | Bio::Roary::GroupStatistics::
410 | 1 | 1 | 3.59ms | 40.6ms | _inflate_line | Bio::Roary::InflateClusters::
1 | 1 | 1 | 3.57ms | 3.60ms | BEGIN@5 | Graph::Traversal::DFS::
247 | 1 | 1 | 3.56ms | 546ms | _closest_cgn | Bio::Roary::SplitGroups::
2657 | 3 | 1 | 3.56ms | 3.56ms | has_parent | Moose::Meta::TypeConstraint::
271 | 1 | 1 | 3.56ms | 4.04ms | create_instance | Class::MOP::Instance::
435 | 1 | 1 | 3.46ms | 100ms | _make_compiler | Eval::Closure::
679 | 4 | 2 | 3.45ms | 5.34ms | linearized_isa | Class::MOP::Class::
435 | 1 | 1 | 3.44ms | 3.44ms | _make_compiler_source | Eval::Closure::
136 | 5 | 5 | 3.41ms | 20.5ms | find_method_by_name | Class::MOP::Class::
300 | 1 | 1 | 3.40ms | 179ms | try {...} | Class::MOP::Method::Accessor::
774 | 1 | 1 | 3.38ms | 5.42ms | inline_set_slot_value | Class::MOP::Instance::
362 | 1 | 1 | 3.31ms | 3.60ms | _generate_description | Class::MOP::Method::Generated::
1 | 1 | 1 | 3.29ms | 3.73ms | BEGIN@19 | Class::MOP::
435 | 1 | 1 | 3.28ms | 3.59ms | _canonicalize_source | Eval::Closure::
58 | 1 | 1 | 3.27ms | 30.8ms | _do_import | Sub::Exporter::
304 | 3 | 2 | 3.23ms | 3.23ms | bits | strict::
1137 | 5 | 1 | 3.18ms | 3.18ms | inline_slot_access | Class::MOP::Instance::
237 | 1 | 1 | 3.13ms | 20.1ms | new | Class::MOP::Instance::
1 | 1 | 1 | 3.12ms | 15.2ms | BEGIN@42 | Graph::
1 | 1 | 1 | 3.10ms | 18.8ms | BEGIN@32 | Moose::
237 | 1 | 1 | 3.05ms | 35.3ms | _create_meta_instance | Class::MOP::Class::
1 | 1 | 1 | 3.00ms | 3.64ms | _init_optags | Opcode::
1 | 1 | 1 | 2.99ms | 3.22ms | BEGIN@6 | File::Path::
317 | 1 | 1 | 2.90ms | 2.90ms | dirname | File::Temp::Dir::
1 | 1 | 1 | 2.89ms | 3.27ms | BEGIN@13 | Graph::
1 | 1 | 1 | 2.87ms | 16.6ms | BEGIN@152 | Bio::Tools::GFF::
4458 | 32 | 14 | 2.85ms | 2.85ms | name (xsub) | Class::MOP::Package::
195 | 2 | 2 | 2.84ms | 124ms | _generate_reader_method_inline | Class::MOP::Method::Accessor::
633 | 1 | 1 | 2.83ms | 3.37ms | attach_to_class | Class::MOP::Method::
2561 | 26 | 16 | 2.81ms | 2.81ms | can (xsub) | UNIVERSAL::
1 | 1 | 1 | 2.79ms | 2.98ms | BEGIN@38 | Graph::
1 | 1 | 1 | 2.75ms | 11.5ms | BEGIN@25 | Moose::
874 | 4 | 3 | 2.72ms | 3.65ms | default | Class::MOP::Mixin::AttributeCore::
534 | 3 | 2 | 2.69ms | 3.32ms | _is_compatible_with | Class::MOP::Object::
189 | 2 | 2 | 2.68ms | 69.5ms | interpolate_class_and_new | Moose::Meta::Attribute::
271 | 1 | 1 | 2.66ms | 13.3ms | _inline_init_attr_from_constructor | Class::MOP::Class::
1 | 1 | 1 | 2.65ms | 2.69ms | BEGIN@2 | Bio::Roary::CommandLine::RoaryPostAnalysis::
322 | 2 | 1 | 2.65ms | 3.23ms | invalidate_meta_instances | Class::MOP::Class::
4315 | 17 | 4 | 2.63ms | 2.63ms | associated_class (xsub) | Class::MOP::Attribute::
320 | 1 | 1 | 2.61ms | 3.53ms | attach_to_class | Class::MOP::Attribute::
1 | 1 | 1 | 2.61ms | 2.72ms | BEGIN@332 | Bio::SeqIO::
266 | 2 | 2 | 2.59ms | 26.6ms | _inline_instance_get | Class::MOP::Attribute::
405 | 2 | 2 | 2.59ms | 3.94ms | _inline_default_value | Class::MOP::Class::
32 | 2 | 1 | 2.52ms | 3.18ms | CORE:sort (opcode) | Moose::Meta::Class::
710 | 5 | 3 | 2.46ms | 29.4ms | _inline_set_value | Class::MOP::Attribute::
2156 | 14 | 11 | 2.44ms | 2.44ms | weaken (xsub) | Scalar::Util::
1 | 1 | 1 | 2.43ms | 5.81ms | BEGIN@12 | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 2.40ms | 3.91ms | BEGIN@5 | Bio::Root::IO::
1 | 1 | 1 | 2.40ms | 3.17ms | BEGIN@13 | File::Copy::
46 | 2 | 2 | 2.39ms | 169ms | _generate_constructor_method_inline | Class::MOP::Method::Constructor::
1295 | 5 | 1 | 2.37ms | 32.4ms | _clustered_genes | Bio::Roary::InflateClusters::
1 | 1 | 1 | 2.36ms | 11.8ms | BEGIN@124 | Bio::PrimarySeqI::
1 | 1 | 1 | 2.36ms | 484ms | BEGIN@11 | Bio::Roary::CommandLine::RoaryPostAnalysis::
224 | 2 | 1 | 2.34ms | 2.72ms | _new | Graph::AdjacencyMap::Light::
1 | 1 | 1 | 2.34ms | 2.57ms | BEGIN@11 | Moose::
108 | 2 | 1 | 2.32ms | 6.48ms | _expand_groups (recurses: max depth 2, inclusive time 5.59ms) | Sub::Exporter::
272 | 12 | 7 | 2.28ms | 5.64ms | find_type_constraint | Moose::Util::TypeConstraints::
1 | 1 | 1 | 2.28ms | 31.9ms | BEGIN@151 | Bio::Tools::GFF::
351 | 15 | 6 | 2.27ms | 7.14ms | meta | Class::MOP::Object::
189 | 1 | 1 | 2.26ms | 2.35ms | _new | Moose::Meta::Instance::
253 | 5 | 5 | 2.25ms | 51.5ms | new_object | Class::MOP::Class::
206 | 4 | 1 | 2.25ms | 3.04ms | _instance_is_inlinable | Moose::Meta::Method::Accessor::
1 | 1 | 1 | 2.24ms | 178ms | BEGIN@16 | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 2.24ms | 167ms | BEGIN@20 | Bio::Roary::PostAnalysis::
458 | 3 | 2 | 2.22ms | 4.27ms | has_package_symbol | Class::MOP::Package::
420 | 3 | 3 | 2.21ms | 2.55ms | has_attribute | Class::MOP::Mixin::HasAttributes::
58 | 3 | 2 | 2.20ms | 13.2ms | default_installer | Sub::Exporter::
1 | 1 | 1 | 2.20ms | 2.81ms | BEGIN@11 | Data::OptList::
320 | 1 | 1 | 2.17ms | 327ms | try {...} | Class::MOP::Class::
104 | 2 | 1 | 2.16ms | 30.1ms | _check_metaclass_compatibility (recurses: max depth 1, inclusive time 331µs) | Class::MOP::Class::
47 | 47 | 37 | 2.13ms | 2.65ms | import | vars::
194 | 1 | 1 | 2.12ms | 11.0ms | find_or_parse_type_constraint (recurses: max depth 1, inclusive time 63µs) | Moose::Util::TypeConstraints::
67 | 1 | 1 | 2.11ms | 13.9ms | __attr | Graph::AdjacencyMap::Light::
65 | 1 | 1 | 2.10ms | 15.8ms | _can_fix_metaclass_incompatibility | Class::MOP::Class::
84 | 1 | 1 | 2.07ms | 32.8ms | _construct_class_instance (recurses: max depth 1, inclusive time 421µs) | Class::MOP::Class::
1 | 1 | 1 | 2.07ms | 2.88ms | BEGIN@6 | Moose::Meta::Attribute::
1 | 1 | 1 | 2.06ms | 2.71ms | BEGIN@9 | Moose::
187 | 1 | 1 | 2.06ms | 30.7ms | _inline_init_attr_from_constructor | Moose::Meta::Class::
1 | 1 | 1 | 2.06ms | 49.9ms | BEGIN@22 | Bio::Roary::PostAnalysis::
408 | 2 | 1 | 2.05ms | 4.71ms | _can_be_made_compatible_with | Class::MOP::Object::
1415 | 1 | 1 | 2.05ms | 2.05ms | _has_inlined_type_constraint | Moose::Meta::TypeConstraint::
105 | 2 | 2 | 2.04ms | 9.51ms | find_next_method_by_name | Class::MOP::Class::
988 | 11 | 5 | 2.03ms | 37.4ms | get_meta_instance | Class::MOP::Class::
187 | 1 | 1 | 2.02ms | 16.1ms | _inline_init_attr_from_default | Moose::Meta::Class::
207 | 4 | 1 | 2.01ms | 90.9ms | _compile_code | Moose::Meta::Method::Accessor::
190 | 1 | 1 | 2.01ms | 17.4ms | _process_isa_option | Moose::Meta::Attribute::
1 | 1 | 1 | 2.00ms | 9.26ms | BEGIN@9 | Class::MOP::Class::
1 | 1 | 1 | 1.97ms | 2.55ms | BEGIN@106 | Bio::LocatableSeq::
134 | 1 | 1 | 1.92ms | 3.24ms | edges05 | Graph::
2564 | 8 | 2 | 1.91ms | 1.98ms | namespace (xsub) | Package::Stash::XS::
1 | 1 | 1 | 1.91ms | 2.50ms | BEGIN@147 | Bio::SeqFeature::Generic::
191 | 2 | 1 | 1.90ms | 41.8ms | _inline_get_value | Moose::Meta::Attribute::
148 | 2 | 1 | 1.89ms | 1.89ms | _get_options | Graph::
318 | 1 | 1 | 1.89ms | 34.4ms | _inline_tc_code | Moose::Meta::Attribute::
1 | 1 | 1 | 1.87ms | 791ms | BEGIN@13 | Bio::Roary::CommandLine::RoaryPostAnalysis::
172 | 1 | 1 | 1.87ms | 64.8ms | _process_new_attribute | Moose::Meta::Class::
1 | 1 | 1 | 1.85ms | 48.7ms | BEGIN@12 | Moose::
282 | 2 | 1 | 1.84ms | 7.51ms | _inline_init_attr_from_default | Class::MOP::Class::
187 | 1 | 1 | 1.84ms | 54.1ms | _inline_slot_initializer | Moose::Meta::Class::
1 | 1 | 1 | 1.83ms | 3.95ms | BEGIN@145 | Bio::SeqFeature::Generic::
22 | 1 | 1 | 1.77ms | 14.0ms | __ANON__[Moose/Exporter.pm:140] | Moose::Exporter::
46 | 1 | 1 | 1.76ms | 188ms | _inline_constructor | Class::MOP::Class::
1 | 1 | 1 | 1.76ms | 2.03ms | BEGIN@190 | Bio::Tools::CodonTable::
108 | 1 | 1 | 1.75ms | 2.85ms | _single_metaclass_is_compatible | Class::MOP::Class::
191 | 2 | 1 | 1.74ms | 284ms | install_accessors | Moose::Meta::Attribute::
1 | 1 | 1 | 1.74ms | 8.45ms | BEGIN@18 | Bio::Roary::Output::GroupsMultifastaNucleotide::
1 | 1 | 1 | 1.74ms | 3.05ms | BEGIN@35 | Moose::
58 | 37 | 33 | 1.73ms | 41.3ms | __ANON__[Sub/Exporter.pm:337] | Sub::Exporter::
1 | 1 | 1 | 1.72ms | 4.96ms | BEGIN@16 | Class::MOP::
187 | 1 | 1 | 1.71ms | 2.47ms | _inline_check_required_attr | Moose::Meta::Class::
46 | 1 | 1 | 1.71ms | 87.2ms | _inline_slot_initializers | Class::MOP::Class::
70 | 1 | 1 | 1.71ms | 39.8ms | _immutable_metaclass (recurses: max depth 1, inclusive time 227µs) | Class::MOP::Class::
2475 | 8 | 2 | 1.71ms | 1.71ms | _attribute_map (xsub) | Class::MOP::Mixin::HasAttributes::
513 | 5 | 3 | 1.70ms | 6.89ms | get_meta_instance | Class::MOP::Class::Immutable::Class::MOP::Class::
70 | 22 | 20 | 1.70ms | 301ms | make_immutable (recurses: max depth 1, inclusive time 464µs) | Class::MOP::Class::
46 | 2 | 2 | 1.69ms | 9.81ms | _eval_environment | Class::MOP::Class::
185 | 2 | 2 | 1.68ms | 1.68ms | _caller_info | Moose::Util::
1 | 1 | 1 | 1.67ms | 1.86ms | BEGIN@8 | Class::MOP::Class::
17 | 1 | 1 | 1.66ms | 1.70ms | _remove_keywords | Moose::Exporter::
1 | 1 | 1 | 1.65ms | 36.8ms | BEGIN@21 | Bio::Roary::PostAnalysis::
169 | 4 | 2 | 1.63ms | 18.5ms | superclasses (recurses: max depth 1, inclusive time 600µs) | Class::MOP::Class::
700 | 3 | 3 | 1.63ms | 1.63ms | get_linear_isa (xsub) | mro::
382 | 2 | 1 | 1.62ms | 2.32ms | _inline_weaken_value | Moose::Meta::Attribute::
172 | 1 | 1 | 1.62ms | 66.6ms | _process_attribute | Moose::Meta::Class::
1 | 1 | 1 | 1.61ms | 3.29ms | BEGIN@75 | Bio::DB::InMemoryCache::
1 | 1 | 1 | 1.61ms | 1.96ms | BEGIN@28 | Graph::
323 | 1 | 1 | 1.60ms | 1.60ms | __ANON__[Sub/Install.pm:187] | Sub::Install::
62 | 2 | 1 | 1.60ms | 6.90ms | can_be_inlined | Class::MOP::Method::Inlined::
2626 | 2 | 1 | 1.59ms | 1.59ms | CORE:readline (opcode) | Bio::Roary::ClustersRole::
131 | 1 | 1 | 1.58ms | 2.26ms | _new | Class::MOP::Attribute::
367 | 4 | 2 | 1.57ms | 8.02ms | has_method | Class::MOP::Mixin::HasMethods::
222 | 5 | 4 | 1.57ms | 5.69ms | module_notional_filename | Module::Runtime::
48 | 9 | 6 | 1.54ms | 17.4ms | new | Moose::Meta::TypeConstraint::
160 | 1 | 1 | 1.52ms | 2.73ms | __ANON__[Moose/Exporter.pm:389] | Moose::Exporter::
134 | 2 | 1 | 1.51ms | 5.98ms | edges | Graph::
1 | 1 | 1 | 1.50ms | 4.19ms | BEGIN@10 | Graph::TransitiveClosure::
1 | 1 | 1 | 1.50ms | 53.4ms | BEGIN@17 | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 1.49ms | 23.6ms | BEGIN@144 | Try::Tiny::ScopeGuard::
320 | 1 | 1 | 1.49ms | 5.02ms | _attach_attribute | Class::MOP::Class::
443 | 3 | 2 | 1.49ms | 6.09ms | get_all_attributes | Class::MOP::Class::Immutable::Class::MOP::Class::
64 | 1 | 1 | 1.48ms | 2.14ms | _inline_generate_default | Moose::Meta::Attribute::
295 | 8 | 6 | 1.48ms | 1.66ms | class_of | Class::MOP::
97 | 5 | 4 | 1.47ms | 15.3ms | use_package_optimistically (recurses: max depth 1, inclusive time 87µs) | Module::Runtime::
1081 | 3 | 2 | 1.46ms | 1.46ms | type_constraint | Moose::Meta::Mixin::AttributeCore::
15 | 2 | 1 | 1.45ms | 1.58ms | as_heavy | Exporter::
64 | 1 | 1 | 1.44ms | 11.4ms | _inline_init_from_default | Moose::Meta::Attribute::
464 | 2 | 1 | 1.43ms | 1.43ms | associate_method | Class::MOP::Attribute::
1 | 1 | 1 | 1.42ms | 1.68ms | BEGIN@7 | Class::MOP::Mixin::HasOverloads::
194 | 3 | 3 | 1.41ms | 15.8ms | find_or_create_isa_type_constraint (recurses: max depth 1, inclusive time 81µs) | Moose::Util::TypeConstraints::
1 | 1 | 1 | 1.40ms | 1.53ms | BEGIN@7 | Class::MOP::Class::
229 | 206 | 200 | 1.40ms | 4.00ms | import | strict::
1 | 1 | 1 | 1.38ms | 2.13ms | BEGIN@9 | Class::MOP::
1 | 1 | 1 | 1.38ms | 28.2ms | BEGIN@9 | Class::Load::
254 | 2 | 1 | 1.35ms | 1.95ms | has_type_constraint | Moose::Meta::TypeConstraint::Registry::
222 | 1 | 1 | 1.35ms | 2.77ms | is_module_name | Module::Runtime::
460 | 3 | 2 | 1.34ms | 1.40s | contig_to_ids | Bio::Roary::ContigsToGeneIDsFromGFF::
1 | 1 | 1 | 1.33ms | 8.39ms | BEGIN@10 | Moose::Exporter::
458 | 1 | 1 | 1.32ms | 1.55ms | has_symbol (xsub) | Package::Stash::XS::
1 | 1 | 1 | 1.32ms | 3.17ms | BEGIN@29 | Graph::
369 | 2 | 1 | 1.32ms | 1.83ms | _inline_check_coercion | Moose::Meta::Attribute::
1 | 1 | 1 | 1.31ms | 26.6ms | BEGIN@10 | Module::Implementation::
44 | 2 | 1 | 1.31ms | 3.26ms | wrap | Class::MOP::Method::Wrapped::
1 | 1 | 1 | 1.30ms | 1.41s | BEGIN@17 | Bio::Roary::Main::RoaryPostAnalysis::
1 | 1 | 1 | 1.30ms | 1.56ms | BEGIN@8 | Devel::GlobalDestruction::
1 | 1 | 1 | 1.29ms | 4.31ms | BEGIN@33 | Moose::
1 | 1 | 1 | 1.29ms | 35.6ms | BEGIN@23 | Bio::Roary::Output::GroupsMultifastasNucleotide::
470 | 3 | 3 | 1.27ms | 1.27ms | is_default_a_coderef | Class::MOP::Mixin::AttributeCore::
1 | 1 | 1 | 1.24ms | 1.38ms | BEGIN@7 | File::Path::
97 | 5 | 2 | 1.23ms | 23.1ms | superclasses (recurses: max depth 2, inclusive time 2.48ms) | Moose::Meta::Class::
191 | 1 | 1 | 1.23ms | 14.5ms | _inline_check_lazy | Moose::Meta::Attribute::
1 | 1 | 1 | 1.23ms | 8.03ms | BEGIN@17 | Class::MOP::
207 | 1 | 1 | 1.23ms | 83.7ms | try {...} | Moose::Meta::Method::Accessor::
273 | 6 | 1 | 1.22ms | 1.55ms | get_type_constraint | Moose::Meta::TypeConstraint::Registry::
1 | 1 | 1 | 1.22ms | 2.16ms | BEGIN@7 | Exception::Class::Base::
70 | 2 | 2 | 1.22ms | 1.58ms | _immutable_options | Class::MOP::Class::
1 | 1 | 1 | 1.21ms | 4.09ms | BEGIN@9 | Exception::Class::
207 | 1 | 1 | 1.21ms | 18.4ms | _eval_environment | Moose::Meta::Method::Accessor::
2 | 1 | 1 | 1.21ms | 12.1ms | unique_vertices | Graph::
317 | 2 | 1 | 1.21ms | 1.49ms | metaclass_is_weak | Class::MOP::
166 | 1 | 1 | 1.20ms | 1.52ms | link_as_parent_of | Heap071::Fibonacci::
1 | 1 | 1 | 1.20ms | 3.46ms | BEGIN@7 | Moose::Deprecated::
38 | 1 | 1 | 1.20ms | 1.76ms | configure | Graph::Traversal::
75 | 1 | 1 | 1.20ms | 4.54ms | wrap_method_body | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 1.20ms | 1.81ms | BEGIN@330 | Bio::SeqIO::
656 | 1 | 1 | 1.19ms | 1.19ms | CORE:match (opcode) | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 1.18ms | 6.23ms | BEGIN@7 | Class::MOP::Method::Generated::
421 | 3 | 1 | 1.17ms | 1.17ms | _inline_throw_exception | Moose::Meta::Attribute::
1 | 1 | 1 | 1.17ms | 3.45ms | BEGIN@25 | Moose::Util::TypeConstraints::
22 | 1 | 1 | 1.17ms | 1.23ms | _new | Moose::Meta::TypeConstraint::Class::
58 | 1 | 1 | 1.16ms | 1.62ms | _collect_collections | Sub::Exporter::
814 | 2 | 1 | 1.14ms | 1.14ms | get_code_info (xsub) | Class::MOP::
677 | 2 | 1 | 1.14ms | 1.14ms | get_pkg_gen (xsub) | mro::
323 | 1 | 1 | 1.14ms | 1.33ms | _CODELIKE | Sub::Install::
70 | 1 | 1 | 1.13ms | 3.43ms | find_attribute_by_name | Class::MOP::Class::
1 | 1 | 1 | 1.13ms | 6.35ms | BEGIN@46 | Safe::
266 | 1 | 1 | 1.13ms | 2.05ms | inline_get_slot_value | Class::MOP::Instance::
823 | 1 | 1 | 1.12ms | 1.12ms | CORE:match (opcode) | Eval::Closure::
184 | 1 | 1 | 1.12ms | 6.26ms | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:60] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 1.12ms | 1.52ms | BEGIN@621 | Moose::Util::TypeConstraints::
7 | 6 | 6 | 1.10ms | 40.8ms | apply | Class::MOP::MiniTrait::
1 | 1 | 1 | 1.10ms | 14.6ms | BEGIN@8 | Class::Load::
158 | 1 | 1 | 1.10ms | 1.40ms | _code_is_mine | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 1.09ms | 2.58ms | BEGIN@7 | Class::Load::
1 | 1 | 1 | 1.09ms | 8.85ms | BEGIN@21 | Bio::Roary::GroupStatistics::
795 | 1 | 1 | 1.09ms | 1.09ms | inlined | Moose::Meta::TypeConstraint::
6 | 1 | 1 | 1.08ms | 1.08ms | dl_load_file (xsub) | DynaLoader::
44 | 6 | 5 | 1.08ms | 23.6ms | _add_meta_method | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 1.08ms | 1.43ms | BEGIN@15 | Graph::AdjacencyMap::Light::
1 | 1 | 1 | 1.07ms | 12.0ms | BEGIN@11 | Bio::Roary::ClustersRole::
16 | 1 | 1 | 1.07ms | 115ms | new | Moose::Meta::Method::Constructor::
70 | 1 | 1 | 1.07ms | 257ms | _initialize_immutable | Class::MOP::Class::
1 | 1 | 1 | 1.07ms | 1.30ms | BEGIN@22 | DynaLoader::
17 | 17 | 17 | 1.07ms | 78.0ms | import | Moose::
1 | 1 | 1 | 1.06ms | 1.59ms | BEGIN@331 | Bio::SeqIO::
771 | 5 | 3 | 1.06ms | 1.06ms | has_default | Class::MOP::Mixin::AttributeCore::
280 | 4 | 1 | 1.05ms | 3.19ms | _method_lookup_order | Class::MOP::Class::
44 | 2 | 2 | 1.04ms | 14.6ms | wrap | Class::MOP::Method::Meta::
1 | 1 | 1 | 1.04ms | 2.24ms | BEGIN@10 | Class::MOP::Class::
1 | 1 | 1 | 1.03ms | 7.28ms | BEGIN@105 | Bio::LocatableSeq::
318 | 1 | 1 | 1.03ms | 1.56ms | _writer_value_needs_copy | Moose::Meta::Attribute::
3 | 1 | 1 | 1.03ms | 1.12ms | _rebuild_cache | Exporter::Heavy::
197 | 1 | 1 | 1.03ms | 1.03ms | _percent_overlap | Bio::Roary::ContigsToGeneIDsFromGFF::
327 | 2 | 1 | 1.02ms | 1.02ms | CORE:regcomp (opcode) | File::Basename::
17 | 1 | 1 | 1.01ms | 51.9ms | init_meta | Moose::
70 | 1 | 1 | 1.01ms | 256ms | _install_inlined_code | Class::MOP::Class::
169 | 1 | 1 | 1.00ms | 4.29ms | get_or_add_package_symbol | Class::MOP::Package::
1 | 1 | 1 | 1.00ms | 2.55ms | BEGIN@36 | Moose::
576 | 4 | 2 | 1.00ms | 1.00ms | type_constraints | Moose::Meta::TypeConstraint::Registry::
131 | 124 | 23 | 1.00ms | 1.00ms | _definition_context | Class::MOP::
1 | 1 | 1 | 1.00ms | 1.47ms | BEGIN@17 | Moose::Meta::Class::
1 | 1 | 1 | 1.00ms | 5.64ms | BEGIN@11 | Bio::Roary::Exceptions::
66 | 1 | 1 | 992µs | 992µs | _new | Class::MOP::Class::
16 | 1 | 1 | 990µs | 3.79ms | _inline_triggers | Moose::Meta::Class::
13 | 1 | 1 | 988µs | 1.28ms | FindOption | Getopt::Long::
169 | 1 | 1 | 976µs | 1.54ms | get_or_add_symbol (xsub) | Package::Stash::XS::
1 | 1 | 1 | 976µs | 36.4ms | BEGIN@19 | Bio::Roary::PostAnalysis::
1428 | 5 | 4 | 974µs | 974µs | reftype (xsub) | Scalar::Util::
640 | 3 | 1 | 974µs | 1.06ms | has_type_constraint | Moose::Meta::Mixin::AttributeCore::
50 | 1 | 1 | 974µs | 5.31ms | _expand_group (recurses: max depth 1, inclusive time 3.71ms) | Sub::Exporter::
1 | 1 | 1 | 971µs | 30.5ms | BEGIN@14 | Bio::Roary::PostAnalysis::
90 | 2 | 1 | 968µs | 968µs | group_statistics_obj | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 965µs | 987µs | BEGIN@5 | Graph::AdjacencyMatrix::
1 | 1 | 1 | 962µs | 1.25ms | BEGIN@25 | Bio::Roary::AnnotateGroups::
685 | 5 | 2 | 961µs | 1.12ms | has_trigger | Moose::Meta::Mixin::AttributeCore::
16 | 1 | 1 | 961µs | 7.29ms | new | Moose::Meta::Method::Destructor::
634 | 4 | 1 | 956µs | 956µs | CORE:match (opcode) | utf8::
44 | 2 | 1 | 949µs | 13.7ms | __ANON__[Class/MOP/Class.pm:1082] | Class::MOP::Class::
1 | 1 | 1 | 949µs | 1.16ms | BEGIN@86 | Graph::
189 | 1 | 1 | 938µs | 938µs | interpolate_class | Moose::Meta::Attribute::
808 | 13 | 3 | 938µs | 938µs | associated_attribute | Class::MOP::Method::Accessor::
1 | 1 | 1 | 925µs | 4.46ms | BEGIN@30 | Moose::
194 | 1 | 1 | 923µs | 1.14ms | normalize_type_constraint_name | Moose::Util::TypeConstraints::
87 | 2 | 2 | 923µs | 1.76ms | _inline_instance_has | Class::MOP::Attribute::
687 | 2 | 1 | 920µs | 1.04ms | should_coerce | Moose::Meta::Mixin::AttributeCore::
190 | 1 | 1 | 918µs | 918µs | _process_is_option | Moose::Meta::Attribute::
70 | 1 | 1 | 914µs | 40.7ms | _rebless_as_immutable (recurses: max depth 1, inclusive time 284µs) | Class::MOP::Class::
71 | 2 | 2 | 914µs | 58.5ms | _generate_accessor_method_inline | Class::MOP::Method::Accessor::
1 | 1 | 1 | 905µs | 2.67ms | BEGIN@34 | Moose::
140 | 1 | 1 | 902µs | 111ms | _generate_reader_method | Moose::Meta::Method::Accessor::
160 | 1 | 1 | 897µs | 897µs | _late_curry_wrapper | Moose::Exporter::
36 | 2 | 1 | 897µs | 1.39ms | _base_metaclasses | Moose::Meta::Class::
1 | 1 | 1 | 896µs | 1.12ms | BEGIN@585 | Bio::SeqUtils::
1 | 1 | 1 | 895µs | 2.81ms | BEGIN@19 | Devel::OverloadInfo::
54 | 1 | 1 | 895µs | 17.4ms | _fix_metaclass_incompatibility (recurses: max depth 1, inclusive time 198µs) | Class::MOP::Class::
2168 | 5 | 1 | 870µs | 870µs | CORE:subst (opcode) | Exporter::Heavy::
126 | 103 | 101 | 867µs | 867µs | import | warnings::
191 | 1 | 1 | 864µs | 1.29ms | _auto_deref | Moose::Meta::Attribute::
125 | 1 | 1 | 858µs | 8.36ms | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:77] | Moose::Util::TypeConstraints::Builtins::
163 | 3 | 2 | 848µs | 968µs | get_attribute | Class::MOP::Mixin::HasAttributes::
1 | 1 | 1 | 845µs | 28.4ms | BEGIN@21 | Bio::Roary::OrderGenes::
31 | 31 | 10 | 840µs | 1.04ms | import | constant::
1 | 1 | 1 | 837µs | 1.08ms | BEGIN@17 | File::Temp::
398 | 2 | 1 | 836µs | 836µs | has_accessor | Class::MOP::Mixin::AttributeCore::
92 | 3 | 2 | 836µs | 836µs | new (xsub) | Package::Stash::XS::
32 | 2 | 2 | 835µs | 4.23ms | find_all_methods_by_name | Class::MOP::Class::
46 | 1 | 1 | 834µs | 100ms | _inline_new_object | Class::MOP::Class::
2 | 1 | 1 | 830µs | 830µs | CORE:sort (opcode) | Bio::Roary::AnalyseGroups::
240 | 2 | 1 | 830µs | 830µs | CORE:match (opcode) | Module::Runtime::
191 | 1 | 1 | 827µs | 2.12ms | _inline_return_auto_deref | Moose::Meta::Attribute::
189 | 1 | 1 | 825µs | 974µs | _check_associated_methods | Moose::Meta::Attribute::
1 | 1 | 1 | 825µs | 4.91ms | BEGIN@99 | Bio::SeqFeatureI::
414 | 2 | 1 | 825µs | 825µs | _group_name | Sub::Exporter::
1 | 1 | 1 | 822µs | 1.76ms | BEGIN@10 | Package::DeprecationManager::
18 | 2 | 1 | 821µs | 821µs | CORE:close (opcode) | Bio::Roary::AnalyseGroups::
1 | 1 | 1 | 820µs | 1.55ms | BEGIN@37 | Moose::
36 | 1 | 1 | 809µs | 966µs | all (xsub) | List::Util::
73 | 1 | 1 | 806µs | 15.8ms | _actually_compile_type_constraint | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 806µs | 906µs | BEGIN@4 | Bio::Root::IO::
1 | 1 | 1 | 795µs | 1.78ms | BEGIN@28 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 794µs | 501ms | _pre_filter_fasta_files | Bio::Roary::SplitGroups::
16 | 1 | 1 | 790µs | 13.7ms | _inline_destructor | Class::MOP::Class::
408 | 3 | 3 | 790µs | 790µs | _default_message | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 787µs | 1.24ms | BEGIN@13 | Bio::Roary::CommandLine::Common::
191 | 1 | 1 | 778µs | 1.92ms | __ANON__[Moose/Exporter.pm:252] | Moose::Exporter::
443 | 1 | 1 | 777µs | 777µs | _inline_environment | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 775µs | 104ms | BEGIN@26 | Moose::
84 | 76 | 5 | 773µs | 11.7ms | meta | Class::MOP::Mixin::
38 | 2 | 2 | 771µs | 39.3ms | new | Graph::Traversal::
378 | 2 | 2 | 763µs | 834µs | is_lazy | Moose::Meta::Mixin::AttributeCore::
1 | 1 | 1 | 760µs | 1.97ms | BEGIN@31 | Moose::Util::TypeConstraints::
398 | 2 | 1 | 750µs | 750µs | has_predicate | Class::MOP::Mixin::AttributeCore::
1 | 1 | 1 | 745µs | 2.66ms | BEGIN@5 | Graph::TransitiveClosure::Matrix::
224 | 2 | 1 | 743µs | 743µs | _opt_get | Graph::
398 | 2 | 1 | 741µs | 741µs | has_writer | Class::MOP::Mixin::AttributeCore::
85 | 1 | 1 | 740µs | 6.75ms | _new | Class::MOP::Method::
398 | 2 | 1 | 738µs | 738µs | has_reader | Class::MOP::Mixin::AttributeCore::
83 | 1 | 1 | 733µs | 1.14ms | __ANON__[Moose/Meta/TypeConstraint/Class.pm:25] | Moose::Meta::TypeConstraint::Class::
1 | 1 | 1 | 733µs | 3.28ms | BEGIN@11 | Moose::Meta::Role::
1 | 1 | 1 | 732µs | 1.07ms | BEGIN@13 | Moose::Meta::Attribute::
1 | 1 | 1 | 731µs | 61.5ms | BEGIN@13 | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 726µs | 4.78ms | BEGIN@9 | Class::MOP::Mixin::HasOverloads::
398 | 2 | 1 | 721µs | 721µs | has_clearer | Class::MOP::Mixin::AttributeCore::
246 | 2 | 1 | 717µs | 2.07ms | _method_map | Class::MOP::Class::Immutable::Class::MOP::Class::
249 | 3 | 3 | 716µs | 716µs | _compiled_type_constraint | Moose::Meta::TypeConstraint::
48 | 8 | 2 | 712µs | 1.05ms | add_type_constraint | Moose::Meta::TypeConstraint::Registry::
222 | 1 | 1 | 710µs | 710µs | CORE:subst (opcode) | Module::Runtime::
1 | 1 | 1 | 709µs | 3.01ms | BEGIN@7 | Class::MOP::Mixin::HasMethods::
8 | 1 | 1 | 707µs | 894µs | new | Bio::Roary::ContigsToGeneIDsFromGFF::
30 | 1 | 1 | 707µs | 57.1ms | new | Class::MOP::Method::Constructor::
1 | 1 | 1 | 697µs | 2.10ms | BEGIN@30 | Moose::Util::TypeConstraints::
44 | 1 | 1 | 697µs | 697µs | _new | Class::MOP::Method::Wrapped::
1 | 1 | 1 | 694µs | 5.10ms | BEGIN@26 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 688µs | 777µs | BEGIN@10 | Devel::StackTrace::
36 | 1 | 1 | 686µs | 1.80s | MST_Prim | Graph::
1 | 1 | 1 | 677µs | 49.2ms | BEGIN@15 | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 674µs | 2.55ms | BEGIN@10 | Moose::Meta::TypeConstraint::Parameterized::
1 | 1 | 1 | 674µs | 1.36ms | BEGIN@4 | base::
866 | 8 | 6 | 672µs | 672µs | body (xsub) | Class::MOP::Method::
408 | 3 | 3 | 664µs | 664µs | has_message | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 664µs | 63.4ms | BEGIN@18 | Bio::Roary::PostAnalysis::
24 | 11 | 1 | 664µs | 664µs | CORE:regcomp (opcode) | Moose::Util::TypeConstraints::
8 | 1 | 1 | 662µs | 740µs | new | Bio::Roary::GeneNamesFromGFF::
6 | 5 | 5 | 659µs | 2.99ms | bootstrap | DynaLoader::
172 | 2 | 2 | 646µs | 789µs | countedged | Graph::
16 | 1 | 1 | 645µs | 6.31ms | _initialize_body | Moose::Meta::Method::Destructor::
29 | 1 | 1 | 645µs | 5.78ms | _new | Moose::Meta::Method::
333 | 1 | 1 | 643µs | 643µs | _set_insertion_order | Class::MOP::Mixin::AttributeCore::
32 | 2 | 2 | 637µs | 793µs | clone | Class::MOP::Method::
1 | 1 | 1 | 637µs | 1.62ms | BEGIN@29 | Moose::Util::TypeConstraints::
222 | 1 | 1 | 636µs | 3.41ms | check_module_name | Module::Runtime::
382 | 1 | 1 | 630µs | 679µs | is_weak_ref | Moose::Meta::Mixin::AttributeCore::
1 | 1 | 1 | 617µs | 1.03ms | BEGIN@15 | Moose::Meta::Class::
366 | 3 | 3 | 613µs | 613µs | has_coercion | Moose::Meta::TypeConstraint::
33 | 1 | 1 | 605µs | 52.7ms | _inline_accessors | Class::MOP::Class::
37 | 37 | 26 | 601µs | 601µs | VERSION (xsub) | UNIVERSAL::
22 | 1 | 1 | 600µs | 13.9ms | new | Moose::Meta::TypeConstraint::Class::
1 | 1 | 1 | 599µs | 994µs | BEGIN@14 | Moose::Meta::Class::
222 | 1 | 1 | 598µs | 598µs | _is_string | Module::Runtime::
1 | 1 | 1 | 597µs | 856µs | BEGIN@14 | Moose::Meta::Attribute::
1 | 1 | 1 | 593µs | 1.16ms | BEGIN@16 | File::Temp::
1 | 1 | 1 | 591µs | 644µs | BEGIN@85 | overload::
195 | 1 | 1 | 589µs | 589µs | _inline_throw_exception | Class::MOP::Method::Accessor::
386 | 4 | 3 | 583µs | 583µs | has_builder | Class::MOP::Mixin::AttributeCore::
5 | 1 | 1 | 583µs | 646µs | register_categories | warnings::
322 | 1 | 1 | 582µs | 582µs | invalidate_meta_instance | Class::MOP::Class::
1 | 1 | 1 | 578µs | 1.70ms | BEGIN@6 | Moose::Meta::TypeConstraint::
766 | 6 | 2 | 568µs | 568µs | name (xsub) | Package::Stash::XS::
1 | 1 | 1 | 568µs | 568µs | BEGIN@970 | Text::CSV_PP::
793 | 10 | 3 | 566µs | 566µs | instance_metaclass (xsub) | Class::MOP::Class::
490 | 8 | 4 | 565µs | 565µs | __ANON__[Moose/Meta/TypeConstraint.pm:10] | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 565µs | 590µs | BEGIN@31 | Graph::
22 | 2 | 1 | 564µs | 15.2ms | create_class_type_constraint | Moose::Util::TypeConstraints::
1 | 1 | 1 | 556µs | 998µs | BEGIN@18 | Devel::OverloadInfo::
394 | 1 | 1 | 553µs | 553µs | accessor_type | Class::MOP::Method::Accessor::
1 | 1 | 1 | 551µs | 1.05ms | BEGIN@93 | Bio::Annotation::Collection::
1 | 1 | 1 | 543µs | 17.2ms | BEGIN@15 | Bio::Roary::PostAnalysis::
4 | 2 | 1 | 540µs | 540µs | CORE:open (opcode) | Bio::Roary::Output::EmblGroups::
30 | 1 | 1 | 538µs | 538µs | _new | Class::MOP::Method::Constructor::
1 | 1 | 1 | 537µs | 760µs | BEGIN@6 | File::Find::Rule::
1 | 1 | 1 | 534µs | 908µs | BEGIN@16 | Moose::Meta::Class::
16 | 1 | 1 | 533µs | 812µs | any (xsub) | List::Util::
94 | 4 | 1 | 533µs | 897µs | _real_ref_name | Class::MOP::Class::
1 | 1 | 1 | 530µs | 4.59ms | BEGIN@13 | Moose::Meta::Class::
1 | 1 | 1 | 529µs | 529µs | load_imports | POSIX::
1 | 1 | 1 | 527µs | 2.28ms | BEGIN@34 | Moose::Util::TypeConstraints::
719 | 2 | 2 | 525µs | 525µs | package_name (xsub) | Class::MOP::Method::
408 | 3 | 1 | 522µs | 522µs | CORE:match (opcode) | vars::
197 | 1 | 1 | 517µs | 517µs | _min_nucleotide_overlap_percentage | Bio::Roary::ContigsToGeneIDsFromGFF::
65 | 1 | 1 | 516µs | 2.05ms | _class_metaclass_can_be_made_compatible | Class::MOP::Class::
1 | 1 | 1 | 516µs | 122ms | BEGIN@21 | Bio::Roary::AnnotateGroups::
80 | 1 | 1 | 516µs | 200ms | _files_to_groups | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 514µs | 614µs | BEGIN@15 | Class::MOP::
64 | 1 | 1 | 514µs | 1.86ms | _inline_init_slot | Moose::Meta::Attribute::
4 | 2 | 1 | 509µs | 509µs | CORE:close (opcode) | Bio::Roary::Output::EmblGroups::
67 | 1 | 1 | 502µs | 5.56ms | add_edges | Graph::
1 | 1 | 1 | 499µs | 1.33ms | BEGIN@1 | Try::Tiny::
54 | 1 | 1 | 498µs | 596µs | _generate_reader_method | Class::MOP::Method::Accessor::
72 | 72 | 36 | 497µs | 1.09ms | unimport | strict::
1 | 1 | 1 | 487µs | 4.77ms | BEGIN@32 | Graph::
119 | 3 | 2 | 479µs | 479µs | _base_metaclasses | Class::MOP::Class::
19 | 1 | 1 | 479µs | 6.54ms | _full_method_map | Class::MOP::Mixin::HasMethods::
73 | 4 | 4 | 478µs | 16.7ms | compile_type_constraint | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 477µs | 2.22ms | BEGIN@8 | Class::MOP::Package::
1 | 1 | 1 | 476µs | 1.28ms | BEGIN@14 | Class::MOP::
1 | 1 | 1 | 475µs | 7.98ms | define_builtins | Moose::Util::TypeConstraints::Builtins::
190 | 1 | 1 | 474µs | 474µs | _process_does_option | Moose::Meta::Attribute::
22 | 1 | 1 | 473µs | 473µs | _collect_metaroles | Moose::Exporter::
271 | 1 | 1 | 472µs | 482µs | _class_name | Class::MOP::Instance::
1 | 1 | 1 | 472µs | 809µs | BEGIN@35 | Graph::
342 | 8 | 3 | 462µs | 462µs | parent | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 461µs | 1.10ms | BEGIN@7 | Bio::Root::IO::
43 | 1 | 1 | 460µs | 913µs | add_around_modifier | Class::MOP::Method::Wrapped::
20 | 20 | 20 | 457µs | 13.1ms | import | metaclass::
110 | 2 | 1 | 456µs | 666µs | __is_a (recurses: max depth 1, inclusive time 263µs) | Data::OptList::
190 | 1 | 1 | 452µs | 462µs | _process_lazy_build_option | Moose::Meta::Attribute::
1 | 1 | 1 | 451µs | 2.25ms | GetOptionsFromArray | Getopt::Long::
435 | 1 | 1 | 450µs | 450µs | CORE:sort (opcode) | Eval::Closure::
7 | 1 | 1 | 448µs | 4.96ms | get_all_methods | Class::MOP::Class::
207 | 1 | 1 | 447µs | 447µs | new | Moose::Meta::Method::Accessor::
3 | 1 | 1 | 444µs | 697µs | _make_sub_exporter_params | Moose::Exporter::
1 | 1 | 1 | 442µs | 1.34ms | BEGIN@34 | Graph::
1 | 1 | 1 | 441µs | 1.58ms | BEGIN@38 | Moose::
108 | 1 | 1 | 439µs | 3.29ms | _check_single_metaclass_compatibility | Class::MOP::Class::
3 | 3 | 1 | 434µs | 434µs | CORE:open (opcode) | Bio::Roary::InflateClusters::
58 | 1 | 1 | 433µs | 433µs | _mk_collection_builder | Sub::Exporter::
87 | 1 | 1 | 430µs | 628µs | inline_is_slot_initialized | Class::MOP::Instance::
1 | 1 | 1 | 422µs | 525µs | BEGIN@11 | Class::MOP::Class::
464 | 1 | 1 | 421µs | 421µs | definition_context (xsub) | Class::MOP::Mixin::AttributeCore::
190 | 1 | 1 | 420µs | 420µs | _process_lazy_option | Moose::Meta::Attribute::
1 | 1 | 1 | 418µs | 603µs | BEGIN@5 | Graph::MSTHeapElem::
70 | 1 | 1 | 415µs | 415µs | CORE:subst (opcode) | parent::
190 | 1 | 1 | 415µs | 415µs | _process_required_option | Moose::Meta::Attribute::
239 | 2 | 2 | 414µs | 486µs | is_required | Moose::Meta::Mixin::AttributeCore::
190 | 1 | 1 | 413µs | 413µs | _process_coerce_option | Moose::Meta::Attribute::
153 | 3 | 3 | 411µs | 411µs | perlstring (xsub) | B::
1 | 1 | 1 | 409µs | 3.58s | create_output_files | Bio::Roary::Output::NumberOfGroups::
4 | 4 | 1 | 408µs | 993µs | _create_raw_output_file | Bio::Roary::Output::NumberOfGroups::
46 | 1 | 1 | 405µs | 571µs | _inline_fallback_constructor | Class::MOP::Class::
2 | 2 | 1 | 404µs | 404µs | CORE:open (opcode) | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 404µs | 404µs | bootstrap (xsub) | Moose::
1 | 1 | 1 | 404µs | 2.01ms | BEGIN@43 | Moose::
50 | 1 | 1 | 403µs | 52.3ms | _generate_accessor_method | Moose::Meta::Method::Accessor::
1 | 1 | 1 | 403µs | 460µs | BEGIN@1 | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 401µs | 511µs | BEGIN@92 | Bio::Annotation::Collection::
515 | 9 | 3 | 400µs | 400µs | attribute_metaclass (xsub) | Class::MOP::Mixin::HasAttributes::
2 | 2 | 1 | 400µs | 1.01ms | _rmtree (recurses: max depth 1, inclusive time 604µs) | File::Path::
1 | 1 | 1 | 398µs | 581µs | BEGIN@7 | vars::
190 | 1 | 1 | 396µs | 396µs | _process_trigger_option | Moose::Meta::Attribute::
1 | 1 | 1 | 394µs | 443µs | BEGIN@6 | Graph::AdjacencyMatrix::
36 | 1 | 1 | 389µs | 5.67ms | new | Graph::Undirected::
193 | 2 | 1 | 389µs | 437µs | has_handles | Moose::Meta::Mixin::AttributeCore::
1 | 1 | 1 | 389µs | 37.5ms | BEGIN@150 | Bio::Tools::GFF::
1 | 1 | 1 | 388µs | 388µs | CORE:open (opcode) | Bio::Roary::GroupStatistics::
330 | 1 | 1 | 388µs | 388µs | __ANON__[Data/OptList.pm:54] | Data::OptList::
43 | 1 | 1 | 386µs | 14.7ms | add_around_method_modifier | Class::MOP::Class::
190 | 1 | 1 | 386µs | 386µs | _process_auto_deref_option | Moose::Meta::Attribute::
191 | 1 | 1 | 383µs | 431µs | should_auto_deref | Moose::Meta::Mixin::AttributeCore::
5 | 1 | 1 | 383µs | 385µs | _new | Moose::Meta::Role::Method::
48 | 1 | 1 | 380µs | 380µs | _new | Class::MOP::Instance::
17 | 1 | 1 | 380µs | 464µs | ParseOptionSpec | Getopt::Long::
17 | 2 | 1 | 379µs | 5.98ms | _create_type_constraint | Moose::Util::TypeConstraints::
1 | 1 | 1 | 374µs | 466µs | BEGIN@23 | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 373µs | 373µs | CORE:close (opcode) | Bio::Roary::AnnotateGroups::
31 | 1 | 1 | 373µs | 373µs | _do_sorting | Bio::Roary::SplitGroups::
216 | 1 | 1 | 367µs | 367µs | CORE:subst (opcode) | Moose::Meta::Class::
18 | 2 | 2 | 366µs | 14.2ms | initialize | Moose::Meta::Class::
1 | 1 | 1 | 365µs | 1.50ms | BEGIN@14 | Moose::Meta::Role::
1 | 1 | 1 | 365µs | 1.04ms | BEGIN@8 | Moose::Meta::TypeConstraint::Union::
16 | 2 | 2 | 364µs | 1.10ms | _gff_fh_input_string | Bio::Roary::ParseGFFAnnotationRole::
1 | 1 | 1 | 362µs | 362µs | CORE:close (opcode) | Bio::Roary::GroupStatistics::
11 | 1 | 1 | 360µs | 364µs | OVERLOAD | overload::
1 | 1 | 1 | 358µs | 358µs | BEGIN@36 | constant::
190 | 2 | 2 | 357µs | 357µs | __ANON__[Class/MOP.pm:499] | Class::MOP::
300 | 2 | 2 | 355µs | 355µs | is_inlinable | Class::MOP::Instance::
1 | 1 | 1 | 352µs | 473µs | BEGIN@265 | IO::Handle::
2 | 2 | 1 | 350µs | 350µs | CORE:open (opcode) | Bio::Roary::GroupLabels::
36 | 1 | 1 | 350µs | 350µs | elem_DESTROY | Heap071::Fibonacci::
88 | 3 | 1 | 349µs | 349µs | __ANON__[Class/MOP/Method/Wrapped.pm:64] | Class::MOP::Method::Wrapped::
112 | 1 | 1 | 348µs | 348µs | _opt_unknown | Graph::
257 | 2 | 1 | 347µs | 347µs | accessor_metaclass | Class::MOP::Attribute::
799 | 2 | 1 | 346µs | 346µs | CORE:match (opcode) | Exporter::
1 | 1 | 1 | 346µs | 4.14ms | BEGIN@33 | Graph::
44 | 1 | 1 | 342µs | 398µs | _generate_meta_method | Class::MOP::Method::Meta::
82 | 2 | 1 | 340µs | 1.21ms | linearized_isa | Class::MOP::Class::Immutable::Class::MOP::Class::
46 | 1 | 1 | 336µs | 21.5ms | _eval_environment | Class::MOP::Method::Constructor::
17 | 1 | 1 | 334µs | 361µs | _new | Moose::Meta::TypeConstraint::
22 | 1 | 1 | 332µs | 1.03ms | _apply_metaroles | Moose::Exporter::
19 | 19 | 13 | 329µs | 329µs | unimport | warnings::
8 | 1 | 1 | 329µs | 329µs | CORE:close (opcode) | Bio::Roary::GeneNamesFromGFF::
46 | 1 | 1 | 328µs | 1.87ms | _inline_create_instance | Class::MOP::Class::
3 | 1 | 1 | 328µs | 336µs | _new | Moose::Meta::TypeConstraint::Role::
1 | 1 | 1 | 327µs | 443µs | BEGIN@29 | Opcode::
185 | 1 | 1 | 326µs | 326µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:40] | Moose::Util::TypeConstraints::Builtins::
13 | 13 | 13 | 320µs | 339µs | import | Module::Runtime::
424 | 2 | 2 | 319µs | 319µs | is_inline (xsub) | Class::MOP::Method::Generated::
46 | 1 | 1 | 318µs | 626µs | _inline_preserve_weak_metaclasses | Class::MOP::Class::
88 | 1 | 1 | 315µs | 315µs | has_fields | base::
1 | 1 | 1 | 313µs | 351µs | BEGIN@15 | Moose::Object::
1 | 1 | 1 | 312µs | 485µs | BEGIN@36 | Graph::
1 | 1 | 1 | 311µs | 388µs | BEGIN@7 | File::Find::Rule::
207 | 1 | 1 | 311µs | 311µs | accessor_metaclass | Moose::Meta::Attribute::
75 | 2 | 1 | 309µs | 3.62ms | _inline_get_value | Class::MOP::Attribute::
43 | 1 | 1 | 309µs | 309µs | __ANON__[Class/MOP/Method/Wrapped.pm:160] | Class::MOP::Method::Wrapped::
1 | 1 | 1 | 309µs | 1.52ms | BEGIN@13 | Moose::Meta::Role::
67 | 1 | 1 | 303µs | 303µs | _new | Graph::AdjacencyMap::
207 | 1 | 1 | 303µs | 303µs | _new | Moose::Meta::Method::Accessor::
25 | 1 | 1 | 300µs | 300µs | max_recursion | Bio::Roary::SplitGroups::
16 | 1 | 1 | 297µs | 1.99ms | _inline_BUILDARGS | Moose::Meta::Class::
1 | 1 | 1 | 296µs | 3.82ms | BEGIN@14 | Moose::
1 | 1 | 1 | 296µs | 21.6ms | BEGIN@25 | constant::
1 | 1 | 1 | 295µs | 1.86ms | BEGIN@28 | Moose::
17 | 1 | 1 | 294µs | 7.33ms | attribute_for_class | Moose::Meta::Role::Attribute::
4 | 1 | 1 | 293µs | 35.2ms | apply_attributes | Moose::Meta::Role::Application::ToClass::
1 | 1 | 1 | 291µs | 585µs | BEGIN@10 | MRO::Compat::
1 | 1 | 1 | 291µs | 730µs | BEGIN@9 | Class::MOP::Mixin::AttributeCore::
1 | 1 | 1 | 291µs | 751µs | BEGIN@266 | IO::Handle::
3 | 1 | 1 | 291µs | 372µs | _new | Moose::Meta::Role::
362 | 1 | 1 | 290µs | 290µs | definition_context (xsub) | Class::MOP::Method::Generated::
1 | 1 | 1 | 290µs | 290µs | CORE:close (opcode) | Bio::Roary::InflateClusters::
8 | 1 | 1 | 286µs | 286µs | CORE:close (opcode) | Bio::Roary::ContigsToGeneIDsFromGFF::
1 | 1 | 1 | 286µs | 355µs | BEGIN@6 | Exception::Class::Base::
237 | 1 | 1 | 286µs | 286µs | is_dependent_on_superclasses | Class::MOP::Instance::
4 | 1 | 1 | 284µs | 284µs | CORE:close (opcode) | Bio::Roary::Output::NumberOfGroups::
20 | 1 | 1 | 284µs | 1.09ms | _superclasses_updated | Class::MOP::Class::
317 | 1 | 1 | 284µs | 284µs | isweak (xsub) | Scalar::Util::
52 | 1 | 1 | 283µs | 427µs | _inline_get_old_value_for_trigger | Moose::Meta::Attribute::
52 | 1 | 1 | 282µs | 496µs | _inline_check_required | Moose::Meta::Attribute::
8 | 1 | 1 | 281µs | 281µs | CORE:unlink (opcode) | File::Path::
46 | 1 | 1 | 280µs | 2.15ms | _inline_generate_instance | Class::MOP::Class::
8 | 1 | 1 | 279µs | 1.66s | ids_to_gene_name | Bio::Roary::GeneNamesFromGFF::
1 | 1 | 1 | 278µs | 726µs | BEGIN@79 | Bio::Location::Atomic::
20 | 1 | 1 | 276µs | 597µs | equals | Moose::Meta::TypeConstraint::
23 | 2 | 2 | 275µs | 5.79ms | _generate_predicate_method_inline | Class::MOP::Method::Accessor::
4 | 1 | 1 | 274µs | 274µs | CORE:open (opcode) | Bio::Roary::Output::NumberOfGroups::
142 | 7 | 1 | 274µs | 274µs | constructor_class | Moose::Meta::Class::
22 | 1 | 1 | 269µs | 391µs | _strip_traits | Moose::Exporter::
8 | 1 | 1 | 265µs | 298µs | DESTROY | Bio::Roary::GeneNamesFromGFF::
1 | 1 | 1 | 262µs | 56.5s | run | Bio::Roary::PostAnalysis::
26 | 14 | 4 | 262µs | 2.66ms | has | Moose::Role::
52 | 1 | 1 | 262µs | 375µs | _inline_trigger | Moose::Meta::Attribute::
2 | 2 | 1 | 261µs | 261µs | CORE:close (opcode) | Bio::Roary::SplitGroups::
651 | 2 | 1 | 260µs | 260µs | CORE:subst (opcode) | Exporter::
1 | 1 | 1 | 259µs | 340µs | BEGIN@18 | Moose::Meta::Class::
90 | 2 | 2 | 255µs | 255µs | store_metaclass_by_name | Class::MOP::
326 | 8 | 2 | 254µs | 254µs | method_metaclass (xsub) | Class::MOP::Mixin::HasMethods::
301 | 1 | 1 | 253µs | 253µs | reader (xsub) | Class::MOP::Mixin::AttributeCore::
142 | 7 | 1 | 253µs | 253µs | destructor_class | Moose::Meta::Class::
62 | 2 | 1 | 250µs | 250µs | _add_inlined_method | Class::MOP::Class::
30 | 1 | 1 | 248µs | 55.7ms | _initialize_body | Class::MOP::Method::Constructor::
6 | 1 | 1 | 246µs | 2.21ms | _rewrite_build_config | Sub::Exporter::
38 | 2 | 2 | 242µs | 2.60s | postorder | Graph::Traversal::
38 | 1 | 1 | 238µs | 293µs | directed | Graph::
17 | 17 | 17 | 235µs | 1.94ms | unimport | Moose::
300 | 8 | 1 | 235µs | 235µs | wrapped_method_metaclass (xsub) | Class::MOP::Mixin::HasMethods::
48 | 1 | 1 | 234µs | 234µs | __ANON__[Moose/Meta/TypeConstraint.pm:72] | Moose::Meta::TypeConstraint::
88 | 1 | 1 | 234µs | 234µs | has_attr | base::
1 | 1 | 1 | 233µs | 236µs | BEGIN@731 | Data::Dumper::
10 | 1 | 1 | 233µs | 351µs | _shuffle_input_files | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 232µs | 311µs | BEGIN@12 | Moose::Meta::Role::
380 | 4 | 2 | 231µs | 231µs | _CODELIKE (xsub) | Params::Util::
2 | 2 | 2 | 228µs | 4.96s | new | Bio::Roary::AnalyseGroups::
8 | 1 | 1 | 226µs | 1.03ms | is_subtype_of | Moose::Meta::TypeConstraint::
316 | 2 | 1 | 224µs | 224µs | CORE:match (opcode) | Opcode::
194 | 1 | 1 | 222µs | 222µs | CORE:subst (opcode) | Moose::Util::TypeConstraints::
16 | 4 | 3 | 221µs | 577µs | can_be_inlined | Moose::Meta::TypeConstraint::Parameterized::
3 | 1 | 1 | 221µs | 2.97ms | build_import_methods | Moose::Exporter::
46 | 2 | 2 | 218µs | 218µs | shuffle (xsub) | List::Util::
1 | 1 | 1 | 218µs | 230µs | new | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 215µs | 361µs | BEGIN@198 | Bio::Tools::CodonTable::
4 | 1 | 1 | 215µs | 3.70ms | apply_methods | Moose::Meta::Role::Application::ToClass::
2 | 1 | 1 | 214µs | 223µs | _new | Moose::Meta::TypeConstraint::Parameterized::
2 | 2 | 1 | 213µs | 213µs | CORE:close (opcode) | Bio::Roary::GroupLabels::
2 | 2 | 1 | 211µs | 238µs | new | Bio::Roary::Output::EmblGroups::
333 | 6 | 1 | 211µs | 211µs | CORE:regcomp (opcode) | Getopt::Long::
70 | 1 | 1 | 210µs | 210µs | does_metaclass_exist | Class::MOP::
1 | 1 | 1 | 210µs | 5.23ms | CORE:regcomp (opcode) | Safe::
46 | 1 | 1 | 206µs | 64.5ms | try {...} | Class::MOP::Method::Constructor::
108 | 4 | 3 | 205µs | 205µs | name | Moose::Meta::TypeConstraint::
12 | 2 | 1 | 204µs | 204µs | CORE:subst (opcode) | DynaLoader::
38 | 2 | 1 | 201µs | 490µs | expect_undirected | Graph::
37 | 2 | 2 | 200µs | 227µs | get_attribute_list | Class::MOP::Mixin::HasAttributes::
56 | 4 | 2 | 199µs | 471µs | first (xsub) | List::Util::
374 | 11 | 1 | 198µs | 198µs | CORE:match (opcode) | Getopt::Long::
16 | 1 | 1 | 197µs | 1.60ms | is_needed | Moose::Meta::Method::Destructor::
4 | 1 | 1 | 195µs | 62.1ms | _apply_all_roles | Moose::Util::
10 | 3 | 3 | 192µs | 518µs | inline_environment | Moose::Meta::TypeConstraint::Parameterized::
2 | 1 | 1 | 190µs | 350µs | _make_subclass | Exception::Class::
249 | 6 | 4 | 190µs | 190µs | name (xsub) | Class::MOP::Method::
18 | 1 | 1 | 189µs | 370µs | _class_metaclass_is_compatible | Class::MOP::Class::
36 | 1 | 1 | 189µs | 189µs | new | Heap071::Fibonacci::
36 | 1 | 1 | 189µs | 539µs | DESTROY | Heap071::Fibonacci::
18 | 2 | 1 | 188µs | 1.86ms | mkopt_hash | Data::OptList::
36 | 1 | 1 | 184µs | 184µs | __ANON__[Graph.pm:2745] | Graph::
66 | 3 | 1 | 184µs | 184µs | firstidx (xsub) | List::MoreUtils::
83 | 1 | 1 | 184µs | 184µs | class | Moose::Meta::TypeConstraint::Class::
36 | 1 | 1 | 183µs | 2.40ms | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:114] | Moose::Util::TypeConstraints::Builtins::
22 | 1 | 1 | 182µs | 212µs | _strip_metaclass | Moose::Exporter::
21 | 1 | 1 | 178µs | 8.18ms | wrap | Moose::Meta::Method::Meta::
1 | 1 | 1 | 174µs | 177µs | BEGIN@93 | Bio::RangeI::
3 | 3 | 3 | 170µs | 9.26ms | import | Moose::Role::
96 | 5 | 3 | 169µs | 169µs | associated_metaclass | Class::MOP::Method::
67 | 1 | 1 | 168µs | 168µs | _ids | Graph::AdjacencyMap::
44 | 2 | 1 | 167µs | 372µs | __ANON__[Moose/Exporter.pm:39] | Moose::Exporter::
122 | 1 | 1 | 164µs | 164µs | __ANON__[Moose/Exporter.pm:317] | Moose::Exporter::
13 | 13 | 13 | 162µs | 162µs | import | List::Util::
22 | 1 | 1 | 162µs | 194µs | _strip_meta_name | Moose::Exporter::
1 | 1 | 1 | 161µs | 161µs | BEGIN@21 | Errno::
120 | 1 | 1 | 160µs | 160µs | _percentage_of_largest_weak_threshold | Bio::Roary::OrderGenes::
4 | 1 | 1 | 158µs | 40.3ms | apply | Moose::Meta::Role::Application::
1 | 1 | 1 | 158µs | 200µs | new | Bio::Roary::Output::NumberOfGroups::
2 | 1 | 1 | 158µs | 297µs | _read_file_into_array | Bio::Roary::CommandLine::RoaryPostAnalysis::
38 | 1 | 1 | 158µs | 177µs | countvertexed | Graph::
4 | 1 | 1 | 156µs | 162µs | _new | Moose::Meta::TypeConstraint::Parameterizable::
16 | 1 | 1 | 154µs | 5.71ms | subtype | Moose::Util::TypeConstraints::
3 | 1 | 1 | 153µs | 4.76ms | init_meta | Moose::Role::
8 | 1 | 1 | 153µs | 283µs | _awk_filter | Bio::Roary::ContigsToGeneIDsFromGFF::
16 | 1 | 1 | 152µs | 622µs | _immutable_options | Moose::Meta::Class::
76 | 1 | 1 | 151µs | 151µs | graph | Graph::Traversal::
44 | 3 | 1 | 151µs | 151µs | _sub_from_package | Moose::Exporter::
189 | 1 | 1 | 149µs | 149µs | associated_methods (xsub) | Class::MOP::Attribute::
47 | 2 | 1 | 149µs | 149µs | _inline_throw_exception | Moose::Meta::Class::
8 | 1 | 1 | 149µs | 180µs | DESTROY | Bio::Roary::ContigsToGeneIDsFromGFF::
8 | 1 | 1 | 149µs | 282µs | _awk_filter | Bio::Roary::GeneNamesFromGFF::
184 | 4 | 1 | 148µs | 148µs | constructor_class (xsub) | Class::MOP::Class::
13 | 1 | 1 | 145µs | 968µs | add_attribute | Moose::Meta::Role::
11 | 2 | 1 | 145µs | 145µs | _conserved_genes | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 142µs | 162µs | BEGIN@3051 | B::Deparse::
46 | 1 | 1 | 142µs | 142µs | inline_create_instance | Class::MOP::Instance::
16 | 1 | 1 | 142µs | 1.96ms | _generate_DEMOLISHALL | Moose::Meta::Method::Destructor::
6 | 2 | 2 | 140µs | 572µs | initialize | Class::MOP::Package::
1 | 1 | 1 | 140µs | 169µs | BEGIN@4 | Sub::Install::
1 | 1 | 1 | 139µs | 355µs | AUTOLOAD | AutoLoader::
1 | 1 | 1 | 137µs | 2.69ms | new | Bio::Roary::CommandLine::RoaryPostAnalysis::
11 | 1 | 1 | 136µs | 136µs | number_of_iterations | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 136µs | 1.29ms | rmtree | File::Path::
16 | 1 | 1 | 136µs | 114ms | _initialize_body | Moose::Meta::Method::Constructor::
1 | 1 | 1 | 136µs | 5.78ms | BEGIN@20 | Bio::Roary::InflateClusters::
8 | 2 | 2 | 136µs | 459µs | class_precedence_list (recurses: max depth 1, inclusive time 152µs) | Class::MOP::Class::
184 | 4 | 1 | 136µs | 136µs | destructor_class (xsub) | Class::MOP::Class::
45 | 1 | 1 | 135µs | 135µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:52] | Moose::Util::TypeConstraints::Builtins::
12 | 1 | 1 | 135µs | 326µs | get_raw_value | Class::MOP::Attribute::
1 | 1 | 1 | 134µs | 1.83s | new | Bio::Roary::AnnotateGroups::
21 | 1 | 1 | 134µs | 157µs | _generate_accessor_method | Class::MOP::Method::Accessor::
2 | 1 | 1 | 133µs | 433µs | remove_attribute | Class::MOP::Class::
1 | 1 | 1 | 132µs | 132µs | bootstrap (xsub) | List::MoreUtils::
36 | 1 | 1 | 130µs | 130µs | CORE:ftdir (opcode) | DynaLoader::
12 | 1 | 1 | 130µs | 299µs | has_value | Class::MOP::Attribute::
16 | 1 | 1 | 130µs | 2.56ms | _inline_BUILDALL | Moose::Meta::Class::
22 | 2 | 2 | 130µs | 8.28ms | _load_user_class (recurses: max depth 1, inclusive time 96µs) | Moose::Util::
16 | 1 | 1 | 130µs | 6.48ms | _inline_extra_init | Moose::Meta::Class::
1 | 1 | 1 | 128µs | 176µs | new | Text::CSV_PP::
3 | 3 | 3 | 127µs | 540µs | import | Package::DeprecationManager::
1 | 1 | 1 | 127µs | 127µs | _set_methods | Text::CSV::
172 | 1 | 1 | 126µs | 126µs | CORE:match (opcode) | Moose::Meta::Class::
1 | 1 | 1 | 126µs | 1.54ms | BEGIN@17 | Package::Stash::
8 | 1 | 1 | 125µs | 1.23ms | generate_constraint_for | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 123µs | 171µs | new | Bio::Roary::OrderGenes::
1 | 1 | 1 | 122µs | 122µs | BEGIN@27 | Storable::
55 | 1 | 1 | 122µs | 122µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:252] | Moose::Util::TypeConstraints::Builtins::
103 | 4 | 3 | 122µs | 122µs | is_mutable | Class::MOP::Class::
13 | 1 | 1 | 122µs | 122µs | new | Moose::Meta::Role::Attribute::
1 | 1 | 1 | 120µs | 2.54ms | BUILD | Bio::Roary::CommandLine::RoaryPostAnalysis::
19 | 2 | 2 | 118µs | 6.66ms | _get_local_methods | Class::MOP::Mixin::HasMethods::
16 | 1 | 1 | 117µs | 4.15ms | create_child_type | Moose::Meta::TypeConstraint::
17 | 1 | 1 | 117µs | 196µs | original_role | Moose::Meta::Role::Attribute::
1 | 1 | 1 | 116µs | 116µs | import | subs::
11 | 11 | 10 | 115µs | 479µs | import | overload::
2 | 2 | 1 | 115µs | 132µs | valid_aa | Bio::SeqUtils::
32 | 2 | 1 | 115µs | 115µs | immutable_trait | Moose::Meta::Class::
3 | 3 | 1 | 113µs | 113µs | CORE:regcomp (opcode) | Module::Runtime::
22 | 1 | 1 | 112µs | 1.37ms | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:106] | Moose::Util::TypeConstraints::Builtins::
48 | 1 | 1 | 112µs | 112µs | _has_compiled_type_constraint | Moose::Meta::TypeConstraint::
90 | 3 | 2 | 112µs | 112µs | associated_metaclass | Class::MOP::Method::Constructor::
8 | 1 | 1 | 110µs | 110µs | CORE:match (opcode) | Eval::Closure::Sandbox_295::
1 | 1 | 1 | 110µs | 689µs | new | Bio::Roary::SplitGroups::
4 | 1 | 1 | 109µs | 41.1ms | apply | Moose::Meta::Role::
2 | 1 | 1 | 109µs | 2.14ms | compile_type_constraint | Moose::Meta::TypeConstraint::Parameterized::
40 | 1 | 1 | 108µs | 134µs | __ANON__[Moose/Meta/TypeConstraint.pm:8] | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 107µs | 364µs | _gettemp | File::Temp::
108 | 2 | 1 | 106µs | 106µs | immutable_trait (xsub) | Class::MOP::Class::
8 | 1 | 1 | 104µs | 2.94ms | _generate_clearer_method_inline | Class::MOP::Method::Accessor::
2 | 2 | 2 | 104µs | 7.62ms | import | Moose::Util::TypeConstraints::
46 | 1 | 1 | 103µs | 103µs | options | Class::MOP::Method::Constructor::
22 | 1 | 1 | 103µs | 103µs | _get_caller | Moose::Exporter::
18 | 1 | 1 | 102µs | 472µs | _check_class_metaclass_compatibility | Class::MOP::Class::
1 | 1 | 1 | 101µs | 120µs | new | Bio::Roary::GroupStatistics::
16 | 1 | 1 | 101µs | 2.09ms | _inline_params | Moose::Meta::Class::
1 | 1 | 1 | 100µs | 1.42ms | DESTROY | File::Temp::Dir::
1 | 1 | 1 | 100µs | 2.18ms | BEGIN@29 | B::Deparse::
23 | 1 | 1 | 100µs | 579µs | _inline_has_value | Class::MOP::Attribute::
1 | 1 | 1 | 100µs | 2.75s | _build__analyse_groups_obj | Bio::Roary::SplitGroups::
1 | 1 | 1 | 100µs | 100µs | CORE:mkdir (opcode) | File::Temp::
3 | 1 | 1 | 99µs | 210µs | caller_info | Carp::
4 | 1 | 1 | 99µs | 40.6ms | apply | Moose::Meta::Role::Application::ToClass::
4 | 1 | 1 | 98µs | 624µs | excludes_role | Moose::Meta::Class::
9 | 2 | 2 | 98µs | 154µs | catfile (xsub) | File::Spec::Unix::
2 | 1 | 1 | 98µs | 2.96ms | create | Class::MOP::Class::
190 | 1 | 1 | 97µs | 97µs | CORE:sort (opcode) | Moose::Meta::Attribute::
4 | 1 | 1 | 97µs | 117µs | _new | Moose::Meta::Role::Application::ToClass::
2 | 1 | 1 | 96µs | 1.32s | _files_to_genes | Bio::Roary::AnalyseGroups::
1 | 1 | 1 | 96µs | 12.4s | _build__group_statistics_obj | Bio::Roary::PostAnalysis::
179 | 2 | 1 | 96µs | 96µs | _is_COUNT (xsub) | Graph::AdjacencyMap::Light::
30 | 1 | 1 | 96µs | 96µs | _inline_params | Class::MOP::Class::
76 | 1 | 1 | 95µs | 95µs | _is_HYPER (xsub) | Graph::AdjacencyMap::Light::
19 | 1 | 1 | 94µs | 94µs | opset (xsub) | Opcode::
5 | 5 | 1 | 94µs | 1.83s | _annotate_groups_obj | Bio::Roary::PostAnalysis::
28 | 3 | 1 | 94µs | 94µs | CORE:readline (opcode) | Opcode::
40 | 1 | 1 | 93µs | 93µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:217] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 92µs | 115µs | import | Graph::Attribute::
13 | 1 | 1 | 92µs | 119µs | attach_to_role | Moose::Meta::Role::Attribute::
2 | 1 | 1 | 92µs | 92µs | CORE:open (opcode) | Bio::Roary::CommandLine::RoaryPostAnalysis::
23 | 1 | 1 | 92µs | 218µs | is_immutable | Class::MOP::Class::Immutable::Class::MOP::Class::
15 | 1 | 1 | 92µs | 106µs | _generate_predicate_method | Class::MOP::Method::Accessor::
4 | 4 | 1 | 89µs | 2.71s | _analyse_groups_obj | Bio::Roary::PostAnalysis::
16 | 2 | 1 | 89µs | 134µs | get_method_modifier_list | Moose::Meta::Role::
2 | 1 | 1 | 89µs | 184µs | output_header_filename | Bio::Roary::Output::EmblGroups::
8 | 1 | 1 | 89µs | 174µs | _inline_instance_clear | Class::MOP::Attribute::
128 | 2 | 1 | 89µs | 89µs | builder (xsub) | Class::MOP::Mixin::AttributeCore::
1 | 1 | 1 | 87µs | 87µs | _create_getline_subs (xsub) | IO::Handle::
3 | 1 | 1 | 87µs | 1.95ms | new | Moose::Meta::TypeConstraint::Role::
48 | 2 | 1 | 87µs | 87µs | __ANON__[Moose/Meta/TypeConstraint.pm:89] | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 86µs | 216µs | find_filename | AutoLoader::
5 | 5 | 5 | 86µs | 733µs | import | warnings::register::
1 | 1 | 1 | 86µs | 378µs | _number_of_groups_obj | Bio::Roary::PostAnalysis::
8 | 1 | 1 | 86µs | 118µs | _build__awk_filter | Bio::Roary::ParseGFFAnnotationRole::
8 | 1 | 1 | 85µs | 85µs | gff_file | Bio::Roary::GeneNamesFromGFF::
71 | 1 | 1 | 85µs | 85µs | is_immutable | Class::MOP::Class::
2 | 1 | 1 | 84µs | 4.96s | BUILD | Bio::Roary::AnalyseGroups::
1 | 1 | 1 | 84µs | 3.03s | _split_groups | Bio::Roary::AnnotateGroups::
20 | 2 | 2 | 83µs | 83µs | is_class_loaded (xsub) | Class::Load::XS::
14 | 1 | 1 | 83µs | 1.64ms | export | Exporter::
10 | 10 | 1 | 83µs | 193µs | meta | Moose::Meta::TypeConstraint::
3 | 3 | 2 | 83µs | 83µs | abs_path (xsub) | Cwd::
1 | 1 | 1 | 82µs | 82µs | opset_to_ops (xsub) | Opcode::
2 | 1 | 1 | 82µs | 3.18s | _freq_groups_per_genome | Bio::Roary::AnalyseGroups::
8 | 1 | 1 | 82µs | 82µs | gff_file | Bio::Roary::ContigsToGeneIDsFromGFF::
3 | 3 | 3 | 81µs | 81µs | getcwd (xsub) | Cwd::
1 | 1 | 1 | 80µs | 83µs | new | Bio::Roary::GroupLabels::
2 | 1 | 1 | 80µs | 460ms | _groups_to_genes | Bio::Roary::AnalyseGroups::
2 | 1 | 1 | 80µs | 1.40s | _check_cache | Graph::
4 | 4 | 1 | 79µs | 9.70s | groups_to_contigs | Bio::Roary::OrderGenes::
17 | 1 | 1 | 79µs | 12.1ms | class_type | Moose::Util::TypeConstraints::
95 | 2 | 1 | 79µs | 79µs | accessor (xsub) | Class::MOP::Mixin::AttributeCore::
12 | 2 | 1 | 78µs | 78µs | dl_find_symbol (xsub) | DynaLoader::
1 | 1 | 1 | 78µs | 1.40ms | BEGIN@18 | Try::Tiny::
30 | 1 | 1 | 77µs | 77µs | _generate_fallback_constructor | Class::MOP::Class::
6 | 1 | 1 | 76µs | 96µs | format_arg | Carp::
34 | 4 | 1 | 76µs | 76µs | CORE:regcomp (opcode) | constant::
3 | 1 | 1 | 76µs | 184µs | short_error_loc | Carp::
3 | 1 | 1 | 76µs | 2.12ms | create_role_type_constraint | Moose::Util::TypeConstraints::
1 | 1 | 1 | 76µs | 76µs | bootstrap (xsub) | Params::Util::
70 | 1 | 1 | 75µs | 75µs | constructor_name (xsub) | Class::MOP::Class::
2 | 1 | 1 | 74µs | 2.66ms | parameterize | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 74µs | 74µs | BEGIN@1 | Text::CSV::
33 | 4 | 1 | 73µs | 73µs | CORE:match (opcode) | Moose::Util::TypeConstraints::
32 | 1 | 1 | 73µs | 73µs | _set_original_method | Class::MOP::Method::
6 | 2 | 2 | 73µs | 704µs | _inline_check | Moose::Meta::TypeConstraint::Parameterized::
1 | 1 | 1 | 73µs | 138µs | BEGIN@190 | Sub::Install::
101 | 1 | 1 | 73µs | 73µs | CORE:subst (opcode) | Opcode::
3 | 1 | 1 | 72µs | 523µs | initialize | Moose::Meta::Role::
1 | 1 | 1 | 72µs | 95µs | sub_export_options | Sub::Exporter::Progressive::
16 | 1 | 1 | 71µs | 3.03ms | try {...} | Moose::Meta::Method::Destructor::
6 | 1 | 1 | 71µs | 71µs | _key_intersection | Sub::Exporter::
20 | 1 | 1 | 71µs | 71µs | _superclass_metas | Class::MOP::Class::
6 | 1 | 1 | 71µs | 462µs | generate_inline_for | Moose::Meta::TypeConstraint::Parameterizable::
31 | 1 | 1 | 70µs | 70µs | CORE:match (opcode) | constant::
8 | 1 | 1 | 70µs | 2.87ms | _generate_predicate_method | Moose::Meta::Method::Accessor::
7 | 1 | 1 | 70µs | 75µs | list_all_symbols (xsub) | Package::Stash::XS::
7 | 1 | 1 | 69µs | 197µs | _detect_type_constraint_union | Moose::Util::TypeConstraints::
8 | 1 | 1 | 69µs | 3.10ms | _generate_clearer_method | Moose::Meta::Method::Accessor::
2 | 2 | 1 | 69µs | 12.4s | _group_statistics_obj | Bio::Roary::PostAnalysis::
2 | 1 | 1 | 69µs | 475µs | create | Class::MOP::Module::
4 | 1 | 1 | 67µs | 77µs | mycan | overload::
2 | 1 | 1 | 67µs | 503µs | _build__output_header_fh | Bio::Roary::Output::EmblGroups::
8 | 1 | 1 | 66µs | 117µs | _build__awk_filter | Bio::Roary::ContigsToGeneIDsFromGFF::
31 | 1 | 1 | 66µs | 66µs | _is_COUNT | Graph::AdjacencyMap::
12 | 3 | 1 | 66µs | 159µs | apply_method_modifiers | Moose::Meta::Role::Application::ToClass::
6 | 3 | 2 | 65µs | 2.28ms | build_exporter | Sub::Exporter::
2 | 1 | 1 | 65µs | 2.07ms | _load_implementation | Module::Implementation::
62 | 1 | 1 | 64µs | 64µs | _expected_method_class (xsub) | Class::MOP::Method::Inlined::
10 | 2 | 1 | 64µs | 64µs | CORE:sort (opcode) | Bio::Roary::Output::EmblGroups::
1 | 1 | 1 | 64µs | 4.69ms | BEGIN@18 | Bio::Roary::OrderGenes::
2 | 1 | 1 | 64µs | 64µs | CORE:sort (opcode) | Bio::Roary::OrderGenes::
1 | 1 | 1 | 64µs | 64µs | BEGIN@172 | Bio::Tools::IUPAC::
10 | 2 | 1 | 63µs | 63µs | _mkMask | warnings::
1 | 1 | 1 | 63µs | 2.45s | _groups_to_file_contigs | Bio::Roary::OrderGenes::
36 | 5 | 2 | 63µs | 63µs | type_parameter | Moose::Meta::TypeConstraint::Parameterized::
16 | 1 | 1 | 62µs | 62µs | _make_wrapped_sub_with_meta | Moose::Exporter::
7 | 1 | 1 | 62µs | 148µs | list_all_package_symbols | Class::MOP::Package::
11 | 2 | 1 | 62µs | 62µs | _unique_genes | Bio::Roary::Output::NumberOfGroups::
21 | 2 | 2 | 62µs | 62µs | __ANON__[Class/MOP.pm:139] | Class::MOP::
1 | 1 | 1 | 62µs | 5.15ms | BEGIN@17 | Bio::Roary::Output::NumberOfGroups::
2 | 2 | 1 | 61µs | 1.40s | connected_components | Graph::
23 | 1 | 1 | 61µs | 61µs | _get_mutable_metaclass_name | Class::MOP::Class::Immutable::Trait::
1 | 1 | 1 | 60µs | 1.83s | _build__annotate_groups_obj | Bio::Roary::PostAnalysis::
4 | 4 | 1 | 60µs | 285µs | _order_genes_obj | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 60µs | 104µs | _replace_XX | File::Temp::
1 | 1 | 1 | 59µs | 82µs | BEGIN@30 | Safe::
7 | 4 | 3 | 59µs | 59µs | fasta_files | Bio::Roary::AnalyseGroups::
1 | 1 | 1 | 59µs | 216µs | _group_labels_obj | Bio::Roary::PostAnalysis::
16 | 1 | 1 | 59µs | 59µs | _generate_fallback_constructor | Moose::Meta::Class::
1 | 1 | 1 | 59µs | 4.52ms | BEGIN@19 | Bio::Roary::Output::EmblGroups::
1 | 1 | 1 | 59µs | 526µs | newdir | File::Temp::
1 | 1 | 1 | 58µs | 60µs | BEGIN@106 | Moose::Object::
6 | 6 | 6 | 58µs | 58µs | __ANON__[Package/DeprecationManager.pm:61] | Package::DeprecationManager::
16 | 1 | 1 | 58µs | 58µs | _generate_fallback_destructor | Moose::Meta::Method::Destructor::
8 | 1 | 1 | 58µs | 58µs | __ANON__[lib/Bio/Roary/GeneNamesFromGFF.pm:23] | Bio::Roary::GeneNamesFromGFF::
1 | 1 | 1 | 58µs | 251µs | init | FindBin::
60 | 2 | 1 | 57µs | 57µs | _HASHLIKE (xsub) | Params::Util::
1 | 1 | 1 | 57µs | 4.22ms | BEGIN@19 | Bio::Roary::GroupStatistics::
8 | 5 | 5 | 57µs | 124ms | with | Moose::
40 | 1 | 1 | 57µs | 57µs | _flag_as_reexport (xsub) | Moose::Exporter::
10 | 2 | 1 | 56µs | 56µs | CORE:lstat (opcode) | File::Path::
26 | 2 | 1 | 56µs | 56µs | has_parameterized_from | Moose::Meta::TypeConstraint::Parameterized::
32 | 3 | 1 | 56µs | 56µs | parameterized_from | Moose::Meta::TypeConstraint::Parameterized::
2 | 1 | 1 | 56µs | 88µs | _build__sorted_file_names | Bio::Roary::Output::EmblGroups::
8 | 1 | 1 | 55µs | 55µs | __ANON__[lib/Bio/Roary/ContigsToGeneIDsFromGFF.pm:24] | Bio::Roary::ContigsToGeneIDsFromGFF::
1 | 1 | 1 | 55µs | 56µs | new | Bio::Roary::InflateClusters::
1 | 1 | 1 | 55µs | 55µs | BEGIN@14 | Bio::Roary::Main::RoaryPostAnalysis::
1 | 1 | 1 | 55µs | 161µs | _header | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 54µs | 2.71s | _build__analyse_groups_obj | Bio::Roary::PostAnalysis::
3 | 3 | 3 | 54µs | 54µs | import | Config::
4 | 1 | 1 | 54µs | 727µs | check_role_exclusions | Moose::Meta::Role::Application::ToClass::
1 | 1 | 1 | 54µs | 54µs | CORE:fteread (opcode) | AutoLoader::
2 | 1 | 1 | 54µs | 64µs | _build_loader | Module::Implementation::
7 | 1 | 1 | 53µs | 125µs | _detect_parameterized_type_constraint | Moose::Util::TypeConstraints::
3 | 1 | 1 | 53µs | 53µs | _make_init_meta | Moose::Exporter::
11 | 4 | 3 | 53µs | 63µs | catdir (xsub) | File::Spec::Unix::
72 | 2 | 2 | 52µs | 52µs | refaddr (xsub) | Scalar::Util::
2 | 1 | 1 | 52µs | 102µs | remove_method | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 52µs | 52µs | BEGIN@45 | Exception::Class::Base::
6 | 1 | 1 | 52µs | 81µs | __ANON__[Moose/Meta/TypeConstraint/Role.pm:27] | Moose::Meta::TypeConstraint::Role::
2 | 2 | 2 | 51µs | 5.70ms | import | POSIX::
1 | 1 | 1 | 50µs | 5.78ms | BEGIN@19 | Bio::Roary::AnnotateGroups::
8 | 1 | 1 | 50µs | 50µs | _tags_to_filter | Bio::Roary::ContigsToGeneIDsFromGFF::
20 | 1 | 1 | 50µs | 50µs | update_meta_instance_dependencies | Class::MOP::Class::
1 | 1 | 1 | 50µs | 83µs | _is_subdir | File::Path::
11 | 2 | 1 | 50µs | 50µs | _total_genes | Bio::Roary::Output::NumberOfGroups::
53 | 1 | 1 | 50µs | 50µs | predicate (xsub) | Class::MOP::Mixin::AttributeCore::
1 | 1 | 1 | 50µs | 584µs | BEGIN@9 | List::MoreUtils::
1 | 1 | 1 | 49µs | 5.16ms | BEGIN@19 | Bio::Roary::Output::GroupsMultifastasNucleotide::
1 | 1 | 1 | 48µs | 4.57ms | BEGIN@17 | Bio::Roary::Output::GroupsMultifastaNucleotide::
1 | 1 | 1 | 48µs | 4.42ms | BEGIN@23 | Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::
3 | 3 | 3 | 48µs | 3.02ms | setup_import_methods | Moose::Exporter::
6 | 1 | 1 | 48µs | 48µs | dl_install_xsub (xsub) | DynaLoader::
1 | 1 | 1 | 48µs | 48µs | CORE:rmdir (opcode) | File::Path::
6 | 1 | 1 | 47µs | 368µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:292] | Moose::Util::TypeConstraints::Builtins::
2 | 1 | 1 | 47µs | 90µs | _build_output_header_filename | Bio::Roary::Output::EmblGroups::
1 | 1 | 1 | 47µs | 4.30ms | BEGIN@19 | Bio::Roary::AnalyseGroups::
18 | 2 | 1 | 47µs | 47µs | CORE:readline (opcode) | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 47µs | 146µs | _build__group_labels_obj | Bio::Roary::PostAnalysis::
5 | 5 | 5 | 47µs | 180µs | __ANON__[Sub/Install.pm:284] | Sub::Install::
11 | 8 | 4 | 46µs | 46µs | FETCH | Config::
25 | 2 | 1 | 46µs | 46µs | _meta_method_class | Class::MOP::Mixin::HasMethods::
11 | 2 | 1 | 46µs | 46µs | _new_genes | Bio::Roary::Output::NumberOfGroups::
3 | 1 | 1 | 46µs | 669µs | _generate_writer_method_inline | Class::MOP::Method::Accessor::
1 | 1 | 1 | 46µs | 284µs | _build__number_of_groups_obj | Bio::Roary::PostAnalysis::
17 | 1 | 1 | 46µs | 46µs | applied_attribute_metaclass | Moose::Meta::Role::
2 | 1 | 1 | 46µs | 231µs | remove_accessors | Class::MOP::Attribute::
34 | 1 | 1 | 46µs | 46µs | _export_is_flagged (xsub) | Moose::Exporter::
4 | 1 | 1 | 45µs | 65µs | add_role | Moose::Meta::Class::
7 | 1 | 1 | 45µs | 62µs | is_method_excluded | Moose::Meta::Role::Application::
1 | 1 | 1 | 45µs | 221µs | new | Text::CSV::
2 | 1 | 1 | 44µs | 52µs | get_attribute | Graph::Attribute::
2 | 1 | 1 | 44µs | 63µs | set_attribute | Graph::Attribute::
1 | 1 | 1 | 44µs | 4.98ms | BEGIN@17 | Bio::Roary::GeneNamesFromGFF::
1 | 1 | 1 | 44µs | 52µs | DESTROY | Bio::Roary::InflateClusters::
1 | 1 | 1 | 44µs | 45µs | cleanup | File::Temp::
2 | 1 | 1 | 43µs | 341µs | _build__output_fh | Bio::Roary::Output::EmblGroups::
2 | 2 | 2 | 43µs | 968µs | setup_exporter | Sub::Exporter::
4 | 2 | 1 | 43µs | 43µs | groups_filename | Bio::Roary::AnalyseGroups::
8 | 1 | 1 | 43µs | 65µs | inline_deinitialize_slot | Class::MOP::Instance::
1 | 1 | 1 | 43µs | 43µs | CORE:readdir (opcode) | File::Path::
18 | 1 | 1 | 43µs | 43µs | __ANON__[Moose/Meta/Class.pm:28] | Moose::Meta::Class::
51 | 2 | 1 | 43µs | 43µs | _SCALAR0 (xsub) | Params::Util::
1 | 1 | 1 | 43µs | 116µs | _load_xs | Text::CSV::
3 | 1 | 1 | 43µs | 1.44ms | _make_exporter | Moose::Exporter::
5 | 3 | 3 | 42µs | 87µs | meta | Moose::Meta::Role::
2 | 1 | 1 | 42µs | 50µs | DESTROY | Bio::Roary::Output::EmblGroups::
18 | 1 | 1 | 42µs | 42µs | __ANON__[Class/MOP.pm:307] | Class::MOP::
4 | 1 | 1 | 42µs | 64µs | add_role_application | Moose::Meta::Class::
3 | 1 | 1 | 42µs | 42µs | _build_warn | Package::DeprecationManager::
13 | 1 | 1 | 42µs | 161µs | _attach_attribute | Moose::Meta::Role::
1 | 1 | 1 | 42µs | 164µs | _inflate_clusters_obj | Bio::Roary::PostAnalysis::
17 | 1 | 1 | 42µs | 42µs | _original_role | Moose::Meta::Role::Attribute::
2 | 1 | 1 | 42µs | 388µs | create | Class::MOP::Package::
21 | 2 | 2 | 41µs | 41µs | __ANON__[Class/MOP.pm:184] | Class::MOP::
1 | 1 | 1 | 41µs | 62µs | AUTOLOAD | Text::CSV::
2 | 1 | 1 | 41µs | 47µs | DESTROY | Bio::Roary::AnalyseGroups::
1 | 1 | 1 | 41µs | 75µs | fileparse_set_fstype | File::Basename::
22 | 2 | 2 | 41µs | 41µs | has_inline_generator | Moose::Meta::TypeConstraint::Parameterizable::
5 | 5 | 1 | 41µs | 41µs | mk_classdata | Class::Data::Inheritable::
21 | 2 | 2 | 40µs | 40µs | __ANON__[Class/MOP.pm:290] | Class::MOP::
1 | 1 | 1 | 40µs | 115µs | _build__inflate_clusters_obj | Bio::Roary::PostAnalysis::
21 | 2 | 2 | 40µs | 40µs | __ANON__[Class/MOP.pm:211] | Class::MOP::
2 | 1 | 1 | 40µs | 49µs | work | if::
31 | 1 | 1 | 40µs | 40µs | method_changed_in (xsub) | mro::
1 | 1 | 1 | 40µs | 87µs | _build__input_fh | Bio::Roary::GroupLabels::
2 | 2 | 2 | 40µs | 2.15ms | __ANON__[Module/Implementation.pm:44] | Module::Implementation::
1 | 1 | 1 | 39µs | 39µs | BEGIN@7 | Moose::
1 | 1 | 1 | 39µs | 4.15ms | BEGIN@11 | Bio::Roary::SplitGroups::
18 | 1 | 1 | 39µs | 39µs | __ANON__[Moose/Meta/Class.pm:34] | Moose::Meta::Class::
1 | 1 | 1 | 39µs | 4.17ms | BEGIN@19 | Bio::Roary::InflateClusters::
21 | 2 | 2 | 39µs | 39µs | __ANON__[Class/MOP.pm:243] | Class::MOP::
17 | 1 | 1 | 39µs | 39µs | original_options | Moose::Meta::Role::Attribute::
21 | 2 | 2 | 38µs | 38µs | __ANON__[Class/MOP.pm:270] | Class::MOP::
8 | 1 | 1 | 38µs | 212µs | _inline_clear_value | Class::MOP::Attribute::
1 | 1 | 1 | 38µs | 38µs | bootstrap (xsub) | Sub::Name::
3 | 1 | 1 | 38µs | 248µs | ret_summary | Carp::
3 | 1 | 1 | 38µs | 38µs | _new | Class::MOP::Package::
18 | 1 | 1 | 38µs | 38µs | _meta_method_class | Moose::Meta::Class::
6 | 6 | 2 | 38µs | 79µs | meta | Moose::Meta::Role::Composite::
6 | 6 | 1 | 38µs | 38µs | CORE:qr (opcode) | Module::Runtime::
1 | 1 | 1 | 37µs | 4.01ms | BEGIN@18 | Bio::Roary::GroupLabels::
17 | 1 | 1 | 37µs | 37µs | associated_role | Moose::Meta::Role::Attribute::
1 | 1 | 1 | 37µs | 94µs | _filtered_gff_files | Bio::Roary::AnnotateGroups::
31 | 1 | 1 | 37µs | 37µs | SvREADONLY (xsub) | Internals::
1 | 1 | 1 | 37µs | 37µs | BEGIN@7 | Devel::StackTrace::Frame::
1 | 1 | 1 | 37µs | 55µs | _build__filtered_gff_files | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 37µs | 220µs | _build__order_genes_obj | Bio::Roary::PostAnalysis::
3 | 1 | 1 | 37µs | 134µs | _follow_also | Moose::Exporter::
19 | 1 | 1 | 36µs | 36µs | define_optag (xsub) | Opcode::
3 | 3 | 3 | 36µs | 108µs | import | Moose::Exporter::
1 | 1 | 1 | 36µs | 57µs | BEGIN@6 | Carp::
3 | 1 | 1 | 36µs | 499µs | shortmess | Carp::
2 | 1 | 1 | 36µs | 2.83ms | create_parameterized_type_constraint | Moose::Util::TypeConstraints::
1 | 1 | 1 | 36µs | 36µs | BEGIN@116 | Module::Runtime::
3 | 3 | 2 | 36µs | 36µs | unimport | overloading::
1 | 1 | 1 | 36µs | 84µs | BEGIN@12 | Exception::Class::Base::
1 | 1 | 1 | 36µs | 400µs | import | Exception::Class::
18 | 3 | 1 | 36µs | 36µs | _cgc | Carp::
1 | 1 | 1 | 36µs | 2.75s | _analyse_groups_obj | Bio::Roary::SplitGroups::
30 | 1 | 1 | 36µs | 36µs | _inline_extra_init | Class::MOP::Class::
1 | 1 | 1 | 36µs | 131µs | import | Sub::Exporter::Progressive::
1 | 1 | 1 | 36µs | 36µs | bootstrap (xsub) | Cwd::
1 | 1 | 1 | 36µs | 178µs | BEGIN@18 | Class::MOP::Class::
1 | 1 | 1 | 36µs | 4.67ms | BEGIN@11 | Bio::Roary::PostAnalysis::
4 | 1 | 1 | 36µs | 168µs | apply_overloading | Moose::Meta::Role::Application::
1 | 1 | 1 | 35µs | 415µs | tempdir | File::Temp::
2 | 1 | 1 | 35µs | 35µs | CORE:match (opcode) | Eval::Closure::Sandbox_309::
4 | 1 | 1 | 35µs | 46µs | get_excluded_roles_list | Moose::Meta::Role::
4 | 1 | 1 | 35µs | 62.2ms | apply_all_roles | Moose::Util::
16 | 1 | 1 | 35µs | 35µs | options | Moose::Meta::Method::Destructor::
13 | 1 | 1 | 34µs | 34µs | CORE:sort (opcode) | Getopt::Long::
3 | 1 | 1 | 34µs | 57µs | _die_if_cycle_found_in_also_list_for_package | Moose::Exporter::
1 | 1 | 1 | 34µs | 2.99ms | BEGIN@12 | Bio::Roary::JobRunner::Role::
1 | 1 | 1 | 34µs | 255µs | _build__text_csv_obj | Bio::Roary::GroupStatistics::
2 | 1 | 1 | 34µs | 169µs | __ANON__[Class/MOP/Attribute.pm:478] | Class::MOP::Attribute::
1 | 1 | 1 | 34µs | 430µs | _build__output_fh | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 34µs | 34µs | __ANON__[(eval 604)[Eval/Closure.pm:125]:304] | Eval::Closure::Sandbox_434::
1 | 1 | 1 | 33µs | 4.18ms | BEGIN@17 | Bio::Roary::ContigsToGeneIDsFromGFF::
1 | 1 | 1 | 33µs | 62µs | BEGIN@542 | utf8::
4 | 1 | 1 | 33µs | 68µs | check_required_methods | Moose::Meta::Role::Application::ToClass::
6 | 1 | 1 | 33µs | 48µs | is_method_aliased | Moose::Meta::Role::Application::
1 | 1 | 1 | 33µs | 118µs | BEGIN@12 | Moose::Util::
1 | 1 | 1 | 33µs | 63µs | _tmpdir | File::Spec::Unix::
1 | 1 | 1 | 33µs | 64µs | _build__mcl_fh | Bio::Roary::InflateClusters::
2 | 1 | 1 | 33µs | 35µs | _copy_symbols | Module::Implementation::
1 | 1 | 1 | 33µs | 4.74ms | BEGIN@12 | Bio::Roary::CommandLine::Common::
1 | 1 | 1 | 32µs | 61µs | BEGIN@4 | Moose::Meta::Method::Augmented::
1 | 1 | 1 | 32µs | 313µs | BEGIN@6 | Sub::Identify::
8 | 1 | 1 | 32µs | 32µs | _tags_to_filter | Bio::Roary::GeneNamesFromGFF::
4 | 1 | 1 | 32µs | 20.7ms | use_module | Module::Runtime::
1 | 1 | 1 | 32µs | 53µs | __ANON__[Sub/Exporter/Progressive.pm:40] | Sub::Exporter::Progressive::
1 | 1 | 1 | 32µs | 32µs | BEGIN@2 | constant::
1 | 1 | 1 | 32µs | 3.12ms | BEGIN@10 | Bio::Roary::ParseGFFAnnotationRole::
1 | 1 | 1 | 32µs | 736µs | _build__split_groups_obj | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 32µs | 117µs | BEGIN@11 | Moose::Exporter::
1 | 1 | 1 | 32µs | 32µs | BEGIN@3 | Safe::
6 | 1 | 1 | 32µs | 39µs | _assert_collector_names_ok | Sub::Exporter::
1 | 1 | 1 | 32µs | 32µs | _ids_to_groups | Bio::Roary::AnnotateGroups::
6 | 1 | 1 | 32µs | 58µs | get_status | Carp::
1 | 1 | 1 | 32µs | 62µs | BEGIN@12 | Try::Tiny::
64 | 2 | 1 | 32µs | 32µs | CORE:sort (opcode) | B::Deparse::
1 | 1 | 1 | 32µs | 116µs | BEGIN@8 | Moose::Util::MetaRole::
1 | 1 | 1 | 31µs | 280µs | BEGIN@12 | Moose::Exporter::
4 | 4 | 2 | 31µs | 57µs | meta | Moose::Meta::TypeCoercion::
1 | 1 | 1 | 31µs | 31µs | BEGIN@3 | vars::
6 | 1 | 1 | 31µs | 31µs | CORE:ftsize (opcode) | DynaLoader::
21 | 5 | 4 | 31µs | 31µs | canonpath (xsub) | File::Spec::Unix::
12 | 1 | 1 | 31µs | 357µs | get_value | Class::MOP::Attribute::
3 | 1 | 1 | 31µs | 544µs | croak | Carp::
4 | 1 | 1 | 31µs | 148µs | new | Moose::Meta::Role::Application::
1 | 1 | 1 | 31µs | 49µs | BEGIN@4 | Moose::Meta::Method::Destructor::
1 | 1 | 1 | 30µs | 30µs | CORE:regcomp (opcode) | AutoLoader::
2 | 2 | 1 | 30µs | 30µs | _parse_args | File::Temp::
1 | 1 | 1 | 30µs | 35µs | DESTROY | Bio::Roary::OrderGenes::
12 | 2 | 1 | 30µs | 30µs | roles | Moose::Meta::Class::
1 | 1 | 1 | 30µs | 75µs | END | File::Temp::
1 | 1 | 1 | 30µs | 30µs | BEGIN@1 | Eval::Closure::
1 | 1 | 1 | 30µs | 62µs | BEGIN@483 | B::Deparse::
2 | 1 | 1 | 30µs | 1.40s | _connected_components | Graph::
1 | 1 | 1 | 30µs | 52µs | BEGIN@1 | Bio::Roary::ClustersRole::
6 | 2 | 1 | 30µs | 88µs | trusts | Carp::
1 | 1 | 1 | 30µs | 30µs | BEGIN@10 | File::Copy::
1 | 1 | 1 | 29µs | 56µs | BEGIN@4 | Class::MOP::Mixin::HasOverloads::
2 | 2 | 1 | 29µs | 119µs | _input_fh | Bio::Roary::GroupLabels::
4 | 1 | 1 | 29µs | 133µs | is_overloaded | Class::MOP::Mixin::HasOverloads::
4 | 3 | 3 | 29µs | 450µs | meta | Moose::Meta::Role::Method::Required::
1 | 1 | 1 | 29µs | 29µs | __ANON__[(eval 531)[Eval/Closure.pm:125]:432] | Eval::Closure::Sandbox_388::
1 | 1 | 1 | 29µs | 78µs | BEGIN@147 | Bio::Tools::GFF::
1 | 1 | 1 | 29µs | 109µs | BEGIN@9 | Moose::Meta::Role::Application::
16 | 1 | 1 | 29µs | 29µs | as | Moose::Util::TypeConstraints::
1 | 1 | 1 | 28µs | 42µs | new | Bio::Location::WidestCoordPolicy::
2 | 2 | 2 | 28µs | 28µs | exporter | Sub::Install::
3 | 3 | 2 | 28µs | 28µs | splitpath | File::Spec::Unix::
1 | 1 | 1 | 28µs | 57µs | BEGIN@5 | Class::Load::
1 | 1 | 1 | 28µs | 48µs | BEGIN@3 | Heap071::Fibonacci::
1 | 1 | 1 | 28µs | 59µs | BEGIN@6 | Module::Implementation::
1 | 1 | 1 | 28µs | 76µs | BEGIN@9 | Module::Implementation::
1 | 1 | 1 | 28µs | 47µs | get_all_symbols (xsub) | Package::Stash::XS::
12 | 2 | 1 | 28µs | 28µs | has_type_parameter | Moose::Meta::TypeConstraint::Parameterized::
1 | 1 | 1 | 28µs | 71µs | BEGIN@9 | Class::Load::XS::
4 | 1 | 1 | 28µs | 68µs | apply_override_method_modifiers | Moose::Meta::Role::Application::ToClass::
12 | 1 | 1 | 27µs | 27µs | is_slot_initialized | Class::MOP::Instance::
1 | 1 | 1 | 27µs | 27µs | import | File::Find::Rule::
1 | 1 | 1 | 27µs | 56µs | BEGIN@4 | Moose::Util::MetaRole::
45 | 4 | 1 | 27µs | 27µs | CORE:match (opcode) | Exporter::Heavy::
2 | 1 | 1 | 27µs | 83µs | _parse_parameterized_type_constraint | Moose::Util::TypeConstraints::
1 | 1 | 1 | 27µs | 27µs | BEGIN@217 | Sub::Exporter::
1 | 1 | 1 | 27µs | 1.83s | BUILD | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 27µs | 768µs | _split_groups_obj | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 27µs | 410µs | _build_group_graphs | Bio::Roary::OrderGenes::
1 | 1 | 1 | 27µs | 42µs | BEGIN@3 | Sub::Install::
80 | 2 | 1 | 27µs | 27µs | CORE:print (opcode) | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 27µs | 30µs | BEGIN@328 | Text::CSV_PP::
6 | 1 | 1 | 26µs | 26µs | trusts_directly | Carp::
3 | 1 | 1 | 26µs | 26µs | _make_import_sub | Moose::Exporter::
3 | 3 | 1 | 26µs | 26µs | input_files | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 26µs | 26µs | BEGIN@55 | Graph::
1 | 1 | 1 | 26µs | 26µs | BEGIN@3 | Opcode::
1 | 1 | 1 | 26µs | 55µs | BEGIN@4 | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 26µs | 26µs | BEGIN@42 | Sub::Name::
1 | 1 | 1 | 26µs | 27µs | O_LARGEFILE | Fcntl::
2 | 2 | 1 | 26µs | 26µs | _fetch_sub | Carp::
6 | 1 | 1 | 26µs | 26µs | CORE:ftfile (opcode) | DynaLoader::
1 | 1 | 1 | 26µs | 26µs | CORE:regcomp (opcode) | warnings::
1 | 1 | 1 | 26µs | 2.75s | _build__genes_to_files | Bio::Roary::SplitGroups::
3 | 3 | 1 | 26µs | 29µs | _do_with_warn | Sub::Install::
1 | 1 | 1 | 25µs | 44µs | BEGIN@3 | Sub::Exporter::Progressive::
3 | 1 | 1 | 25µs | 28µs | _generate_writer_method | Class::MOP::Method::Accessor::
1 | 1 | 1 | 25µs | 25µs | CORE:regcomp (opcode) | strict::
12 | 1 | 1 | 25µs | 25µs | get_slot_value | Class::MOP::Instance::
2 | 2 | 1 | 25µs | 25µs | fasta_files | Bio::Roary::SplitGroups::
4 | 2 | 1 | 25µs | 25µs | output_filename | Bio::Roary::Output::EmblGroups::
10 | 10 | 1 | 25µs | 25µs | CORE:qr (opcode) | Moose::Util::TypeConstraints::
1 | 1 | 1 | 25µs | 98µs | BEGIN@39 | Graph::
4 | 1 | 1 | 25µs | 34µs | get_required_method_list | Moose::Meta::Role::
1 | 1 | 1 | 25µs | 101µs | BEGIN@23 | Storable::
1 | 1 | 1 | 24µs | 24µs | BEGIN@20 | Devel::OverloadInfo::
1 | 1 | 1 | 24µs | 37µs | BEGIN@2 | overloading::
1 | 1 | 1 | 24µs | 52µs | BEGIN@4 | Class::MOP::Method::Constructor::
2 | 1 | 1 | 24µs | 2.69ms | _create_parameterized_type_constraint | Moose::Util::TypeConstraints::
1 | 1 | 1 | 24µs | 24µs | CORE:close (opcode) | Opcode::
16 | 1 | 1 | 24µs | 24µs | where | Moose::Util::TypeConstraints::
4 | 1 | 1 | 24µs | 101µs | Overloaded | overload::
1 | 1 | 1 | 24µs | 48µs | BEGIN@4 | Class::MOP::Class::Immutable::Trait::
1 | 1 | 1 | 24µs | 38µs | BEGIN@78 | Bio::Factory::SequenceStreamI::
1 | 1 | 1 | 24µs | 56µs | BEGIN@4 | Class::MOP::Attribute::
1 | 1 | 1 | 24µs | 54µs | BEGIN@3 | Graph::MSTHeapElem::
1 | 1 | 1 | 24µs | 24µs | BEGIN@3 | List::MoreUtils::
28 | 1 | 1 | 24µs | 24µs | CORE:match (opcode) | Moose::Exporter::
1 | 1 | 1 | 24µs | 86µs | BEGIN@7 | Moose::Util::
1 | 1 | 1 | 24µs | 43µs | BEGIN@91 | Array::Utils::
1 | 1 | 1 | 24µs | 42µs | BEGIN@4 | Class::MOP::
2 | 2 | 1 | 24µs | 24µs | gff_files | Bio::Roary::OrderGenes::
1 | 1 | 1 | 24µs | 24µs | BEGIN@81 | Symbol::
1 | 1 | 1 | 23µs | 23µs | BEGIN@3 | Carp::
1 | 1 | 1 | 23µs | 47µs | BEGIN@4 | Class::MOP::Deprecated::
1 | 1 | 1 | 23µs | 138µs | BEGIN@10 | File::Grep::
1 | 1 | 1 | 23µs | 122µs | BEGIN@8 | List::MoreUtils::
1 | 1 | 1 | 23µs | 23µs | BEGIN@111 | Text::CSV_PP::
1 | 1 | 1 | 23µs | 252µs | BEGIN@15 | File::Temp::
3 | 3 | 2 | 23µs | 43µs | meta | Moose::Meta::Role::Application::
1 | 1 | 1 | 23µs | 57µs | BEGIN@91 | Bio::SeqAnalysisParserI::
1 | 1 | 1 | 23µs | 43µs | BEGIN@4 | Class::MOP::MiniTrait::
1 | 1 | 1 | 23µs | 1.53ms | import | Getopt::Long::
11 | 7 | 1 | 23µs | 23µs | CORE:subst (opcode) | utf8::
1 | 1 | 1 | 23µs | 79µs | BEGIN@272 | Data::Dumper::
1 | 1 | 1 | 23µs | 23µs | BEGIN@2 | Safe::
1 | 1 | 1 | 23µs | 82µs | BEGIN@1088 | Text::CSV::ErrorDiag::
1 | 1 | 1 | 23µs | 154µs | BEGIN@6 | Graph::Traversal::DFS::
1 | 1 | 1 | 23µs | 73µs | BEGIN@8 | Moose::Meta::TypeConstraint::
8 | 1 | 1 | 22µs | 22µs | get_mro (xsub) | mro::
3 | 3 | 1 | 22µs | 22µs | CORE:subst (opcode) | AutoLoader::
1 | 1 | 1 | 22µs | 28µs | BEGIN@3 | MRO::Compat::
17 | 1 | 1 | 22µs | 22µs | inline_as | Moose::Util::TypeConstraints::
1 | 1 | 1 | 22µs | 29µs | BEGIN@139 | Sub::Install::
1 | 1 | 1 | 22µs | 60µs | BEGIN@555 | Carp::
1 | 1 | 1 | 22µs | 69µs | BEGIN@10 | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 22µs | 277µs | import | Error::
1 | 1 | 1 | 22µs | 47µs | BEGIN@3 | Graph::SPTHeapElem::
1 | 1 | 1 | 22µs | 36µs | BEGIN@287 | Sub::Install::
1 | 1 | 1 | 22µs | 22µs | BEGIN@15 | Getopt::Long::
10 | 1 | 1 | 22µs | 22µs | CORE:match (opcode) | Graph::Attribute::
1 | 1 | 1 | 22µs | 74µs | BEGIN@8 | Moose::Meta::Role::Application::RoleSummation::
1 | 1 | 1 | 22µs | 45µs | BEGIN@4 | Class::MOP::Method::Wrapped::
1 | 1 | 1 | 22µs | 61µs | BEGIN@147 | utf8::
1 | 1 | 1 | 22µs | 87µs | BEGIN@10 | Class::Load::
1 | 1 | 1 | 22µs | 22µs | CORE:fteexec (opcode) | Cwd::
1 | 1 | 1 | 22µs | 22µs | BEGIN@260 | IO::Handle::
1 | 1 | 1 | 22µs | 99µs | tmpdir | File::Spec::Unix::
2 | 1 | 1 | 22µs | 27µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:284] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 22µs | 22µs | __ANON__[(eval 391)[Eval/Closure.pm:125]:123] | Eval::Closure::Sandbox_265::
3 | 3 | 1 | 22µs | 22µs | groupfile | Bio::Roary::SplitGroups::
1 | 1 | 1 | 22µs | 49µs | BEGIN@2 | Bio::Root::Exception::
1 | 1 | 1 | 22µs | 54µs | BEGIN@9 | Config::
1 | 1 | 1 | 22µs | 59µs | BEGIN@83 | FindBin::
1 | 1 | 1 | 22µs | 27µs | DESTROY | Bio::Roary::GroupLabels::
1 | 1 | 1 | 22µs | 48µs | _build__sorted_file_names | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 22µs | 22µs | outfile | Bio::Roary::SplitGroups::
1 | 1 | 1 | 21µs | 37µs | BEGIN@123 | Bio::PrimarySeqI::
1 | 1 | 1 | 21µs | 316µs | BEGIN@24 | Data::Dumper::
2 | 1 | 1 | 21µs | 1.86ms | try {...} | Module::Implementation::
1 | 1 | 1 | 21µs | 92µs | BEGIN@9 | Moose::Meta::Class::
1 | 1 | 1 | 21µs | 43µs | BEGIN@8 | Moose::Meta::TypeConstraint::Class::
1 | 1 | 1 | 21µs | 44µs | BEGIN@4 | Moose::Util::
2 | 1 | 1 | 21µs | 21µs | CORE:match (opcode) | Eval::Closure::Sandbox_171::
1 | 1 | 1 | 21µs | 91µs | BEGIN@188 | Tie::Hash::
1 | 1 | 1 | 21µs | 21µs | __ANON__[(eval 355)[Eval/Closure.pm:125]:126] | Eval::Closure::Sandbox_238::
1 | 1 | 1 | 21µs | 34µs | BEGIN@1575 | File::Temp::Dir::
1 | 1 | 1 | 21µs | 68µs | BEGIN@8 | Moose::Meta::Attribute::
1 | 1 | 1 | 21µs | 34µs | BEGIN@15 | Package::Stash::
1 | 1 | 1 | 21µs | 59µs | BEGIN@4 | Moose::Meta::Object::Trait::
1 | 1 | 1 | 21µs | 48µs | BEGIN@6 | Graph::Matrix::
2 | 1 | 1 | 21µs | 255µs | remove_accessors | Moose::Meta::Attribute::
1 | 1 | 1 | 21µs | 44µs | BEGIN@4 | Class::MOP::Method::Accessor::
4 | 1 | 1 | 21µs | 84µs | apply_before_method_modifiers | Moose::Meta::Role::Application::
1 | 1 | 1 | 21µs | 48µs | BEGIN@14 | Devel::OverloadInfo::
1 | 1 | 1 | 21µs | 21µs | BEGIN@2 | File::Find::
1 | 1 | 1 | 21µs | 24µs | BEGIN@8 | File::Grep::
1 | 1 | 1 | 21µs | 35µs | BEGIN@11 | Sub::Exporter::
1 | 1 | 1 | 21µs | 46µs | BEGIN@93 | Bio::IdentifiableI::
1 | 1 | 1 | 21µs | 44µs | BEGIN@6 | Class::Load::XS::
1 | 1 | 1 | 21µs | 38µs | BEGIN@4 | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 20µs | 24µs | DESTROY | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 20µs | 20µs | bootstrap (xsub) | Clone::
1 | 1 | 1 | 20µs | 37µs | BEGIN@4 | Moose::Meta::Role::Method::Conflicting::
1 | 1 | 1 | 20µs | 40µs | BEGIN@12 | Sub::Exporter::
1 | 1 | 1 | 20µs | 46µs | BEGIN@2 | utf8::
16 | 16 | 1 | 20µs | 20µs | where | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 20µs | 40µs | BEGIN@4 | Moose::Meta::Class::Immutable::Trait::
1 | 1 | 1 | 20µs | 82µs | BEGIN@8 | Moose::Meta::Class::Immutable::Trait::
1 | 1 | 1 | 20µs | 38µs | BEGIN@3 | base::
1 | 1 | 1 | 20µs | 40µs | BEGIN@4 | metaclass::
3 | 1 | 1 | 20µs | 20µs | _build_import | Package::DeprecationManager::
5 | 1 | 1 | 20µs | 20µs | opnumber (xsub) | B::
2 | 2 | 1 | 20µs | 23µs | group_limit | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 20µs | 20µs | BEGIN@5 | Exception::Class::
1 | 1 | 1 | 20µs | 41µs | BEGIN@3 | Heap071::Elem::
3 | 3 | 2 | 20µs | 39µs | meta | Moose::Meta::Role::Application::ToClass::
2 | 2 | 2 | 20µs | 15.4ms | extends | Moose::
2 | 1 | 1 | 20µs | 20µs | _header_top | Bio::Roary::Output::EmblGroups::
1 | 1 | 1 | 20µs | 20µs | __ANON__[(eval 407)[Eval/Closure.pm:125]:192] | Eval::Closure::Sandbox_281::
1 | 1 | 1 | 20µs | 20µs | BEGIN@58 | Params::Util::
2 | 2 | 1 | 20µs | 20µs | output_multifasta_files | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 20µs | 39µs | BEGIN@3 | File::Spec::
3 | 1 | 1 | 20µs | 452µs | shortmess_heavy | Carp::
1 | 1 | 1 | 20µs | 20µs | CORE:chmod (opcode) | File::Temp::
1 | 1 | 1 | 20µs | 514µs | add_method_modifier | Moose::Util::
1 | 1 | 1 | 20µs | 61µs | BEGIN@9 | Scalar::Util::
1 | 1 | 1 | 20µs | 44µs | BEGIN@9 | List::Util::
2 | 2 | 2 | 20µs | 84µs | build_loader_sub | Module::Implementation::
1 | 1 | 1 | 20µs | 60µs | BEGIN@92 | Bio::Factory::FTLocationFactory::
1 | 1 | 1 | 20µs | 39µs | BEGIN@76 | Bio::Location::FuzzyLocationI::
1 | 1 | 1 | 20µs | 20µs | __ANON__[(eval 304)[Eval/Closure.pm:125]:98] | Eval::Closure::Sandbox_203::
1 | 1 | 1 | 20µs | 47µs | BEGIN@3 | Graph::Traversal::DFS::
1 | 1 | 1 | 20µs | 41µs | BEGIN@4 | Moose::Exporter::
1 | 1 | 1 | 20µs | 27µs | __ANON__[Sub/Exporter.pm:159] | Sub::Exporter::
1 | 1 | 1 | 20µs | 86µs | _mcl_fh | Bio::Roary::InflateClusters::
1 | 1 | 1 | 20µs | 44µs | BEGIN@8 | Class::MOP::Class::Immutable::Trait::
2 | 1 | 1 | 20µs | 21µs | remove_attribute | Class::MOP::Mixin::HasAttributes::
1 | 1 | 1 | 20µs | 62µs | BEGIN@10 | Moose::Meta::TypeConstraint::DuckType::
1 | 1 | 1 | 19µs | 334µs | _build__output_fh | Bio::Roary::GroupLabels::
1 | 1 | 1 | 19µs | 40µs | BEGIN@4 | Class::MOP::Module::
1 | 1 | 1 | 19µs | 58µs | BEGIN@11 | Class::MOP::Overload::
1 | 1 | 1 | 19µs | 39µs | BEGIN@4 | Moose::Deprecated::
1 | 1 | 1 | 19µs | 36µs | BEGIN@331 | Moose::Exporter::
1 | 1 | 1 | 19µs | 37µs | BEGIN@93 | Bio::Factory::FTLocationFactory::
1 | 1 | 1 | 19µs | 386µs | _build__output_fh | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 19µs | 65µs | BEGIN@7 | Moose::Meta::Role::Attribute::
1 | 1 | 1 | 19µs | 19µs | BEGIN@15 | Opcode::
2 | 1 | 1 | 19µs | 19µs | __ANON__[Graph/Attribute.pm:19] | Graph::Attribute::
1 | 1 | 1 | 19µs | 48µs | BEGIN@135 | Moose::Exporter::
6 | 2 | 1 | 19µs | 19µs | _also_list_for_package | Moose::Exporter::
1 | 1 | 1 | 19µs | 33µs | BEGIN@8 | Errno::
1 | 1 | 1 | 19µs | 37µs | BEGIN@9 | Moose::Role::
1 | 1 | 1 | 19µs | 38µs | BEGIN@6 | Package::DeprecationManager::
1 | 1 | 1 | 19µs | 37µs | BEGIN@4 | Class::MOP::Method::Inlined::
1 | 1 | 1 | 19µs | 62µs | BEGIN@9 | Moose::Meta::Role::Application::ToInstance::
1 | 1 | 1 | 19µs | 60µs | BEGIN@38 | SelectSaver::
1 | 1 | 1 | 19µs | 392µs | _build__output_fh | Bio::Roary::InflateClusters::
1 | 1 | 1 | 19µs | 19µs | CORE:ftdir (opcode) | File::Temp::Dir::
2 | 2 | 1 | 19µs | 19µs | output_filename | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 18µs | 18µs | BEGIN@3 | Graph::Undirected::
1 | 1 | 1 | 18µs | 83µs | BEGIN@9 | Moose::Exporter::
1 | 1 | 1 | 18µs | 33µs | BEGIN@2 | Bio::Root::Root::
1 | 1 | 1 | 18µs | 40µs | BEGIN@143 | Bio::SeqFeature::Generic::
1 | 1 | 1 | 18µs | 38µs | BEGIN@5 | Eval::Closure::
1 | 1 | 1 | 18µs | 65µs | BEGIN@32 | File::Temp::
1 | 1 | 1 | 18µs | 67µs | BEGIN@11 | B::Deparse::
1 | 1 | 1 | 18µs | 18µs | verbose_stats | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 18µs | 37µs | BEGIN@4 | Class::MOP::Method::Generated::
1 | 1 | 1 | 18µs | 40µs | BEGIN@3 | Graph::
1 | 1 | 1 | 18µs | 37µs | BEGIN@189 | Bio::SeqUtils::
1 | 1 | 1 | 18µs | 72µs | BEGIN@11 | Class::MOP::Attribute::
1 | 1 | 1 | 18µs | 128µs | BEGIN@8 | Graph::AdjacencyMatrix::
1 | 1 | 1 | 18µs | 18µs | accessory_tab_output_filename | Bio::Roary::PostAnalysis::
3 | 1 | 1 | 18µs | 18µs | _make_unimport_sub | Moose::Exporter::
1 | 1 | 1 | 18µs | 36µs | BEGIN@4 | Class::MOP::Package::
1 | 1 | 1 | 18µs | 32µs | BEGIN@100 | Data::OptList::
1 | 1 | 1 | 18µs | 18µs | BEGIN@9 | File::Temp::
1 | 1 | 1 | 18µs | 327µs | BEGIN@9 | Moose::Meta::Method::Overridden::
1 | 1 | 1 | 18µs | 18µs | BEGIN@10 | Package::Stash::
1 | 1 | 1 | 18µs | 25µs | BEGIN@5 | Class::MOP::Method::Accessor::
3 | 1 | 1 | 18µs | 23µs | _follow_also_real | Moose::Exporter::
1 | 1 | 1 | 18µs | 36µs | BEGIN@4 | Moose::Meta::Method::Constructor::
1 | 1 | 1 | 18µs | 86µs | BEGIN@13 | Class::MOP::Attribute::
1 | 1 | 1 | 18µs | 66µs | BEGIN@10 | Moose::Meta::TypeConstraint::Union::
1 | 1 | 1 | 18µs | 23µs | core_definition | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 18µs | 18µs | output_raw_filename_unique_genes | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 18µs | 18µs | output_multifasta_files | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 18µs | 53µs | BEGIN@10 | Class::MOP::Mixin::HasOverloads::
1 | 1 | 1 | 18µs | 39µs | BEGIN@4 | Moose::Meta::Role::Composite::
4 | 1 | 1 | 18µs | 32µs | find_meta | Moose::Util::
1 | 1 | 1 | 18µs | 38µs | BEGIN@82 | Bio::Location::Fuzzy::
1 | 1 | 1 | 18µs | 70µs | BEGIN@10 | Class::MOP::Attribute::
1 | 1 | 1 | 18µs | 106µs | BEGIN@6 | Sub::Install::
1 | 1 | 1 | 17µs | 37µs | BEGIN@4 | Class::MOP::Overload::
1 | 1 | 1 | 17µs | 38µs | BEGIN@12.1 | File::Copy::
1 | 1 | 1 | 17µs | 60µs | BEGIN@80 | FindBin::
3 | 1 | 1 | 17µs | 17µs | uniq (xsub) | List::MoreUtils::
1 | 1 | 1 | 17µs | 17µs | BEGIN@6 | Try::Tiny::
1 | 1 | 1 | 17µs | 46µs | BEGIN@148 | Bio::Tools::GFF::
1 | 1 | 1 | 17µs | 17µs | CORE:subst (opcode) | File::Temp::
1 | 1 | 1 | 17µs | 524µs | BEGIN@6 | Moose::Meta::Role::
1 | 1 | 1 | 17µs | 142µs | BEGIN@11 | Package::DeprecationManager::
1 | 1 | 1 | 17µs | 568µs | __ANON__[lib/Bio/Roary/SplitGroups.pm:38] | Bio::Roary::SplitGroups::
1 | 1 | 1 | 17µs | 32µs | BEGIN@3 | Bio::Root::IO::
1 | 1 | 1 | 17µs | 95µs | BEGIN@50 | Class::MOP::Mixin::HasOverloads::
1 | 1 | 1 | 17µs | 35µs | BEGIN@2 | MRO::Compat::
7 | 1 | 1 | 17µs | 17µs | get_method_exclusions | Moose::Meta::Role::Application::
1 | 1 | 1 | 17µs | 35µs | BEGIN@67 | Bio::DescribableI::
2 | 1 | 1 | 17µs | 19µs | _instantiate_module | Class::MOP::Module::
1 | 1 | 1 | 17µs | 36µs | BEGIN@4 | Moose::Meta::Role::Application::
1 | 1 | 1 | 17µs | 34µs | BEGIN@7 | Graph::AdjacencyMap::Heavy::
1 | 1 | 1 | 17µs | 28µs | BEGIN@7 | Module::Implementation::
1 | 1 | 1 | 17µs | 21µs | cpus | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 17µs | 20µs | translation_table | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 17µs | 17µs | BEGIN@3 | File::Path::
1 | 1 | 1 | 17µs | 17µs | CORE:open_dir (opcode) | File::Path::
1 | 1 | 1 | 17µs | 17µs | BEGIN@97 | IO::Seekable::
16 | 16 | 1 | 17µs | 17µs | subtype | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 17µs | 32µs | BEGIN@3 | Clone::
1 | 1 | 1 | 17µs | 38µs | BEGIN@22 | Devel::OverloadInfo::
1 | 1 | 1 | 17µs | 39µs | BEGIN@725 | Moose::Exporter::
1 | 1 | 1 | 17µs | 36µs | BEGIN@4 | Moose::Meta::Instance::
1 | 1 | 1 | 17µs | 63µs | BEGIN@11 | Moose::Util::
1 | 1 | 1 | 17µs | 39µs | BEGIN@5 | File::Grep::
3 | 3 | 1 | 17µs | 17µs | __ANON__[Sub/Install.pm:176] | Sub::Install::
17 | 17 | 1 | 17µs | 17µs | inline_as | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 17µs | 36µs | BEGIN@691 | B::Deparse::
1 | 1 | 1 | 17µs | 17µs | __ANON__[(eval 530)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_387::
1 | 1 | 1 | 16µs | 28µs | BEGIN@77 | Bio::Location::Atomic::
4 | 4 | 1 | 16µs | 16µs | CORE:match (opcode) | Eval::Closure::Sandbox_434::
3 | 1 | 1 | 16µs | 16µs | _parse_trait_aliases | Moose::Exporter::
1 | 1 | 1 | 16µs | 43µs | BEGIN@1863 | B::Deparse::
1 | 1 | 1 | 16µs | 35µs | BEGIN@3 | Devel::GlobalDestruction::
1 | 1 | 1 | 16µs | 34µs | BEGIN@4 | Moose::Meta::Role::Application::RoleSummation::
1 | 1 | 1 | 16µs | 178µs | BEGIN@7 | Moose::Meta::Role::Method::Conflicting::
1 | 1 | 1 | 16µs | 25µs | BEGIN@45 | Sub::Name::
1 | 1 | 1 | 16µs | 16µs | BEGIN@1259 | B::Deparse::
1 | 1 | 1 | 16µs | 28µs | BEGIN@64 | Bio::DB::RandomAccessI::
1 | 1 | 1 | 16µs | 22µs | BEGIN@5 | Moose::Meta::Method::Destructor::
2 | 2 | 2 | 16µs | 30µs | meta | Moose::Meta::Role::Application::RoleSummation::
1 | 1 | 1 | 16µs | 28µs | BEGIN@5 | Moose::Util::MetaRole::
1 | 1 | 1 | 16µs | 29µs | BEGIN@9 | Moose::Util::MetaRole::
1 | 1 | 1 | 16µs | 186µs | BEGIN@53 | Storable::
1 | 1 | 1 | 16µs | 34µs | BEGIN@13 | Sub::Exporter::
2 | 2 | 2 | 16µs | 1.06ms | before | Moose::
1 | 1 | 1 | 16µs | 58µs | BEGIN@18 | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 16µs | 4.10ms | BEGIN@7 | Class::MOP::Module::
1 | 1 | 1 | 16µs | 22µs | BEGIN@5 | Class::MOP::Overload::
1 | 1 | 1 | 16µs | 16µs | __ANON__[(eval 172)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_147::
8 | 1 | 1 | 16µs | 16µs | has_constraint_generator | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 16µs | 3.03ms | BEGIN@16 | Moose::Object::
16 | 16 | 1 | 16µs | 16µs | as | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 16µs | 20µs | DESTROY | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 16µs | 71µs | BEGIN@19 | Bio::Roary::Output::GroupsMultifastaNucleotide::
1 | 1 | 1 | 16µs | 35µs | BEGIN@568 | Carp::
1 | 1 | 1 | 16µs | 16µs | BEGIN@20 | Class::MOP::
1 | 1 | 1 | 16µs | 16µs | _push_tags | Exporter::Heavy::
1 | 1 | 1 | 16µs | 61µs | BEGIN@13 | Moose::Exporter::
1 | 1 | 1 | 16µs | 16µs | CORE:match (opcode) | AutoLoader::
1 | 1 | 1 | 16µs | 28µs | BEGIN@95 | Bio::Factory::ObjectBuilderI::
1 | 1 | 1 | 16µs | 16µs | BEGIN@7 | Class::MOP::
1 | 1 | 1 | 16µs | 62µs | BEGIN@40 | Graph::
1 | 1 | 1 | 16µs | 16µs | BEGIN@289 | Module::Runtime::
1 | 1 | 1 | 16µs | 29µs | BEGIN@4 | Moose::Meta::Class::
1 | 1 | 1 | 16µs | 16µs | BEGIN@2248 | B::Deparse::
1 | 1 | 1 | 16µs | 73µs | BEGIN@9 | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 16µs | 16µs | __ANON__[(eval 495)[Eval/Closure.pm:125]:193] | Eval::Closure::Sandbox_352::
2 | 1 | 1 | 16µs | 16µs | __ANON__[Graph.pm:2741] | Graph::
1 | 1 | 1 | 16µs | 59µs | BEGIN@9 | Moose::Meta::Role::Method::Conflicting::
1 | 1 | 1 | 16µs | 330µs | new | Moose::Meta::TypeConstraint::Registry::
1 | 1 | 1 | 16µs | 251µs | BEGIN@10 | Moose::Util::
1 | 1 | 1 | 16µs | 33µs | BEGIN@2 | POSIX::
1 | 1 | 1 | 16µs | 16µs | BEGIN@2279 | B::Deparse::
1 | 1 | 1 | 16µs | 28µs | BEGIN@84 | Bio::Location::CoordinatePolicyI::
1 | 1 | 1 | 16µs | 32µs | BEGIN@80 | Bio::Seq::SeqFactory::
1 | 1 | 1 | 16µs | 37µs | BEGIN@4 | Class::MOP::Class::
1 | 1 | 1 | 16µs | 16µs | BEGIN@18 | DynaLoader::
1 | 1 | 1 | 16µs | 16µs | __ANON__[(eval 580)[Eval/Closure.pm:125]:192] | Eval::Closure::Sandbox_410::
6 | 1 | 1 | 16µs | 16µs | inline_generator | Moose::Meta::TypeConstraint::Parameterizable::
2 | 1 | 1 | 16µs | 16µs | bits | re::
1 | 1 | 1 | 16µs | 32µs | BEGIN@128 | Bio::PrimarySeq::
1 | 1 | 1 | 16µs | 175µs | BEGIN@325 | Bio::Roary::AnnotateGroups::
2 | 1 | 1 | 16µs | 28µs | remove_package_symbol | Class::MOP::Package::
1 | 1 | 1 | 16µs | 16µs | BEGIN@5 | Devel::StackTrace::
3 | 3 | 2 | 16µs | 16µs | splitdir | File::Spec::Unix::
5 | 1 | 1 | 16µs | 16µs | method_metaclass | Moose::Meta::Role::
1 | 1 | 1 | 16µs | 34µs | BEGIN@4 | Moose::Meta::TypeCoercion::
1 | 1 | 1 | 16µs | 63µs | BEGIN@6 | Moose::Util::MetaRole::
1 | 1 | 1 | 15µs | 27µs | BEGIN@85 | Bio::Location::Simple::
1 | 1 | 1 | 15µs | 72µs | BEGIN@8 | Class::MOP::Method::Accessor::
1 | 1 | 1 | 15µs | 15µs | __ANON__[(eval 192)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_161::
3 | 2 | 2 | 15µs | 15µs | curdir | File::Spec::Unix::
1 | 1 | 1 | 15µs | 36µs | BEGIN@3 | Graph::Attribute::
6 | 1 | 1 | 15µs | 15µs | get_method_aliases | Moose::Meta::Role::Application::
9 | 3 | 1 | 15µs | 15µs | __ANON__[Moose/Meta/Role.pm:305] | Moose::Meta::Role::
1 | 1 | 1 | 15µs | 23µs | BEGIN@12 | Package::DeprecationManager::
1 | 1 | 1 | 15µs | 210µs | BEGIN@35 | Package::Stash::
1 | 1 | 1 | 15µs | 15µs | (bool (xsub) | version::
8 | 1 | 1 | 15µs | 15µs | CORE:subst (opcode) | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 15µs | 15µs | BEGIN@16 | Error::
1 | 1 | 1 | 15µs | 34µs | BEGIN@3 | Exporter::Heavy::
1 | 1 | 1 | 15µs | 29µs | BEGIN@76 | Bio::Annotation::SimpleValue::
1 | 1 | 1 | 15µs | 212µs | BEGIN@185 | Bio::Tools::CodonTable::
1 | 1 | 1 | 15µs | 30µs | BEGIN@4 | Moose::Meta::Role::
1 | 1 | 1 | 15µs | 65µs | BEGIN@14 | Moose::Util::
1 | 1 | 1 | 15µs | 40µs | BEGIN@28 | Safe::
1 | 1 | 1 | 15µs | 36µs | BEGIN@153 | utf8::
1 | 1 | 1 | 15µs | 28µs | BEGIN@80 | Bio::Annotation::TypeManager::
1 | 1 | 1 | 15µs | 28µs | BEGIN@103 | Bio::LocatableSeq::
1 | 1 | 1 | 15µs | 31µs | BEGIN@4 | Moose::Meta::Role::Application::ToRole::
2 | 2 | 1 | 15µs | 29µs | meta | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 15µs | 34µs | BEGIN@132 | Bio::AnnotationCollectionI::
1 | 1 | 1 | 15µs | 15µs | CORE:open (opcode) | Bio::Roary::ClustersRole::
1 | 1 | 1 | 15µs | 15µs | dont_create_rplots | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 15µs | 15µs | __ANON__[(eval 440)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_297::
1 | 1 | 1 | 15µs | 273µs | BEGIN@15 | Moose::Exporter::
1 | 1 | 1 | 15µs | 30µs | BEGIN@4 | Moose::Meta::Role::Application::ToClass::
1 | 1 | 1 | 15µs | 33µs | BEGIN@4 | Moose::Object::
1 | 1 | 1 | 15µs | 23µs | BEGIN@8 | Moose::Util::
1 | 1 | 1 | 15µs | 198µs | BEGIN@4 | constant::
1 | 1 | 1 | 15µs | 39µs | BEGIN@654 | utf8::
1 | 1 | 1 | 15µs | 15µs | BEGIN@4 | AutoLoader::
1 | 1 | 1 | 15µs | 32µs | meta | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 15µs | 26µs | BEGIN@3 | Class::Data::Inheritable::
1 | 1 | 1 | 15µs | 117µs | BEGIN@9 | Class::MOP::Attribute::
1 | 1 | 1 | 15µs | 62µs | BEGIN@9 | Class::MOP::Method::Generated::
1 | 1 | 1 | 15µs | 15µs | CORE:match (opcode) | Eval::Closure::Sandbox_306::
1 | 1 | 1 | 15µs | 33µs | BEGIN@4 | File::Find::Rule::
1 | 1 | 1 | 15µs | 37µs | BEGIN@136 | Moose::Exporter::
4 | 1 | 1 | 15µs | 62µs | apply_after_method_modifiers | Moose::Meta::Role::Application::
2 | 2 | 1 | 15µs | 30µs | meta | Moose::Meta::TypeConstraint::Parameterized::
1 | 1 | 1 | 15µs | 123µs | BEGIN@7 | Graph::MSTHeapElem::
1 | 1 | 1 | 15µs | 30µs | BEGIN@4 | Moose::Meta::TypeConstraint::Parameterized::
1 | 1 | 1 | 15µs | 72µs | BEGIN@11 | Opcode::
1 | 1 | 1 | 15µs | 15µs | BEGIN@2 | Package::Stash::
1 | 1 | 1 | 15µs | 15µs | CORE:pack (opcode) | Safe::
1 | 1 | 1 | 15µs | 44µs | BEGIN@184 | Sub::Install::
1 | 1 | 1 | 15µs | 28µs | BEGIN@86 | Bio::Factory::SequenceFactoryI::
1 | 1 | 1 | 15µs | 196µs | BEGIN@148 | Bio::Roary::Output::GroupsMultifastaNucleotide::
1 | 1 | 1 | 15µs | 2.14ms | BEGIN@12 | Class::MOP::Method::Meta::
1 | 1 | 1 | 15µs | 26µs | BEGIN@10 | Class::MOP::Package::
1 | 1 | 1 | 15µs | 85µs | BEGIN@4 | Graph::MSTHeapElem::
1 | 1 | 1 | 15µs | 32µs | BEGIN@4 | Moose::Meta::Mixin::AttributeCore::
1 | 1 | 1 | 15µs | 32µs | BEGIN@4 | Moose::Meta::TypeConstraint::Class::
1 | 1 | 1 | 15µs | 84µs | BEGIN@15 | Try::Tiny::
1 | 1 | 1 | 15µs | 78µs | BEGIN@6 | constant::
1 | 1 | 1 | 15µs | 31µs | BEGIN@2 | Bio::Root::RootI::
1 | 1 | 1 | 15µs | 31µs | BEGIN@327 | Bio::SeqIO::
1 | 1 | 1 | 15µs | 29µs | BEGIN@168 | Bio::Tools::IUPAC::
1 | 1 | 1 | 15µs | 29µs | BEGIN@58 | Fcntl::
1 | 1 | 1 | 15µs | 31µs | BEGIN@628 | IO::Handle::
1 | 1 | 1 | 14µs | 54µs | BEGIN@20 | Bio::Roary::Output::GroupsMultifastasNucleotide::
1 | 1 | 1 | 14µs | 14µs | accessory_ordering_key | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 14µs | 45µs | BEGIN@97 | Bio::SeqFeatureI::
1 | 1 | 1 | 14µs | 23µs | BEGIN@10 | Config::
1 | 1 | 1 | 14µs | 41µs | BEGIN@11 | File::Copy::
1 | 1 | 1 | 14µs | 35µs | BEGIN@12 | File::Copy::
1 | 1 | 1 | 14µs | 24µs | BEGIN@9 | Package::Stash::
2 | 2 | 1 | 14µs | 14µs | CORE:regcomp (opcode) | DynaLoader::
1 | 1 | 1 | 14µs | 488µs | add_before_method_modifier | Class::MOP::Class::
1 | 1 | 1 | 14µs | 14µs | __ANON__[(eval 93)[Eval/Closure.pm:125]:100] | Eval::Closure::Sandbox_68::
1 | 1 | 1 | 14µs | 14µs | CORE:match (opcode) | File::Path::
1 | 1 | 1 | 14µs | 64µs | BEGIN@14 | File::Temp::
1 | 1 | 1 | 14µs | 96µs | BEGIN@4 | Graph::SPTHeapElem::
1 | 1 | 1 | 14µs | 30µs | BEGIN@3 | Graph::Traversal::
4 | 1 | 1 | 14µs | 14µs | application_to_class_class | Moose::Meta::Role::
1 | 1 | 1 | 14µs | 28µs | BEGIN@4 | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 14µs | 29µs | BEGIN@4 | Moose::Meta::TypeConstraint::Registry::
1 | 1 | 1 | 14µs | 14µs | CORE:subst (opcode) | Text::CSV::
1 | 1 | 1 | 14µs | 166µs | BEGIN@189 | Tie::Hash::
1 | 1 | 1 | 14µs | 25µs | BEGIN@5 | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 14µs | 32µs | BEGIN@4 | Text::CSV::
1 | 1 | 1 | 14µs | 31µs | BEGIN@4 | re::
1 | 1 | 1 | 14µs | 30µs | BEGIN@89 | Bio::Range::
1 | 1 | 1 | 14µs | 51µs | BEGIN@20 | Bio::Roary::Output::GroupsMultifastaNucleotide::
1 | 1 | 1 | 14µs | 65µs | BEGIN@8 | Class::MOP::Method::Constructor::
1 | 1 | 1 | 14µs | 40µs | BEGIN@7 | Class::MOP::MiniTrait::
3 | 1 | 1 | 14µs | 2.13ms | role_type | Moose::Util::TypeConstraints::
1 | 1 | 1 | 14µs | 24µs | BEGIN@116 | overload::
1 | 1 | 1 | 14µs | 28µs | BEGIN@88 | Bio::Annotation::Collection::
1 | 1 | 1 | 14µs | 140µs | BEGIN@352 | Bio::Roary::OrderGenes::
1 | 1 | 1 | 14µs | 34µs | BEGIN@23 | Devel::GlobalDestruction::
1 | 1 | 1 | 14µs | 124µs | BEGIN@7 | Graph::SPTHeapElem::
2 | 2 | 1 | 14µs | 27µs | meta | Moose::Meta::TypeConstraint::Registry::
1 | 1 | 1 | 14µs | 53µs | BEGIN@7 | metaclass::
1 | 1 | 1 | 14µs | 24µs | BEGIN@3 | utf8::
2 | 2 | 1 | 14µs | 14µs | CORE:chdir (opcode) | File::Path::
2 | 2 | 2 | 14µs | 30µs | import | re::
1 | 1 | 1 | 14µs | 38µs | BEGIN@80 | Bio::Location::SplitLocationI::
2 | 1 | 1 | 14µs | 28µs | _builder__number_of_isolates | Bio::Roary::AnalyseGroups::
1 | 1 | 1 | 14µs | 40µs | meta | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 14µs | 20µs | DESTROY | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 14µs | 27µs | BEGIN@128 | Bio::Seq::SeqBuilder::
1 | 1 | 1 | 14µs | 25µs | BEGIN@6 | Class::Load::
2 | 2 | 2 | 14µs | 17µs | file_name_is_absolute | File::Spec::Unix::
1 | 1 | 1 | 14µs | 40µs | BEGIN@5 | Graph::SPTHeapElem::
1 | 1 | 1 | 14µs | 37µs | BEGIN@188 | Safe::
1 | 1 | 1 | 14µs | 64µs | BEGIN@29 | Safe::
1 | 1 | 1 | 14µs | 15µs | DESTROY | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 14µs | 14µs | new | Bio::Root::Root::
1 | 1 | 1 | 14µs | 7.05ms | BEGIN@10 | Class::MOP::Method::Accessor::
1 | 1 | 1 | 14µs | 24µs | BEGIN@5 | Class::MOP::Method::Constructor::
1 | 1 | 1 | 14µs | 27µs | BEGIN@4 | Class::MOP::Mixin::AttributeCore::
1 | 1 | 1 | 14µs | 14µs | __ANON__[(eval 312)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_211::
2 | 2 | 1 | 14µs | 27µs | meta | Moose::Meta::TypeConstraint::Enum::
1 | 1 | 1 | 14µs | 37µs | BEGIN@8 | Package::Stash::
1 | 1 | 1 | 14µs | 14µs | BEGIN@2 | Package::Stash::XS::
1 | 1 | 1 | 14µs | 40µs | BEGIN@36 | Safe::
2 | 2 | 1 | 14µs | 14µs | _output_inflate_clusters_filename | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 14µs | 28µs | BEGIN@79 | Bio::DB::SeqI::
1 | 1 | 1 | 14µs | 63µs | BEGIN@191 | Bio::SeqUtils::
1 | 1 | 1 | 14µs | 5.01ms | BEGIN@20 | Class::MOP::Class::
1 | 1 | 1 | 14µs | 77µs | BEGIN@9 | Class::MOP::Overload::
1 | 1 | 1 | 14µs | 28µs | BEGIN@4 | Moose::Meta::TypeConstraint::DuckType::
1 | 1 | 1 | 14µs | 54µs | BEGIN@9 | Moose::Util::
1 | 1 | 1 | 14µs | 24µs | _check_sanity | Text::CSV_PP::
3 | 3 | 1 | 14µs | 14µs | CORE:qr (opcode) | Sub::Install::
1 | 1 | 1 | 14µs | 64µs | BEGIN@7 | Class::MOP::Method::Wrapped::
1 | 1 | 1 | 14µs | 26µs | BEGIN@4 | Class::MOP::Mixin::HasAttributes::
1 | 1 | 1 | 14µs | 14µs | BEGIN@18 | Data::Dumper::
1 | 1 | 1 | 14µs | 27µs | BEGIN@3 | File::Spec::Unix::
1 | 1 | 1 | 14µs | 14µs | CORE:regcomp (opcode) | File::Temp::
1 | 1 | 1 | 14µs | 29µs | BEGIN@261 | IO::Handle::
1 | 1 | 1 | 14µs | 62µs | BEGIN@9 | Moose::Meta::Method::Destructor::
1 | 1 | 1 | 14µs | 74µs | BEGIN@8 | Moose::Role::
1 | 1 | 1 | 14µs | 30µs | BEGIN@204 | POSIX::
1 | 1 | 1 | 14µs | 139µs | BEGIN@146 | overload::
1 | 1 | 1 | 14µs | 32µs | _build__clusters_fh | Bio::Roary::ClustersRole::
1 | 1 | 1 | 14µs | 48µs | _clusters_fh | Bio::Roary::InflateClusters::
1 | 1 | 1 | 14µs | 30µs | BEGIN@1 | Class::Load::
1 | 1 | 1 | 14µs | 60µs | BEGIN@16 | Class::Load::
1 | 1 | 1 | 14µs | 22µs | BEGIN@7 | Class::Load::XS::
1 | 1 | 1 | 14µs | 44µs | BEGIN@16 | Class::MOP::Class::
1 | 1 | 1 | 14µs | 20µs | BEGIN@5 | Class::MOP::Method::Wrapped::
1 | 1 | 1 | 14µs | 32µs | BEGIN@45 | Config::
1 | 1 | 1 | 14µs | 35µs | BEGIN@5 | Graph::Undirected::
1 | 1 | 1 | 14µs | 36µs | BEGIN@114 | Module::Implementation::
1 | 1 | 1 | 14µs | 39µs | BEGIN@1087 | Text::CSV::ErrorDiag::
1 | 1 | 1 | 14µs | 37µs | BEGIN@8 | vars::
1 | 1 | 1 | 14µs | 24µs | BEGIN@5 | Class::MOP::Deprecated::
1 | 1 | 1 | 14µs | 27µs | BEGIN@4 | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 14µs | 26µs | BEGIN@1 | Moose::
1 | 1 | 1 | 14µs | 24µs | BEGIN@5 | Moose::Meta::Instance::
1 | 1 | 1 | 14µs | 24µs | BEGIN@5 | Moose::Meta::Method::Augmented::
1 | 1 | 1 | 14µs | 59µs | BEGIN@7 | Moose::Meta::Method::Augmented::
1 | 1 | 1 | 14µs | 28µs | BEGIN@4 | Moose::Meta::Role::Application::ToInstance::
2 | 2 | 2 | 14µs | 25µs | meta | Moose::Meta::Role::Application::ToInstance::
1 | 1 | 1 | 14µs | 35µs | BEGIN@29 | constant::
1 | 1 | 1 | 13µs | 24µs | BEGIN@5 | Class::MOP::Attribute::
1 | 1 | 1 | 13µs | 58µs | BEGIN@17 | Class::MOP::Class::
1 | 1 | 1 | 13µs | 51µs | BEGIN@11 | Class::MOP::Mixin::HasOverloads::
1 | 1 | 1 | 13µs | 20µs | BEGIN@6 | Eval::Closure::
1 | 1 | 1 | 13µs | 25µs | BEGIN@3 | Exception::Class::Base::
1 | 1 | 1 | 13µs | 49µs | BEGIN@44 | File::Temp::
1 | 1 | 1 | 13µs | 56µs | BEGIN@1733 | Graph::
1 | 1 | 1 | 13µs | 32µs | BEGIN@113 | Module::Implementation::
1 | 1 | 1 | 13µs | 26µs | BEGIN@4 | Moose::Meta::Method::Accessor::
1 | 1 | 1 | 13µs | 28µs | BEGIN@4 | Moose::Meta::Method::Meta::
1 | 1 | 1 | 13µs | 18µs | BEGIN@5 | Moose::Meta::TypeConstraint::Enum::
1 | 1 | 1 | 13µs | 26µs | BEGIN@4 | Moose::Meta::TypeConstraint::Union::
1 | 1 | 1 | 13µs | 26µs | BEGIN@3 | AutoLoader::
1 | 1 | 1 | 13µs | 40µs | BEGIN@131 | Carp::
2 | 1 | 1 | 13µs | 18µs | inline_weaken_slot_value | Class::MOP::Instance::
1 | 1 | 1 | 13µs | 62µs | BEGIN@7 | Class::MOP::Method::Accessor::
1 | 1 | 1 | 13µs | 68µs | BEGIN@7 | Class::MOP::Method::Constructor::
1 | 1 | 1 | 13µs | 53µs | BEGIN@1544 | Getopt::Long::CallBack::
1 | 1 | 1 | 13µs | 119µs | BEGIN@4 | Graph::Undirected::
1 | 1 | 1 | 13µs | 36µs | BEGIN@11 | Moose::Meta::Class::
1 | 1 | 1 | 13µs | 26µs | BEGIN@4 | Moose::Meta::Role::Method::
1 | 1 | 1 | 13µs | 28µs | BEGIN@4 | Moose::Meta::TypeConstraint::Role::
1 | 1 | 1 | 13µs | 21µs | BEGIN@5 | Moose::Util::
1 | 1 | 1 | 13µs | 26µs | BEGIN@2 | parent::
1 | 1 | 1 | 13µs | 20µs | meta | Bio::Roary::AnalyseGroups::
1 | 1 | 1 | 13µs | 50µs | BEGIN@13 | Class::MOP::Class::
1 | 1 | 1 | 13µs | 28µs | BEGIN@14 | Error::
1 | 1 | 1 | 13µs | 13µs | __ANON__[(eval 322)[Eval/Closure.pm:125]:162] | Eval::Closure::Sandbox_221::
1 | 1 | 1 | 13µs | 13µs | CORE:sort (opcode) | Exception::Class::
3 | 1 | 1 | 13µs | 14µs | __ANON__[Exporter/Heavy.pm:58] | Exporter::Heavy::
1 | 1 | 1 | 13µs | 25µs | BEGIN@12 | File::Temp::
1 | 1 | 1 | 13µs | 26µs | BEGIN@4 | Moose::Meta::Method::Delegation::
4 | 1 | 1 | 13µs | 62µs | apply_around_method_modifiers | Moose::Meta::Role::Application::
1 | 1 | 1 | 13µs | 56µs | BEGIN@8 | Moose::Meta::Role::Method::Required::
1 | 1 | 1 | 13µs | 28µs | BEGIN@8 | Moose::Meta::TypeConstraint::DuckType::
1 | 1 | 1 | 13µs | 33µs | BEGIN@5 | Opcode::
1 | 1 | 1 | 13µs | 61µs | BEGIN@39 | SelectSaver::
1 | 1 | 1 | 13µs | 42µs | BEGIN@3 | constant::
1 | 1 | 1 | 13µs | 26µs | BEGIN@116 | Bio::AnnotationI::
1 | 1 | 1 | 13µs | 25µs | BEGIN@91 | Bio::Factory::LocationFactoryI::
1 | 1 | 1 | 13µs | 30µs | BEGIN@61 | Carp::
1 | 1 | 1 | 13µs | 26µs | BEGIN@4 | Moose::Meta::Method::Overridden::
1 | 1 | 1 | 13µs | 13µs | types | Text::CSV_PP::
1 | 1 | 1 | 13µs | 22µs | BEGIN@5 | Carp::
1 | 1 | 1 | 13µs | 25µs | BEGIN@4 | Class::MOP::Method::Meta::
1 | 1 | 1 | 13µs | 26µs | BEGIN@4 | Class::MOP::Mixin::
1 | 1 | 1 | 13µs | 23µs | BEGIN@5 | Class::MOP::Mixin::HasOverloads::
1 | 1 | 1 | 13µs | 26µs | BEGIN@7 | Graph::AdjacencyMap::Light::
1 | 1 | 1 | 13µs | 29µs | BEGIN@30 | Graph::
1 | 1 | 1 | 13µs | 105µs | BEGIN@4 | Heap071::Elem::
1 | 1 | 1 | 13µs | 37µs | BEGIN@14 | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 13µs | 442µs | type | Moose::Util::TypeConstraints::
1 | 1 | 1 | 13µs | 56µs | BEGIN@4 | Safe::
1 | 1 | 1 | 13µs | 129µs | BEGIN@49 | Sub::Name::
1 | 1 | 1 | 13µs | 36µs | BEGIN@3652 | B::Deparse::
1 | 1 | 1 | 13µs | 78µs | BEGIN@80 | Bio::Factory::ObjectFactoryI::
1 | 1 | 1 | 13µs | 151µs | BEGIN@202 | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 13µs | 30µs | BEGIN@575 | Carp::
1 | 1 | 1 | 13µs | 21µs | BEGIN@5 | Class::MOP::Class::Immutable::Trait::
1 | 1 | 1 | 13µs | 17µs | BEGIN@5 | Class::MOP::Instance::
1 | 1 | 1 | 13µs | 20µs | BEGIN@5 | Class::MOP::MiniTrait::
11 | 1 | 1 | 13µs | 13µs | CORE:substcont (opcode) | File::Temp::
1 | 1 | 1 | 13µs | 30µs | BEGIN@735 | Moose::Exporter::
1 | 1 | 1 | 13µs | 27µs | BEGIN@4 | Moose::Meta::TypeConstraint::Enum::
5 | 4 | 1 | 13µs | 13µs | CORE:match (opcode) | Sub::Exporter::Progressive::
1 | 1 | 1 | 13µs | 32µs | BEGIN@65 | constant::
1 | 1 | 1 | 13µs | 20µs | BEGIN@5 | metaclass::
1 | 1 | 1 | 13µs | 13µs | BEGIN@26 | B::Deparse::
1 | 1 | 1 | 13µs | 25µs | BEGIN@73 | Bio::DB::InMemoryCache::
1 | 1 | 1 | 13µs | 23µs | BEGIN@2 | Bio::Roary::ClustersRole::
1 | 1 | 1 | 13µs | 55µs | BEGIN@9 | Class::MOP::Method::Wrapped::
1 | 1 | 1 | 13µs | 32µs | BEGIN@9 | Class::MOP::Package::
1 | 1 | 1 | 13µs | 46µs | BEGIN@15 | Devel::StackTrace::
1 | 1 | 1 | 13µs | 333µs | BEGIN@10 | Graph::AdjacencyMatrix::
1 | 1 | 1 | 13µs | 26µs | BEGIN@1 | Moose::Meta::TypeCoercion::
6 | 1 | 1 | 13µs | 13µs | role | Moose::Meta::TypeConstraint::Role::
1 | 1 | 1 | 13µs | 36µs | BEGIN@9 | Try::Tiny::
1 | 1 | 1 | 13µs | 87µs | BEGIN@3 | Bio::Roary::Exceptions::FileNotFound::
1 | 1 | 1 | 13µs | 26µs | BEGIN@4 | Class::MOP::Instance::
1 | 1 | 1 | 13µs | 25µs | BEGIN@4 | Class::MOP::Method::
6 | 1 | 1 | 13µs | 13µs | dl_load_flags | DynaLoader::
1 | 1 | 1 | 13µs | 13µs | CORE:match (opcode) | Eval::Closure::Sandbox_281::
1 | 1 | 1 | 13µs | 103µs | BEGIN@4 | Heap071::Fibonacci::
1 | 1 | 1 | 13µs | 25µs | BEGIN@4 | Moose::Meta::Method::
1 | 1 | 1 | 13µs | 37µs | BEGIN@15 | Moose::Meta::TypeConstraint::DuckType::
1 | 1 | 1 | 13µs | 20µs | BEGIN@10 | Try::Tiny::
1 | 1 | 1 | 13µs | 26µs | BEGIN@10 | mro::
1 | 1 | 1 | 13µs | 26µs | BEGIN@247 | Bio::Tools::GuessSeqFormat::
1 | 1 | 1 | 13µs | 27µs | BEGIN@39 | Class::MOP::Class::Immutable::Trait::
1 | 1 | 1 | 13µs | 52µs | BEGIN@14 | Class::MOP::Method::
1 | 1 | 1 | 13µs | 56µs | BEGIN@11 | Config::
1 | 1 | 1 | 13µs | 50µs | BEGIN@1576 | File::Temp::Dir::
1 | 1 | 1 | 13µs | 19µs | BEGIN@5 | Moose::Meta::Class::Immutable::Trait::
1 | 1 | 1 | 13µs | 25µs | BEGIN@4 | Moose::Meta::Role::Attribute::
1 | 1 | 1 | 13µs | 56µs | BEGIN@10 | Moose::Meta::Role::Composite::
1 | 1 | 1 | 13µs | 27µs | BEGIN@3 | Sub::Identify::
1 | 1 | 1 | 13µs | 25µs | BEGIN@10 | Text::CSV_PP::
1 | 1 | 1 | 13µs | 13µs | BEGIN@2 | Try::Tiny::
1 | 1 | 1 | 12µs | 24µs | BEGIN@459 | Bio::Seq::
1 | 1 | 1 | 12µs | 19µs | BEGIN@5 | Moose::Deprecated::
1 | 1 | 1 | 12µs | 50µs | BEGIN@10 | Moose::Meta::Class::Immutable::Trait::
1 | 1 | 1 | 12µs | 251µs | BEGIN@9 | Moose::Meta::Method::Augmented::
1 | 1 | 1 | 12µs | 212µs | BEGIN@12 | Moose::Meta::Method::Constructor::
1 | 1 | 1 | 12µs | 25µs | BEGIN@4 | Moose::Meta::Role::Method::Required::
3 | 2 | 1 | 12µs | 12µs | CORE:subst (opcode) | Module::Implementation::
1 | 1 | 1 | 12µs | 771µs | BEGIN@12 | B::Deparse::
1 | 1 | 1 | 12µs | 24µs | BEGIN@84 | Bio::AnnotatableI::
1 | 1 | 1 | 12µs | 2.56ms | BEGIN@20 | Bio::Roary::Output::EmblGroups::
2 | 2 | 1 | 12µs | 12µs | dont_delete_files | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 12µs | 986µs | BEGIN@10 | Class::MOP::Method::Constructor::
1 | 1 | 1 | 12µs | 55µs | BEGIN@15 | Class::MOP::Mixin::HasOverloads::
1 | 1 | 1 | 12µs | 54µs | BEGIN@8 | Moose::Meta::Role::Composite::
1 | 1 | 1 | 12µs | 36µs | BEGIN@44 | Sub::Name::
1 | 1 | 1 | 12µs | 23µs | BEGIN@4020 | B::Deparse::
1 | 1 | 1 | 12µs | 49µs | BEGIN@16 | Bio::Roary::CommandLine::RoaryPostAnalysis::
2 | 2 | 1 | 12µs | 12µs | input_files | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 12µs | 47µs | BEGIN@12 | Class::MOP::Package::
1 | 1 | 1 | 12µs | 12µs | TIEHASH | Config::
1 | 1 | 1 | 12µs | 21µs | BEGIN@15 | Devel::OverloadInfo::
1 | 1 | 1 | 12µs | 81µs | BEGIN@4 | File::Spec::
1 | 1 | 1 | 12µs | 25µs | BEGIN@3 | Graph::TransitiveClosure::
1 | 1 | 1 | 12µs | 25µs | BEGIN@3 | Graph::TransitiveClosure::Matrix::
1 | 1 | 1 | 12µs | 181µs | BEGIN@16 | Moose::Meta::Role::
1 | 1 | 1 | 12µs | 243µs | BEGIN@9 | Moose::Meta::Role::Composite::
1 | 1 | 1 | 12µs | 22µs | meta | Moose::Meta::TypeConstraint::Union::
1 | 1 | 1 | 12µs | 26µs | _build_number_of_files | Bio::Roary::OrderGenes::
1 | 1 | 1 | 12µs | 86µs | BEGIN@193 | Bio::Tools::CodonTable::
1 | 1 | 1 | 12µs | 25µs | BEGIN@4 | Class::MOP::Object::
1 | 1 | 1 | 12µs | 63µs | BEGIN@20 | Error::
1 | 1 | 1 | 12µs | 12µs | __ANON__[(eval 421)[Eval/Closure.pm:125]:119] | Eval::Closure::Sandbox_295::
1 | 1 | 1 | 12µs | 38µs | BEGIN@195 | File::Find::Rule::
1 | 1 | 1 | 12µs | 17µs | BEGIN@5 | Moose::Meta::Class::
1 | 1 | 1 | 12µs | 174µs | BEGIN@10 | Moose::Meta::Role::Application::ToRole::
1 | 1 | 1 | 12µs | 24µs | BEGIN@4 | Moose::Meta::TypeCoercion::Union::
2 | 2 | 1 | 12µs | 12µs | fasta_files | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 12µs | 113µs | BEGIN@80 | Bio::Factory::SequenceStreamI::
1 | 1 | 1 | 12µs | 84µs | BEGIN@78 | Bio::Location::FuzzyLocationI::
1 | 1 | 1 | 12µs | 24µs | BEGIN@75 | Bio::LocationI::
1 | 1 | 1 | 12µs | 19µs | _make_tmp_dir | Bio::Roary::SplitGroups::
1 | 1 | 1 | 12µs | 43µs | BEGIN@6 | Bio::Root::IO::
1 | 1 | 1 | 12µs | 34µs | BEGIN@4 | Carp::
1 | 1 | 1 | 12µs | 29µs | BEGIN@29 | Class::MOP::Class::Immutable::Trait::
1 | 1 | 1 | 12µs | 50µs | BEGIN@12 | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 12µs | 53µs | BEGIN@7 | Class::MOP::Package::
1 | 1 | 1 | 12µs | 18µs | BEGIN@3 | Eval::Closure::
1 | 1 | 1 | 12µs | 24µs | BEGIN@7 | Graph::AdjacencyMap::Vertex::
1 | 1 | 1 | 12µs | 58µs | BEGIN@116 | Graph::
1 | 1 | 1 | 12µs | 65µs | BEGIN@11 | Moose::Meta::Method::Destructor::
1 | 1 | 1 | 12µs | 41µs | BEGIN@7 | Moose::Meta::Role::Method::
3 | 1 | 1 | 12µs | 66µs | find_method_by_name | Moose::Meta::Role::
1 | 1 | 1 | 12µs | 27µs | BEGIN@282 | Safe::
1 | 1 | 1 | 12µs | 23µs | BEGIN@9 | B::
1 | 1 | 1 | 12µs | 12µs | BEGIN@99 | Bio::Location::Split::
1 | 1 | 1 | 12µs | 124µs | BEGIN@188 | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 12µs | 20µs | BEGIN@73 | Carp::
1 | 1 | 1 | 12µs | 34µs | BEGIN@30 | List::Util::
1 | 1 | 1 | 12µs | 27µs | BEGIN@334 | Safe::
1 | 1 | 1 | 12µs | 23µs | BEGIN@77 | Bio::Location::WidestCoordPolicy::
1 | 1 | 1 | 12µs | 2.85ms | BEGIN@79 | Bio::LocationI::
1 | 1 | 1 | 12µs | 15.9ms | BEGIN@133 | Bio::PrimarySeq::
1 | 1 | 1 | 12µs | 601µs | BEGIN@154 | Bio::Tools::GFF::
1 | 1 | 1 | 12µs | 28µs | BEGIN@14 | Class::MOP::Class::
1 | 1 | 1 | 12µs | 18µs | BEGIN@5 | Class::MOP::Module::
1 | 1 | 1 | 12µs | 24µs | BEGIN@170 | Cwd::
1 | 1 | 1 | 12µs | 24µs | BEGIN@3 | Devel::StackTrace::Frame::
1 | 1 | 1 | 12µs | 25µs | BEGIN@3 | Graph::UnionFind::
1 | 1 | 1 | 12µs | 26µs | BEGIN@8 | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 12µs | 17µs | BEGIN@7 | Package::DeprecationManager::
1 | 1 | 1 | 12µs | 24µs | BEGIN@77 | Bio::Factory::ObjectFactoryI::
2 | 2 | 1 | 12µs | 12µs | output_filename | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 12µs | 54µs | BEGIN@13 | Bio::Roary::SplitGroups::
1 | 1 | 1 | 12µs | 24µs | BEGIN@111 | Bio::SeqI::
27 | 1 | 1 | 12µs | 12µs | CORE:match (opcode) | Bio::SeqUtils::
1 | 1 | 1 | 12µs | 56µs | BEGIN@9 | Class::MOP::Method::Inlined::
1 | 1 | 1 | 12µs | 61µs | BEGIN@8 | Class::MOP::Overload::
1 | 1 | 1 | 12µs | 42µs | BEGIN@1574 | File::Temp::Dir::
1 | 1 | 1 | 12µs | 24µs | BEGIN@3 | Graph::AdjacencyMap::
1 | 1 | 1 | 12µs | 46µs | BEGIN@7 | Moose::Exporter::
2 | 2 | 1 | 12µs | 12µs | _build_public_installer | Sub::Install::
1 | 1 | 1 | 12µs | 23µs | BEGIN@95 | Bio::FeatureHolderI::
1 | 1 | 1 | 12µs | 12µs | __ANON__[lib/Bio/Roary/AnnotateGroups.pm:31] | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 12µs | 16µs | DESTROY | Bio::Roary::SplitGroups::
1 | 1 | 1 | 12µs | 64µs | BEGIN@84 | Bio::Root::RootI::
1 | 1 | 1 | 12µs | 30µs | BEGIN@2 | Eval::Closure::
1 | 1 | 1 | 12µs | 12µs | __ANON__[(eval 466)[Eval/Closure.pm:125]:123] | Eval::Closure::Sandbox_323::
1 | 1 | 1 | 12µs | 23µs | BEGIN@3 | Graph::AdjacencyMatrix::
1 | 1 | 1 | 12µs | 18µs | BEGIN@5 | Moose::Exporter::
4 | 1 | 1 | 12µs | 12µs | _get_role_applications | Moose::Meta::Class::
1 | 1 | 1 | 12µs | 32µs | BEGIN@10 | Moose::Meta::TypeCoercion::Union::
1 | 1 | 1 | 12µs | 24µs | BEGIN@2 | Number::Compare::
1 | 1 | 1 | 12µs | 17µs | BEGIN@4 | Sub::Exporter::Progressive::
1 | 1 | 1 | 12µs | 98µs | BEGIN@107 | Bio::LocatableSeq::
1 | 1 | 1 | 12µs | 21µs | _delete_intermediate_files | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 12µs | 63µs | BEGIN@15 | Bio::Roary::SplitGroups::
1 | 1 | 1 | 12µs | 12µs | __ANON__[(eval 452)[Eval/Closure.pm:125]:139] | Eval::Closure::Sandbox_309::
1 | 1 | 1 | 12µs | 12µs | CORE:closedir (opcode) | File::Path::
1 | 1 | 1 | 12µs | 54µs | BEGIN@8 | Moose::Meta::Method::Destructor::
4 | 1 | 1 | 12µs | 12µs | get_excluded_roles_map | Moose::Meta::Role::
1 | 1 | 1 | 12µs | 89µs | BEGIN@70 | Bio::DescribableI::
1 | 1 | 1 | 12µs | 116µs | BEGIN@65 | Bio::Roary::GeneNamesFromGFF::
1 | 1 | 1 | 12µs | 25µs | BEGIN@14 | File::Copy::
1 | 1 | 1 | 12µs | 12µs | CORE:readlink (opcode) | FindBin::
1 | 1 | 1 | 12µs | 54µs | BEGIN@9 | Moose::Meta::Instance::
1 | 1 | 1 | 12µs | 47µs | BEGIN@7 | Moose::Meta::Method::Constructor::
1 | 1 | 1 | 12µs | 3.70ms | BEGIN@7 | Moose::Meta::Method::Overridden::
4 | 1 | 1 | 12µs | 12µs | get_after_method_modifiers_map | Moose::Meta::Role::
4 | 1 | 1 | 12µs | 12µs | get_override_method_modifiers_map | Moose::Meta::Role::
1 | 1 | 1 | 12µs | 12µs | BEGIN@10 | Package::Stash::XS::
1 | 1 | 1 | 12µs | 92µs | BEGIN@50 | Sub::Name::
2 | 2 | 1 | 11µs | 11µs | fasta_files | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 11µs | 19.7ms | BEGIN@120 | Bio::LocatableSeq::
2 | 2 | 1 | 11µs | 11µs | clusters_filename | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 11µs | 12µs | DESTROY | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 11µs | 18µs | BEGIN@5 | Class::MOP::Method::Inlined::
1 | 1 | 1 | 11µs | 421µs | BEGIN@104 | IO::Seekable::
1 | 1 | 1 | 11µs | 46µs | BEGIN@21 | Moose::Meta::Attribute::
1 | 1 | 1 | 11µs | 214µs | BEGIN@12 | Moose::Meta::Class::Immutable::Trait::
1 | 1 | 1 | 11µs | 15µs | BEGIN@5 | Moose::Meta::TypeConstraint::Union::
1 | 1 | 1 | 11µs | 29µs | BEGIN@23 | Sub::Exporter::Progressive::
1 | 1 | 1 | 11µs | 535µs | BEGIN@96 | Bio::Annotation::Collection::
2 | 2 | 1 | 11µs | 11µs | output_statistics_filename | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 11µs | 110µs | BEGIN@88 | Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::
1 | 1 | 1 | 11µs | 22µs | meta | Bio::Roary::External::ProteinMuscleAlignmentFromNucleotides::
2 | 1 | 1 | 11µs | 11µs | _header_bottom | Bio::Roary::Output::EmblGroups::
1 | 1 | 1 | 11µs | 112µs | BEGIN@116 | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 11µs | 11µs | output_statistics_filename | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 11µs | 17µs | BEGIN@5 | Class::MOP::
1 | 1 | 1 | 11µs | 152µs | BEGIN@7 | Class::MOP::Deprecated::
1 | 1 | 1 | 11µs | 17µs | BEGIN@5 | Class::MOP::Package::
1 | 1 | 1 | 11µs | 16µs | BEGIN@4 | Devel::GlobalDestruction::
1 | 1 | 1 | 11µs | 64µs | BEGIN@127 | File::Spec::Unix::
1 | 1 | 1 | 11µs | 54µs | BEGIN@263 | IO::Handle::
1 | 1 | 1 | 11µs | 39µs | BEGIN@4 | List::MoreUtils::
1 | 1 | 1 | 11µs | 16µs | BEGIN@5 | Moose::Meta::Method::Delegation::
1 | 1 | 1 | 11µs | 212µs | BEGIN@14 | Moose::Meta::Method::Destructor::
2 | 2 | 1 | 11µs | 11µs | dont_create_rplots | Bio::Roary::CommandLine::RoaryPostAnalysis::
2 | 2 | 1 | 11µs | 11µs | dont_delete_files | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 11µs | 14µs | BEGIN@3914 | B::Deparse::
1 | 1 | 1 | 11µs | 2.10ms | BEGIN@5 | Bio::Root::Root::
1 | 1 | 1 | 11µs | 62µs | BEGIN@92 | Bio::SeqAnalysisParserI::
1 | 1 | 1 | 11µs | 42µs | BEGIN@15 | Class::MOP::Class::
1 | 1 | 1 | 11µs | 11µs | BEGIN@15 | Data::OptList::
1 | 1 | 1 | 11µs | 11µs | __ANON__[(eval 380)[Eval/Closure.pm:125]:111] | Eval::Closure::Sandbox_254::
1 | 1 | 1 | 11µs | 28µs | BEGIN@197 | Exporter::Heavy::
1 | 1 | 1 | 11µs | 83µs | BEGIN@13 | Graph::AdjacencyMap::Heavy::
1 | 1 | 1 | 11µs | 50µs | BEGIN@7 | Moose::Meta::Attribute::
1 | 1 | 1 | 11µs | 28µs | BEGIN@79 | Moose::Object::
1 | 1 | 1 | 11µs | 162µs | BEGIN@11 | POSIX::
1 | 1 | 1 | 11µs | 30µs | BEGIN@8 | Package::Stash::XS::
1 | 1 | 1 | 11µs | 27µs | BEGIN@18 | Sub::Exporter::Progressive::
1 | 1 | 1 | 11µs | 95µs | BEGIN@96 | Bio::IdentifiableI::
1 | 1 | 1 | 11µs | 23µs | BEGIN@91 | Bio::RangeI::
1 | 1 | 1 | 11µs | 51µs | BEGIN@4 | Bio::Root::Root::
1 | 1 | 1 | 11µs | 11µs | BEGIN@51 | File::Basename::
1 | 1 | 1 | 11µs | 23µs | BEGIN@178 | Graph::
1 | 1 | 1 | 11µs | 26µs | BEGIN@674 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 11µs | 47µs | BEGIN@9 | Package::DeprecationManager::
1 | 1 | 1 | 11µs | 22µs | BEGIN@2 | Text::Glob::
1 | 1 | 1 | 11µs | 11µs | BEGIN@616 | B::Deparse::
1 | 1 | 1 | 11µs | 11µs | BEGIN@98 | Bio::RangeI::
1 | 1 | 1 | 11µs | 20µs | meta | Bio::Roary::Output::GroupsMultifastaNucleotide::
1 | 1 | 1 | 11µs | 26µs | BEGIN@359 | Bio::Root::IO::
1 | 1 | 1 | 11µs | 491µs | BEGIN@335 | Bio::SeqIO::
1 | 1 | 1 | 11µs | 55µs | BEGIN@13 | Eval::Closure::
1 | 1 | 1 | 11µs | 11µs | __ANON__[(eval 209)[Eval/Closure.pm:125]:123] | Eval::Closure::Sandbox_178::
1 | 1 | 1 | 11µs | 12µs | O_TEMPORARY | Fcntl::
1 | 1 | 1 | 11µs | 46µs | BEGIN@84 | FindBin::
1 | 1 | 1 | 11µs | 17µs | BEGIN@5 | Moose::Meta::Method::Constructor::
1 | 1 | 1 | 11µs | 703µs | BEGIN@6 | Moose::Meta::Role::Composite::
1 | 1 | 1 | 11µs | 45µs | BEGIN@14 | Bio::Roary::SplitGroups::
1 | 1 | 1 | 11µs | 19µs | BEGIN@5 | Class::MOP::Class::
1 | 1 | 1 | 11µs | 17µs | BEGIN@5 | Class::MOP::Method::Generated::
1 | 1 | 1 | 11µs | 22µs | BEGIN@3 | Graph::BitMatrix::
4 | 1 | 1 | 11µs | 11µs | get_around_method_modifiers_map | Moose::Meta::Role::
1 | 1 | 1 | 11µs | 37µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:170] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 11µs | 18µs | BEGIN@148 | Sub::Install::
1 | 1 | 1 | 11µs | 829µs | BEGIN@9 | Class::MOP::Method::
1 | 1 | 1 | 11µs | 44µs | BEGIN@7 | Class::MOP::Method::Inlined::
2 | 2 | 1 | 11µs | 11µs | CORE:match (opcode) | Eval::Closure::Sandbox_388::
1 | 1 | 1 | 11µs | 61µs | BEGIN@219 | Getopt::Long::
1 | 1 | 1 | 11µs | 18µs | BEGIN@5 | Moose::Meta::Role::Composite::
4 | 1 | 1 | 11µs | 11µs | get_before_method_modifiers_map | Moose::Meta::Role::
1 | 1 | 1 | 11µs | 47µs | BEGIN@14 | Moose::Meta::TypeConstraint::
3 | 3 | 1 | 11µs | 11µs | _installer | Sub::Install::
1 | 1 | 1 | 11µs | 3.78ms | BEGIN@81 | Bio::Location::Atomic::
1 | 1 | 1 | 11µs | 71µs | BEGIN@3 | Bio::Roary::Exceptions::CouldntWriteToFile::
1 | 1 | 1 | 11µs | 116µs | BEGIN@106 | Bio::Roary::InflateClusters::
1 | 1 | 1 | 11µs | 112µs | BEGIN@239 | Bio::Roary::Output::EmblGroups::
1 | 1 | 1 | 11µs | 131µs | BEGIN@225 | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 11µs | 11µs | BEGIN@12 | Bio::Roary::SplitGroups::
1 | 1 | 1 | 11µs | 19µs | BEGIN@10 | Class::MOP::
1 | 1 | 1 | 11µs | 11µs | BEGIN@22 | Class::MOP::
1 | 1 | 1 | 11µs | 21µs | BEGIN@45 | Exception::Class::
1 | 1 | 1 | 11µs | 63µs | BEGIN@9 | Moose::Meta::Method::Constructor::
1 | 1 | 1 | 11µs | 17µs | BEGIN@5 | Moose::Meta::Role::Method::Conflicting::
2 | 2 | 1 | 11µs | 11µs | output_pan_geneome_filename | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 11µs | 50µs | BEGIN@333 | Bio::SeqIO::
1 | 1 | 1 | 11µs | 19µs | BEGIN@190 | Bio::SeqUtils::
1 | 1 | 1 | 11µs | 589µs | BEGIN@6 | Moose::Meta::Role::Application::
1 | 1 | 1 | 11µs | 32µs | BEGIN@10 | Moose::Meta::Role::Application::ToClass::
1 | 1 | 1 | 11µs | 36µs | BEGIN@8 | Moose::Meta::Role::Application::ToClass::
1 | 1 | 1 | 11µs | 283µs | BEGIN@13 | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 11µs | 45µs | BEGIN@7 | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 10µs | 763µs | BEGIN@77 | Bio::DB::InMemoryCache::
1 | 1 | 1 | 10µs | 115µs | BEGIN@59 | Bio::Roary::GroupLabels::
1 | 1 | 1 | 10µs | 64µs | BEGIN@199 | Bio::Tools::CodonTable::
1 | 1 | 1 | 10µs | 11µs | O_NOINHERIT | Fcntl::
1 | 1 | 1 | 10µs | 261µs | BEGIN@166 | FindBin::
1 | 1 | 1 | 10µs | 51µs | BEGIN@90 | Bio::Range::
1 | 1 | 1 | 10µs | 116µs | BEGIN@75 | Bio::Roary::Output::GroupsMultifastasNucleotide::
1 | 1 | 1 | 10µs | 115µs | BEGIN@318 | Bio::Roary::SplitGroups::
1 | 1 | 1 | 10µs | 22µs | BEGIN@242 | Bio::Root::RootI::
1 | 1 | 1 | 10µs | 25µs | BEGIN@187 | Bio::Tools::CodonTable::
1 | 1 | 1 | 10µs | 54µs | BEGIN@4 | Clone::
1 | 1 | 1 | 10µs | 10µs | __ANON__[(eval 195)[Eval/Closure.pm:125]:96] | Eval::Closure::Sandbox_164::
1 | 1 | 1 | 10µs | 10µs | BEGIN@2155 | Graph::
1 | 1 | 1 | 10µs | 10µs | BEGIN@17 | Moose::
1 | 1 | 1 | 10µs | 6.36ms | BEGIN@19 | Moose::Meta::Attribute::
1 | 1 | 1 | 10µs | 10µs | BEGIN@7 | Moose::Meta::Instance::
1 | 1 | 1 | 10µs | 58µs | BEGIN@19 | Moose::Meta::Role::Application::ToInstance::
1 | 1 | 1 | 10µs | 155µs | BEGIN@11 | Moose::Role::
1 | 1 | 1 | 10µs | 12µs | _generate_clearer_method | Class::MOP::Method::Accessor::
6 | 1 | 1 | 10µs | 10µs | dl_undef_symbols (xsub) | DynaLoader::
1 | 1 | 1 | 10µs | 20µs | BEGIN@511 | File::Find::Rule::
1 | 1 | 1 | 10µs | 221µs | BEGIN@11 | Moose::Meta::Role::Application::
1 | 1 | 1 | 10µs | 33µs | BEGIN@8 | Moose::Meta::Role::Application::ToRole::
2 | 1 | 1 | 10µs | 92µs | _parse_type_parameter | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 10µs | 765µs | BEGIN@17 | B::
1 | 1 | 1 | 10µs | 113µs | BEGIN@38 | Bio::Roary::CommandLine::Common::
1 | 1 | 1 | 10µs | 53µs | BEGIN@16 | Bio::Roary::SplitGroups::
1 | 1 | 1 | 10µs | 45µs | BEGIN@192 | Bio::SeqUtils::
1 | 1 | 1 | 10µs | 15µs | BEGIN@12 | Class::MOP::
1 | 1 | 1 | 10µs | 10µs | BEGIN@371 | File::Basename::
1 | 1 | 1 | 10µs | 29µs | BEGIN@17 | Getopt::Long::
8 | 1 | 1 | 10µs | 10µs | CORE:match (opcode) | Moose::Meta::Attribute::
4 | 1 | 1 | 10µs | 10µs | __ANON__[Moose/Meta/Role/Application.pm:23] | Moose::Meta::Role::Application::
1 | 1 | 1 | 10µs | 10µs | output_raw_filename_conserved_genes | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 10µs | 10µs | BEGIN@49 | Carp::
1 | 1 | 1 | 10µs | 10µs | BEGIN@7 | Class::MOP::Attribute::
1 | 1 | 1 | 10µs | 33µs | BEGIN@15 | Eval::Closure::
1 | 1 | 1 | 10µs | 1.46ms | BEGIN@40 | Moose::
1 | 1 | 1 | 10µs | 18µs | BEGIN@12 | Moose::Meta::Attribute::
1 | 1 | 1 | 10µs | 42µs | BEGIN@9 | Moose::Meta::Attribute::
1 | 1 | 1 | 10µs | 40µs | BEGIN@13 | Moose::Meta::TypeConstraint::Parameterized::
1 | 1 | 1 | 10µs | 10µs | __ANON__[lib/Bio/Roary/Output/NumberOfGroups.pm:31] | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 10µs | 20µs | BEGIN@562 | Bio::Root::RootI::
1 | 1 | 1 | 10µs | 10µs | BEGIN@462 | Bio::Seq::
1 | 1 | 1 | 10µs | 10µs | BEGIN@171 | Carp::
1 | 1 | 1 | 10µs | 33µs | BEGIN@234 | Getopt::Long::
1 | 1 | 1 | 10µs | 48µs | BEGIN@98 | IO::Seekable::
1 | 1 | 1 | 10µs | 206µs | BEGIN@12 | Moose::Meta::Method::Accessor::
1 | 1 | 1 | 10µs | 210µs | BEGIN@11 | Moose::Meta::TypeCoercion::
1 | 1 | 1 | 10µs | 185µs | BEGIN@11 | Moose::Meta::TypeConstraint::Parameterized::
1 | 1 | 1 | 10µs | 11µs | _loose_name | utf8::
1 | 1 | 1 | 10µs | 58µs | BEGIN@82 | Bio::Location::SplitLocationI::
1 | 1 | 1 | 10µs | 96µs | BEGIN@142 | Bio::Roary::AnalyseGroups::
1 | 1 | 1 | 10µs | 10µs | BEGIN@18 | Bio::Roary::ContigsToGeneIDsFromGFF::
1 | 1 | 1 | 10µs | 85µs | BEGIN@8 | Bio::Root::IO::
1 | 1 | 1 | 10µs | 45µs | BEGIN@6 | File::Grep::
1 | 1 | 1 | 10µs | 29µs | BEGIN@15 | Graph::
6 | 2 | 1 | 10µs | 10µs | __ANON__[Moose/Meta/Role.pm:84] | Moose::Meta::Role::
1 | 1 | 1 | 10µs | 40µs | BEGIN@16 | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 10µs | 33µs | BEGIN@11 | Text::CSV_PP::
1 | 1 | 1 | 10µs | 20µs | BEGIN@25 | parent::
1 | 1 | 1 | 10µs | 540µs | BEGIN@84 | Bio::Location::Fuzzy::
1 | 1 | 1 | 10µs | 100µs | BEGIN@142 | Bio::Roary::ContigsToGeneIDsFromGFF::
1 | 1 | 1 | 10µs | 10µs | BEGIN@22 | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 10µs | 10µs | BEGIN@22 | Bio::Roary::Output::EmblGroups::
1 | 1 | 1 | 10µs | 7.23ms | BEGIN@151 | Bio::SeqFeature::Generic::
1 | 1 | 1 | 10µs | 22µs | BEGIN@95 | Class::MOP::Package::
1 | 1 | 1 | 10µs | 34µs | BEGIN@12 | Graph::AdjacencyMap::Light::
1 | 1 | 1 | 10µs | 46µs | BEGIN@264 | IO::Handle::
1 | 1 | 1 | 10µs | 33µs | BEGIN@9 | Moose::Meta::Role::Application::RoleSummation::
1 | 1 | 1 | 10µs | 57µs | BEGIN@10 | Moose::Meta::Role::Attribute::
1 | 1 | 1 | 10µs | 18µs | BEGIN@5 | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 10µs | 23µs | BEGIN@842 | Cwd::
1 | 1 | 1 | 10µs | 48µs | BEGIN@17 | Devel::OverloadInfo::
1 | 1 | 1 | 10µs | 43µs | BEGIN@16 | Eval::Closure::
1 | 1 | 1 | 10µs | 55µs | BEGIN@33 | File::Temp::
1 | 1 | 1 | 10µs | 25µs | BEGIN@39 | MRO::Compat::
1 | 1 | 1 | 10µs | 27µs | BEGIN@6 | Moose::Meta::Attribute::Native::
4 | 1 | 1 | 10µs | 10µs | get_required_methods_map | Moose::Meta::Role::
1 | 1 | 1 | 10µs | 92µs | BEGIN@18 | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 10µs | 41µs | BEGIN@8 | Moose::Meta::TypeConstraint::Parameterized::
1 | 1 | 1 | 10µs | 24µs | BEGIN@254 | B::
2 | 2 | 1 | 10µs | 10µs | _output_group_labels_filename | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 10µs | 71µs | BEGIN@93 | Bio::SeqAnalysisParserI::
1 | 1 | 1 | 10µs | 55µs | BEGIN@22 | Data::Dumper::
1 | 1 | 1 | 10µs | 10µs | __ANON__[(eval 99)[Eval/Closure.pm:125]:106] | Eval::Closure::Sandbox_74::
1 | 1 | 1 | 10µs | 34µs | BEGIN@18 | File::Temp::
1 | 1 | 1 | 10µs | 37µs | BEGIN@25 | Getopt::Long::
1 | 1 | 1 | 10µs | 73µs | BEGIN@46 | Getopt::Long::
1 | 1 | 1 | 10µs | 37µs | BEGIN@10 | Moose::Meta::Class::
1 | 1 | 1 | 10µs | 17µs | BEGIN@5 | Moose::Meta::Role::Application::
1 | 1 | 1 | 10µs | 31µs | BEGIN@15 | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 10µs | 32µs | BEGIN@9 | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 10µs | 32µs | BEGIN@3 | Text::Glob::
1 | 1 | 1 | 10µs | 18µs | BEGIN@3720 | B::Deparse::
1 | 1 | 1 | 10µs | 17µs | meta | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 10µs | 37.0ms | BEGIN@83 | Bio::Seq::SeqFactory::
1 | 1 | 1 | 10µs | 30µs | BEGIN@4 | Sub::Identify::
1 | 1 | 1 | 9µs | 28µs | BEGIN@24 | B::Deparse::
1 | 1 | 1 | 9µs | 24µs | BEGIN@3653 | B::Deparse::
1 | 1 | 1 | 9µs | 69µs | BEGIN@126 | Bio::PrimarySeqI::
1 | 1 | 1 | 9µs | 36µs | BEGIN@94 | Bio::RangeI::
1 | 1 | 1 | 9µs | 9µs | job_runner | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 9µs | 22µs | BEGIN@227 | Bio::Root::RootI::
1 | 1 | 1 | 9µs | 18µs | BEGIN@8 | IO::
1 | 1 | 1 | 9µs | 16µs | BEGIN@8 | Moose::Meta::Class::
1 | 1 | 1 | 9µs | 40µs | BEGIN@13 | Moose::Meta::Role::Application::RoleSummation::
1 | 1 | 1 | 9µs | 36µs | BEGIN@3 | parent::
1 | 1 | 1 | 9µs | 9µs | (cmp (xsub) | version::
1 | 1 | 1 | 9µs | 26µs | BEGIN@3721 | B::Deparse::
1 | 1 | 1 | 9µs | 57µs | BEGIN@92 | Bio::Factory::LocationFactoryI::
1 | 1 | 1 | 9µs | 12µs | BEGIN@91 | Bio::Range::
1 | 1 | 1 | 9µs | 9µs | __ANON__[lib/Bio/Roary/OrderGenes.pm:33] | Bio::Roary::OrderGenes::
1 | 1 | 1 | 9µs | 40µs | BEGIN@17 | Bio::Roary::SplitGroups::
1 | 1 | 1 | 9µs | 16µs | meta | Bio::Roary::SplitGroups::
1 | 1 | 1 | 9µs | 9µs | BEGIN@3 | Carp::Heavy::
1 | 1 | 1 | 9µs | 25µs | BEGIN@8 | Class::MOP::Mixin::
1 | 1 | 1 | 9µs | 82µs | BEGIN@10 | Exception::Class::Base::
1 | 1 | 1 | 9µs | 9µs | BEGIN@42 | File::Basename::
2 | 1 | 1 | 9µs | 9µs | updir | File::Spec::Unix::
1 | 1 | 1 | 9µs | 130µs | BEGIN@41 | Moose::
1 | 1 | 1 | 9µs | 17µs | meta | Moose::Meta::TypeConstraint::Class::
1 | 1 | 1 | 9µs | 17µs | meta | Moose::Meta::TypeConstraint::DuckType::
1 | 1 | 1 | 9µs | 30µs | BEGIN@12 | Moose::Meta::TypeConstraint::Role::
1 | 1 | 1 | 9µs | 9µs | BEGIN@4 | Moose::Util::TypeConstraints::
2 | 1 | 1 | 9µs | 10µs | remove_symbol (xsub) | Package::Stash::XS::
1 | 1 | 1 | 9µs | 21µs | BEGIN@341 | Safe::
1 | 1 | 1 | 9µs | 55µs | BEGIN@13 | Text::Glob::
1 | 1 | 1 | 9µs | 77µs | BEGIN@120 | Bio::AnnotationI::
1 | 1 | 1 | 9µs | 127µs | BEGIN@94 | Bio::Range::
1 | 1 | 1 | 9µs | 9µs | BEGIN@20 | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 9µs | 9µs | BEGIN@19 | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 9µs | 9µs | output_raw_filename_total_genes | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 9µs | 83µs | BEGIN@169 | Bio::Tools::IUPAC::
1 | 1 | 1 | 9µs | 60µs | BEGIN@10 | Class::MOP::Method::Meta::
1 | 1 | 1 | 9µs | 38µs | BEGIN@242 | File::Spec::Unix::
1 | 1 | 1 | 9µs | 36µs | BEGIN@11 | Moose::Meta::Role::Method::Required::
1 | 1 | 1 | 9µs | 6.19ms | BEGIN@18 | Moose::Role::
1 | 1 | 1 | 9µs | 9µs | CORE:match (opcode) | strict::
1 | 1 | 1 | 9µs | 9µs | BEGIN@148 | Bio::SeqFeature::Generic::
1 | 1 | 1 | 9µs | 315µs | _new | Class::MOP::Object::
1 | 1 | 1 | 9µs | 50µs | BEGIN@12 | Devel::StackTrace::
1 | 1 | 1 | 9µs | 16µs | BEGIN@4 | Exception::Class::Base::
1 | 1 | 1 | 9µs | 60µs | BEGIN@84 | File::Temp::
1 | 1 | 1 | 9µs | 9µs | BEGIN@37 | Getopt::Long::
1 | 1 | 1 | 9µs | 124µs | BEGIN@48 | Getopt::Long::
1 | 1 | 1 | 9µs | 47µs | BEGIN@6 | IO::
1 | 1 | 1 | 9µs | 144µs | BEGIN@12 | Moose::Meta::Method::Delegation::
1 | 1 | 1 | 9µs | 17µs | BEGIN@5 | Moose::Meta::Role::
1 | 1 | 1 | 9µs | 35µs | BEGIN@16 | Moose::Role::
1 | 1 | 1 | 9µs | 82µs | BEGIN@86 | Bio::Annotation::TypeManager::
1 | 1 | 1 | 9µs | 481µs | BEGIN@102 | Bio::Factory::FTLocationFactory::
1 | 1 | 1 | 9µs | 15µs | BEGIN@104 | Bio::Factory::FTLocationFactory::
1 | 1 | 1 | 9µs | 69µs | BEGIN@94 | Bio::Factory::LocationFactoryI::
1 | 1 | 1 | 9µs | 9µs | output_filename | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 9µs | 37µs | BEGIN@9 | Class::MOP::Instance::
1 | 1 | 1 | 9µs | 22µs | BEGIN@329 | File::Path::
3 | 1 | 1 | 9µs | 9µs | _die_if_also_list_cycles_back_to_existing_stack | Moose::Exporter::
1 | 1 | 1 | 9µs | 45µs | BEGIN@8 | Moose::Meta::Role::
1 | 1 | 1 | 9µs | 16µs | BEGIN@5 | Moose::Meta::TypeCoercion::
1 | 1 | 1 | 9µs | 9µs | BEGIN@9 | Moose::Meta::TypeConstraint::Parameterized::
1 | 1 | 1 | 9µs | 15µs | BEGIN@5 | Moose::Object::
1 | 1 | 1 | 9µs | 176µs | BEGIN@14 | Moose::Role::
1 | 1 | 1 | 9µs | 18µs | BEGIN@680 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 9µs | 424µs | BEGIN@88 | Bio::Factory::SequenceFactoryI::
1 | 1 | 1 | 9µs | 32µs | BEGIN@10 | Exception::Class::
1 | 1 | 1 | 9µs | 9µs | BEGIN@5 | IO::
1 | 1 | 1 | 9µs | 17µs | BEGIN@5 | Moose::Meta::Mixin::AttributeCore::
1 | 1 | 1 | 9µs | 183µs | BEGIN@15 | Moose::Meta::Role::Application::RoleSummation::
1 | 1 | 1 | 9µs | 15µs | BEGIN@5 | Moose::Meta::TypeConstraint::Class::
1 | 1 | 1 | 9µs | 14µs | BEGIN@7 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 9µs | 9µs | BEGIN@13 | Opcode::
2 | 2 | 1 | 9µs | 9µs | CORE:qr (opcode) | Text::CSV_PP::
1 | 1 | 1 | 9µs | 62µs | BEGIN@98 | Bio::Factory::ObjectBuilderI::
1 | 1 | 1 | 9µs | 6.21ms | BEGIN@87 | Bio::Location::Simple::
1 | 1 | 1 | 9µs | 9µs | core_accessory_tab_output_filename | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 9µs | 47µs | BEGIN@107 | Bio::SeqFeatureI::
3 | 1 | 1 | 9µs | 9µs | get_subname | Carp::
1 | 1 | 1 | 9µs | 9µs | BEGIN@7 | Class::MOP::Class::Immutable::Trait::
1 | 1 | 1 | 9µs | 15µs | BEGIN@52 | File::Basename::
1 | 1 | 1 | 9µs | 146µs | BEGIN@15 | Moose::Meta::Attribute::
1 | 1 | 1 | 9µs | 153µs | BEGIN@20 | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 9µs | 34µs | BEGIN@9 | Moose::Meta::TypeConstraint::DuckType::
1 | 1 | 1 | 9µs | 32µs | BEGIN@8 | Moose::Meta::TypeConstraint::Registry::
1 | 1 | 1 | 9µs | 16µs | meta | Moose::Meta::TypeConstraint::Role::
1 | 1 | 1 | 9µs | 466µs | BEGIN@82 | Bio::Annotation::SimpleValue::
1 | 1 | 1 | 9µs | 15µs | meta | Bio::Roary::Output::GroupsMultifastasNucleotide::
1 | 1 | 1 | 9µs | 95µs | BEGIN@170 | Bio::Tools::IUPAC::
1 | 1 | 1 | 9µs | 37µs | BEGIN@15 | Error::
1 | 1 | 1 | 9µs | 44µs | BEGIN@42 | Exception::Class::Base::
1 | 1 | 1 | 9µs | 16µs | BEGIN@4 | File::Find::
1 | 1 | 1 | 9µs | 21µs | BEGIN@18 | File::Find::Rule::
1 | 1 | 1 | 9µs | 68µs | BEGIN@9 | Graph::TransitiveClosure::
1 | 1 | 1 | 9µs | 55µs | BEGIN@9 | Moose::Meta::Method::Accessor::
1 | 1 | 1 | 9µs | 37µs | BEGIN@8 | Moose::Meta::Role::Application::ToInstance::
1 | 1 | 1 | 9µs | 201µs | BEGIN@12 | Moose::Meta::Role::Attribute::
1 | 1 | 1 | 9µs | 14µs | BEGIN@5 | Moose::Meta::TypeConstraint::Parameterized::
1 | 1 | 1 | 9µs | 9µs | BEGIN@13 | AutoLoader::
1 | 1 | 1 | 9µs | 9µs | fixed_headers | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 9µs | 9µs | BEGIN@19 | Bio::Roary::OrderGenes::
1 | 1 | 1 | 9µs | 50µs | BEGIN@7 | Class::MOP::Instance::
1 | 1 | 1 | 9µs | 9µs | BEGIN@12 | Data::Dumper::
1 | 1 | 1 | 9µs | 23µs | BEGIN@9 | Errno::
1 | 1 | 1 | 9µs | 9µs | __ANON__[(eval 218)[Eval/Closure.pm:125]:85] | Eval::Closure::Sandbox_187::
1 | 1 | 1 | 9µs | 24µs | BEGIN@7 | Exception::Class::
1 | 1 | 1 | 9µs | 67µs | BEGIN@10 | Graph::AdjacencyMap::Light::
1 | 1 | 1 | 9µs | 9µs | BEGIN@17 | Moose::Meta::Attribute::
1 | 1 | 1 | 9µs | 31µs | BEGIN@8 | Moose::Meta::TypeCoercion::Union::
1 | 1 | 1 | 9µs | 26µs | BEGIN@8 | Moose::Meta::TypeConstraint::Role::
1 | 1 | 1 | 9µs | 34µs | BEGIN@6 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 9µs | 16µs | BEGIN@3 | POSIX::
1 | 1 | 1 | 9µs | 19µs | BEGIN@197 | Text::CSV::
1 | 1 | 1 | 8µs | 69µs | BEGIN@137 | Bio::AnnotationCollectionI::
1 | 1 | 1 | 8µs | 46µs | BEGIN@78 | Bio::Factory::ObjectFactoryI::
1 | 1 | 1 | 8µs | 15µs | meta | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 8µs | 15µs | meta | Bio::Roary::GeneNamesFromGFF::
1 | 1 | 1 | 8µs | 15µs | meta | Bio::Roary::Output::EmblGroups::
1 | 1 | 1 | 8µs | 8µs | BEGIN@21 | Bio::Roary::Output::GroupsMultifastasNucleotide::
1 | 1 | 1 | 8µs | 22µs | BEGIN@171 | Class::MOP::Package::
1 | 1 | 1 | 8µs | 77µs | BEGIN@5 | Clone::
1 | 1 | 1 | 8µs | 18µs | BEGIN@71 | Exception::Class::Base::
1 | 1 | 1 | 8µs | 20µs | BEGIN@179 | File::Spec::Unix::
1 | 1 | 1 | 8µs | 252µs | BEGIN@9 | Graph::AdjacencyMap::Light::
1 | 1 | 1 | 8µs | 19µs | BEGIN@228 | MRO::Compat::
1 | 1 | 1 | 8µs | 8µs | BEGIN@32 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 8µs | 17µs | BEGIN@699 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 8µs | 13µs | BEGIN@9 | Package::Stash::XS::
1 | 1 | 1 | 8µs | 8µs | BEGIN@178 | utf8::
1 | 1 | 1 | 8µs | 34µs | BEGIN@25 | B::Deparse::
1 | 1 | 1 | 8µs | 15µs | meta | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 8µs | 15µs | meta | Bio::Roary::ContigsToGeneIDsFromGFF::
1 | 1 | 1 | 8µs | 33µs | BEGIN@7 | Class::MOP::Method::Meta::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Class::MOP::Mixin::AttributeCore::
1 | 1 | 1 | 8µs | 66µs | BEGIN@172 | Cwd::
1 | 1 | 1 | 8µs | 8µs | BEGIN@27 | Moose::
1 | 1 | 1 | 8µs | 149µs | BEGIN@19 | Moose::Meta::Class::
1 | 1 | 1 | 8µs | 14µs | BEGIN@5 | Moose::Meta::Role::Application::RoleSummation::
1 | 1 | 1 | 8µs | 32µs | BEGIN@12 | Moose::Meta::Role::Application::ToClass::
1 | 1 | 1 | 8µs | 17µs | BEGIN@685 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 8µs | 40µs | BEGIN@96 | Bio::Factory::ObjectBuilderI::
1 | 1 | 1 | 8µs | 68µs | BEGIN@86 | Bio::Location::CoordinatePolicyI::
1 | 1 | 1 | 8µs | 36µs | BEGIN@92 | Bio::RangeI::
1 | 1 | 1 | 8µs | 8µs | output_filename | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 8µs | 20µs | BEGIN@144 | Bio::Root::IO::
1 | 1 | 1 | 8µs | 19µs | BEGIN@549 | Bio::Root::RootI::
1 | 1 | 1 | 8µs | 32µs | BEGIN@7 | Class::MOP::Mixin::HasAttributes::
1 | 1 | 1 | 8µs | 12µs | BEGIN@9 | Class::MOP::Object::
1 | 1 | 1 | 8µs | 31µs | BEGIN@8 | Exception::Class::Base::
1 | 1 | 1 | 8µs | 50µs | BEGIN@11 | File::Temp::
1 | 1 | 1 | 8µs | 65µs | BEGIN@37 | File::Temp::
1 | 1 | 1 | 8µs | 19µs | BEGIN@14 | Graph::Attribute::
1 | 1 | 1 | 8µs | 20µs | BEGIN@118 | MRO::Compat::
1 | 1 | 1 | 8µs | 58µs | BEGIN@19 | Moose::Meta::Role::
1 | 1 | 1 | 8µs | 76µs | BEGIN@4 | Text::Glob::
1 | 1 | 1 | 8µs | 20µs | BEGIN@127 | constant::
1 | 1 | 1 | 8µs | 8µs | BEGIN@166 | utf8::
1 | 1 | 1 | 8µs | 20µs | BEGIN@30 | AutoLoader::
1 | 1 | 1 | 8µs | 46µs | BEGIN@96 | Bio::FeatureHolderI::
1 | 1 | 1 | 8µs | 71µs | BEGIN@84 | Bio::Location::SplitLocationI::
1 | 1 | 1 | 8µs | 15µs | meta | Bio::Roary::InflateClusters::
1 | 1 | 1 | 8µs | 14µs | BEGIN@328 | Bio::SeqIO::
1 | 1 | 1 | 8µs | 13µs | BEGIN@248 | Bio::Tools::GuessSeqFormat::
1 | 1 | 1 | 8µs | 8µs | iupac_iup | Bio::Tools::IUPAC::
1 | 1 | 1 | 8µs | 31µs | BEGIN@7 | Class::MOP::Mixin::AttributeCore::
4 | 1 | 1 | 8µs | 8µs | reset_package_cache_flag | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 8µs | 19µs | BEGIN@471 | File::Find::Rule::
1 | 1 | 1 | 8µs | 19µs | BEGIN@108 | File::Temp::
1 | 1 | 1 | 8µs | 8µs | CORE:ftfile (opcode) | FindBin::
1 | 1 | 1 | 8µs | 14µs | BEGIN@5 | Moose::Meta::Role::Application::ToRole::
1 | 1 | 1 | 8µs | 186µs | BEGIN@13 | Moose::Meta::TypeConstraint::Enum::
1 | 1 | 1 | 8µs | 154µs | BEGIN@12 | Moose::Meta::TypeConstraint::Registry::
1 | 1 | 1 | 8µs | 136µs | BEGIN@36 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 8µs | 20µs | BEGIN@62 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 8µs | 13µs | BEGIN@5 | re::
1 | 1 | 1 | 8µs | 392µs | BEGIN@81 | Bio::DB::SeqI::
1 | 1 | 1 | 8µs | 581µs | BEGIN@101 | Bio::Location::Split::
1 | 1 | 1 | 8µs | 8µs | BEGIN@19 | Bio::Roary::GroupLabels::
1 | 1 | 1 | 8µs | 8µs | groups_filename | Bio::Roary::GroupLabels::
1 | 1 | 1 | 8µs | 15µs | meta | Bio::Roary::GroupLabels::
1 | 1 | 1 | 8µs | 506µs | BEGIN@133 | Bio::Seq::SeqBuilder::
1 | 1 | 1 | 8µs | 15µs | BEGIN@2 | Class::Load::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Class::MOP::Method::Meta::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Class::MOP::Mixin::HasAttributes::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Class::MOP::Mixin::HasMethods::
1 | 1 | 1 | 8µs | 28µs | BEGIN@260 | Error::Simple::
1 | 1 | 1 | 8µs | 8µs | __ANON__[(eval 131)[Eval/Closure.pm:125]:100] | Eval::Closure::Sandbox_106::
1 | 1 | 1 | 8µs | 8µs | __ANON__[(eval 316)[Eval/Closure.pm:125]:29] | Eval::Closure::Sandbox_215::
1 | 1 | 1 | 8µs | 19µs | BEGIN@51 | Exception::Class::Base::
1 | 1 | 1 | 8µs | 59µs | BEGIN@6 | Graph::AdjacencyMap::
1 | 1 | 1 | 8µs | 214µs | BEGIN@12 | Graph::AdjacencyMap::Heavy::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Moose::Meta::Method::Overridden::
1 | 1 | 1 | 8µs | 14µs | BEGIN@5 | Moose::Meta::Role::Application::ToClass::
4 | 1 | 1 | 8µs | 8µs | __ANON__[Moose/Meta/Role/Application.pm:16] | Moose::Meta::Role::Application::
1 | 1 | 1 | 8µs | 12µs | BEGIN@2 | Moose::Meta::TypeCoercion::
1 | 1 | 1 | 8µs | 164µs | BEGIN@11 | Moose::Meta::TypeConstraint::DuckType::
1 | 1 | 1 | 8µs | 22µs | BEGIN@8 | Moose::Meta::TypeConstraint::Enum::
1 | 1 | 1 | 8µs | 34µs | BEGIN@8 | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 8µs | 13µs | BEGIN@5 | Moose::Meta::TypeConstraint::Registry::
1 | 1 | 1 | 8µs | 32µs | BEGIN@12 | Moose::Meta::TypeConstraint::Union::
1 | 1 | 1 | 8µs | 588µs | BEGIN@6 | Moose::Meta::TypeConstraint::Union::
1 | 1 | 1 | 8µs | 33µs | BEGIN@5 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 8µs | 19µs | BEGIN@138 | AutoLoader::
1 | 1 | 1 | 8µs | 8µs | CORE:qr (opcode) | B::Deparse::
1 | 1 | 1 | 8µs | 36µs | BEGIN@3 | Bio::Root::RootI::
1 | 1 | 1 | 8µs | 1.65ms | BEGIN@464 | Bio::Seq::
1 | 1 | 1 | 8µs | 8µs | BEGIN@11 | Class::Load::XS::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Class::MOP::Method::
1 | 1 | 1 | 8µs | 12µs | BEGIN@8 | Devel::StackTrace::
1 | 1 | 1 | 8µs | 8µs | _cache_tmpdir | File::Spec::Unix::
1 | 1 | 1 | 8µs | 38µs | BEGIN@19 | Getopt::Long::
1 | 1 | 1 | 8µs | 21µs | BEGIN@99 | IO::Seekable::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Moose::Meta::Method::Meta::
1 | 1 | 1 | 8µs | 29µs | BEGIN@11 | Moose::Meta::Role::Application::ToInstance::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 8µs | 8µs | TIEHASH | Tie::StdHash::
1 | 1 | 1 | 8µs | 42µs | BEGIN@77 | Bio::LocationI::
1 | 1 | 1 | 8µs | 8µs | BEGIN@12 | Bio::Roary::ClustersRole::
2 | 2 | 1 | 8µs | 8µs | _output_inflate_unsplit_clusters_filename | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 8µs | 66µs | BEGIN@109 | Bio::SeqFeatureI::
1 | 1 | 1 | 8µs | 20µs | BEGIN@98 | Bio::SeqFeatureI::
1 | 1 | 1 | 8µs | 1.04ms | BEGIN@116 | Bio::SeqI::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Class::MOP::Mixin::
1 | 1 | 1 | 8µs | 36µs | BEGIN@171 | Cwd::
1 | 1 | 1 | 8µs | 8µs | __ANON__[(eval 142)[Eval/Closure.pm:125]:157] | Eval::Closure::Sandbox_117::
1 | 1 | 1 | 8µs | 8µs | __ANON__[(eval 303)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_202::
1 | 1 | 1 | 8µs | 17µs | BEGIN@138 | File::Temp::
1 | 1 | 1 | 8µs | 60µs | BEGIN@13 | Graph::AdjacencyMap::Vertex::
1 | 1 | 1 | 8µs | 19µs | BEGIN@24 | Graph::Attribute::
1 | 1 | 1 | 8µs | 35µs | BEGIN@7 | Moose::Meta::Mixin::AttributeCore::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Moose::Meta::Role::Application::ToInstance::
1 | 1 | 1 | 8µs | 32µs | BEGIN@8 | Moose::Meta::Role::Attribute::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Moose::Meta::TypeConstraint::DuckType::
1 | 1 | 1 | 8µs | 186µs | BEGIN@12 | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Moose::Meta::TypeConstraint::Role::
1 | 1 | 1 | 8µs | 8µs | CORE:match (opcode) | warnings::
1 | 1 | 1 | 8µs | 425µs | BEGIN@80 | Bio::Location::WidestCoordPolicy::
1 | 1 | 1 | 8µs | 14µs | meta | Bio::Roary::OrderGenes::
1 | 1 | 1 | 8µs | 8µs | BEGIN@21 | Bio::Roary::Output::EmblGroups::
1 | 1 | 1 | 8µs | 46µs | BEGIN@11 | Class::MOP::
8 | 1 | 1 | 8µs | 8µs | writer (xsub) | Class::MOP::Mixin::AttributeCore::
1 | 1 | 1 | 8µs | 8µs | _vstring (xsub) | Data::Dumper::
1 | 1 | 1 | 8µs | 8µs | __ANON__[(eval 598)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_428::
1 | 1 | 1 | 8µs | 20µs | BEGIN@3 | File::Find::
1 | 1 | 1 | 8µs | 18µs | BEGIN@268 | File::Find::Rule::
1 | 1 | 1 | 8µs | 18µs | BEGIN@49 | Graph::Attribute::
1 | 1 | 1 | 8µs | 13µs | BEGIN@5 | Moose::Meta::Method::Accessor::
1 | 1 | 1 | 8µs | 522µs | BEGIN@6 | Moose::Meta::Role::Application::RoleSummation::
1 | 1 | 1 | 8µs | 159µs | BEGIN@9 | Moose::Meta::Role::Application::ToClass::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Moose::Meta::Role::Attribute::
1 | 1 | 1 | 8µs | 619µs | BEGIN@6 | Moose::Meta::TypeCoercion::
1 | 1 | 1 | 8µs | 8µs | gff_files | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 8µs | 32µs | BEGIN@7 | Class::MOP::Mixin::
1 | 1 | 1 | 8µs | 11µs | BEGIN@5 | Class::MOP::Object::
1 | 1 | 1 | 8µs | 8µs | __ANON__[(eval 506)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_363::
1 | 1 | 1 | 8µs | 19µs | BEGIN@14 | Graph::AdjacencyMap::Light::
1 | 1 | 1 | 8µs | 19µs | BEGIN@227 | MRO::Compat::
1 | 1 | 1 | 8µs | 8µs | BEGIN@15 | Moose::Meta::Role::
1 | 1 | 1 | 8µs | 12µs | BEGIN@5 | Moose::Meta::Role::Method::
1 | 1 | 1 | 8µs | 547µs | BEGIN@6 | Moose::Meta::Role::Method::Required::
1 | 1 | 1 | 8µs | 167µs | BEGIN@12 | Moose::Meta::TypeCoercion::Union::
1 | 1 | 1 | 8µs | 29µs | BEGIN@11 | Moose::Meta::TypeConstraint::Enum::
1 | 1 | 1 | 8µs | 8µs | BEGIN@9 | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 8µs | 9µs | list_all_type_constraints | Moose::Util::TypeConstraints::
1 | 1 | 1 | 8µs | 8µs | BEGIN@13 | Package::Stash::XS::
1 | 1 | 1 | 8µs | 43µs | BEGIN@6 | Text::CSV::
1 | 1 | 1 | 8µs | 8µs | BEGIN@8 | metaclass::
1 | 1 | 1 | 8µs | 18µs | BEGIN@39 | B::Deparse::
1 | 1 | 1 | 8µs | 63µs | BEGIN@86 | Bio::AnnotatableI::
1 | 1 | 1 | 8µs | 8µs | BEGIN@24 | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 8µs | 8µs | BEGIN@21 | Bio::Roary::Output::GroupsMultifastaNucleotide::
1 | 1 | 1 | 8µs | 70µs | BEGIN@251 | Bio::Tools::GuessSeqFormat::
1 | 1 | 1 | 8µs | 34µs | BEGIN@4 | Class::Data::Inheritable::
1 | 1 | 1 | 8µs | 29µs | BEGIN@7 | Class::MOP::Object::
1 | 1 | 1 | 8µs | 11µs | BEGIN@4 | Devel::StackTrace::Frame::
1 | 1 | 1 | 8µs | 8µs | __ANON__[(eval 594)[Eval/Closure.pm:125]:15] | Eval::Closure::Sandbox_424::
1 | 1 | 1 | 8µs | 19µs | BEGIN@349 | File::Find::
1 | 1 | 1 | 8µs | 29µs | BEGIN@8 | File::Find::Rule::
1 | 1 | 1 | 8µs | 36µs | BEGIN@220 | File::Spec::Unix::
1 | 1 | 1 | 8µs | 35µs | BEGIN@15 | Graph::AdjacencyMap::Vertex::
2 | 1 | 1 | 8µs | 8µs | __ANON__[Graph/Attribute.pm:15] | Graph::Attribute::
1 | 1 | 1 | 8µs | 8µs | BEGIN@7 | Moose::Meta::Class::Immutable::Trait::
1 | 1 | 1 | 8µs | 36µs | BEGIN@7 | Moose::Meta::Method::Delegation::
1 | 1 | 1 | 8µs | 472µs | BEGIN@6 | Moose::Meta::Role::Application::ToClass::
1 | 1 | 1 | 8µs | 8µs | full_opset (xsub) | Opcode::
1 | 1 | 1 | 8µs | 19µs | BEGIN@137 | Text::CSV::
1 | 1 | 1 | 8µs | 17µs | BEGIN@186 | AutoLoader::
1 | 1 | 1 | 8µs | 60µs | BEGIN@68 | Bio::DB::RandomAccessI::
1 | 1 | 1 | 8µs | 56µs | BEGIN@98 | Bio::FeatureHolderI::
1 | 1 | 1 | 8µs | 8µs | BEGIN@20 | Bio::Roary::AnalyseGroups::
6 | 1 | 1 | 8µs | 8µs | CORE:match (opcode) | Carp::
1 | 1 | 1 | 8µs | 18µs | BEGIN@167 | Exception::Class::
1 | 1 | 1 | 8µs | 17µs | BEGIN@175 | Exception::Class::
1 | 1 | 1 | 8µs | 97µs | BEGIN@5 | File::Find::
1 | 1 | 1 | 8µs | 18µs | BEGIN@225 | File::Find::Rule::
1 | 1 | 1 | 8µs | 33µs | BEGIN@248 | File::Find::Rule::
1 | 1 | 1 | 8µs | 35µs | BEGIN@136 | File::Spec::Unix::
1 | 1 | 1 | 8µs | 46µs | BEGIN@26 | Getopt::Long::
1 | 1 | 1 | 8µs | 20µs | BEGIN@7 | IO::
1 | 1 | 1 | 8µs | 41µs | BEGIN@7 | Moose::Meta::Method::Accessor::
1 | 1 | 1 | 8µs | 35µs | BEGIN@9 | Moose::Meta::Method::
1 | 1 | 1 | 8µs | 41µs | BEGIN@7 | Moose::Meta::Method::Meta::
1 | 1 | 1 | 8µs | 495µs | BEGIN@6 | Moose::Meta::TypeConstraint::Parameterized::
1 | 1 | 1 | 7µs | 7µs | BEGIN@23 | Bio::Roary::GroupStatistics::
1 | 1 | 1 | 7µs | 37µs | BEGIN@7 | Class::MOP::Method::
1 | 1 | 1 | 7µs | 33µs | BEGIN@8 | Class::MOP::Method::Meta::
9 | 1 | 1 | 7µs | 7µs | clearer (xsub) | Class::MOP::Mixin::AttributeCore::
1 | 1 | 1 | 7µs | 29µs | BEGIN@9 | Class::MOP::Mixin::HasAttributes::
1 | 1 | 1 | 7µs | 7µs | __ANON__[(eval 41)[Eval/Closure.pm:125]:49] | Eval::Closure::Sandbox_17::
1 | 1 | 1 | 7µs | 7µs | __ANON__[(eval 397)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_271::
1 | 1 | 1 | 7µs | 20µs | BEGIN@50 | File::Basename::
1 | 1 | 1 | 7µs | 19µs | BEGIN@4 | File::Path::
1 | 1 | 1 | 7µs | 20µs | BEGIN@10 | File::Temp::
1 | 1 | 1 | 7µs | 32µs | BEGIN@91 | File::Temp::
1 | 1 | 1 | 7µs | 131µs | BEGIN@45 | Getopt::Long::
1 | 1 | 1 | 7µs | 11µs | BEGIN@5 | Moose::Meta::Method::
1 | 1 | 1 | 7µs | 33µs | BEGIN@12 | Moose::Meta::TypeConstraint::Class::
1 | 1 | 1 | 7µs | 28µs | BEGIN@10 | Moose::Meta::TypeConstraint::Registry::
1 | 1 | 1 | 7µs | 24µs | BEGIN@59 | Params::Util::
1 | 1 | 1 | 7µs | 21µs | BEGIN@114 | Text::CSV_PP::
1 | 1 | 1 | 7µs | 11µs | BEGIN@11 | mro::
1 | 1 | 1 | 7µs | 7µs | BEGIN@66 | Bio::DB::RandomAccessI::
1 | 1 | 1 | 7µs | 7µs | BEGIN@97 | Bio::Factory::FTLocationFactory::
1 | 1 | 1 | 7µs | 61µs | BEGIN@96 | Bio::RangeI::
1 | 1 | 1 | 7µs | 7µs | BEGIN@22 | Bio::Roary::Output::GroupsMultifastasNucleotide::
3 | 3 | 1 | 7µs | 7µs | __ANON__[Class/Data/Inheritable.pm:23] | Class::Data::Inheritable::
1 | 1 | 1 | 7µs | 14µs | add_before_modifier | Class::MOP::Method::Wrapped::
1 | 1 | 1 | 7µs | 63µs | BEGIN@19 | File::Path::
1 | 1 | 1 | 7µs | 36µs | cwd2 | FindBin::
1 | 1 | 1 | 7µs | 31µs | BEGIN@233 | Getopt::Long::
1 | 1 | 1 | 7µs | 18µs | BEGIN@258 | MRO::Compat::
1 | 1 | 1 | 7µs | 7µs | BEGIN@20 | Moose::Meta::Class::
1 | 1 | 1 | 7µs | 508µs | BEGIN@6 | Moose::Meta::TypeConstraint::Class::
1 | 1 | 1 | 7µs | 30µs | BEGIN@3 | Number::Compare::
3 | 2 | 1 | 7µs | 7µs | CORE:match (opcode) | Bio::Root::IO::
12 | 2 | 1 | 7µs | 7µs | downgrade (xsub) | utf8::
1 | 1 | 1 | 7µs | 7µs | __ANON__[(eval 475)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_332::
1 | 1 | 1 | 7µs | 7µs | __ANON__[(eval 57)[Eval/Closure.pm:125]:52] | Eval::Closure::Sandbox_33::
1 | 1 | 1 | 7µs | 7µs | __ANON__[(eval 592)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_422::
1 | 1 | 1 | 7µs | 7µs | CORE:ftdir (opcode) | File::Spec::Unix::
1 | 1 | 1 | 7µs | 30µs | BEGIN@236 | Getopt::Long::
1 | 1 | 1 | 7µs | 7µs | BEGIN@6 | Graph::TransitiveClosure::Matrix::
1 | 1 | 1 | 7µs | 33µs | BEGIN@22 | Moose::Meta::Class::
1 | 1 | 1 | 7µs | 476µs | BEGIN@6 | Moose::Meta::Role::Application::ToRole::
1 | 1 | 1 | 7µs | 435µs | BEGIN@6 | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 7µs | 459µs | BEGIN@6 | Moose::Meta::TypeConstraint::Role::
6 | 1 | 1 | 7µs | 7µs | _ARRAYLIKE (xsub) | Params::Util::
1 | 1 | 1 | 7µs | 7µs | BEGIN@146 | Bio::SeqFeature::Generic::
1 | 1 | 1 | 7µs | 20µs | BEGIN@7 | Devel::StackTrace::
1 | 1 | 1 | 7µs | 7µs | TIEHASH | Errno::
1 | 1 | 1 | 7µs | 7µs | __ANON__[(eval 48)[Eval/Closure.pm:125]:55] | Eval::Closure::Sandbox_24::
1 | 1 | 1 | 7µs | 27µs | BEGIN@22 | Getopt::Long::
1 | 1 | 1 | 7µs | 34µs | BEGIN@248 | Getopt::Long::
1 | 1 | 1 | 7µs | 11µs | BEGIN@2 | Moose::
1 | 1 | 1 | 7µs | 37µs | BEGIN@9 | Moose::Meta::Method::Delegation::
1 | 1 | 1 | 7µs | 11µs | BEGIN@5 | Moose::Meta::Role::Method::Required::
1 | 1 | 1 | 7µs | 13µs | meta | Moose::Meta::TypeCoercion::Union::
1 | 1 | 1 | 7µs | 7µs | groups_filename | Bio::Roary::AnnotateGroups::
1 | 1 | 1 | 7µs | 16µs | BEGIN@8 | Devel::StackTrace::Frame::
1 | 1 | 1 | 7µs | 17µs | BEGIN@78 | Exception::Class::
1 | 1 | 1 | 7µs | 16µs | BEGIN@4 | Exporter::Heavy::
1 | 1 | 1 | 7µs | 32µs | BEGIN@87 | File::Temp::
1 | 1 | 1 | 7µs | 34µs | BEGIN@231 | Getopt::Long::
1 | 1 | 1 | 7µs | 79µs | BEGIN@51 | Getopt::Long::
1 | 1 | 1 | 7µs | 66µs | BEGIN@65 | Params::Util::
1 | 1 | 1 | 7µs | 7µs | BEGIN@35 | Safe::
1 | 1 | 1 | 7µs | 7µs | BEGIN@11 | Bio::Roary::ParseGFFAnnotationRole::
1 | 1 | 1 | 7µs | 7µs | core_accessory_ordering_key | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 7µs | 7µs | __ANON__[(eval 302)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_201::
1 | 1 | 1 | 7µs | 7µs | __ANON__[(eval 490)[Eval/Closure.pm:125]:15] | Eval::Closure::Sandbox_347::
1 | 1 | 1 | 7µs | 33µs | BEGIN@229 | Getopt::Long::
1 | 1 | 1 | 7µs | 216µs | BEGIN@12 | Graph::AdjacencyMap::Vertex::
1 | 1 | 1 | 7µs | 10µs | BEGIN@5 | Moose::Meta::TypeCoercion::Union::
2 | 2 | 2 | 7µs | 7µs | import | bytes::
2 | 1 | 1 | 7µs | 7µs | CORE:substcont (opcode) | AutoLoader::
1 | 1 | 1 | 7µs | 7µs | BEGIN@23 | Bio::Roary::Output::EmblGroups::
1 | 1 | 1 | 7µs | 28µs | BEGIN@8 | Class::MOP::Object::
1 | 1 | 1 | 7µs | 7µs | __ANON__[(eval 449)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_306::
1 | 1 | 1 | 7µs | 7µs | __ANON__[(eval 460)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_317::
2 | 2 | 1 | 7µs | 7µs | CORE:stat (opcode) | File::Path::
1 | 1 | 1 | 7µs | 31µs | BEGIN@145 | File::Spec::Unix::
1 | 1 | 1 | 7µs | 25µs | BEGIN@4 | File::Spec::Unix::
1 | 1 | 1 | 7µs | 503µs | BEGIN@6 | Moose::Meta::Role::Application::ToInstance::
1 | 1 | 1 | 7µs | 16µs | BEGIN@119 | Text::CSV_PP::
2 | 2 | 1 | 7µs | 7µs | import | if::
1 | 1 | 1 | 7µs | 47µs | BEGIN@299 | Error::subs::
1 | 1 | 1 | 7µs | 28µs | BEGIN@240 | Getopt::Long::
1 | 1 | 1 | 7µs | 7µs | BEGIN@7 | Moose::Meta::Method::
1 | 1 | 1 | 7µs | 11µs | meta | Moose::Meta::Role::Application::ToRole::
1 | 1 | 1 | 7µs | 434µs | BEGIN@6 | Moose::Meta::TypeConstraint::Enum::
1 | 1 | 1 | 7µs | 7µs | CORE:match (opcode) | Sub::Exporter::
6 | 1 | 1 | 7µs | 7µs | associated_metaclass (xsub) | Class::MOP::Instance::
1 | 1 | 1 | 7µs | 28µs | BEGIN@239 | Getopt::Long::
1 | 1 | 1 | 7µs | 7µs | BEGIN@11 | Moose::Meta::Role::Application::RoleSummation::
1 | 1 | 1 | 7µs | 7µs | BEGIN@17 | Moose::Meta::Role::
13 | 1 | 1 | 7µs | 7µs | CORE:match (opcode) | Moose::Meta::Role::
1 | 1 | 1 | 7µs | 477µs | BEGIN@6 | Moose::Meta::TypeConstraint::DuckType::
1 | 1 | 1 | 7µs | 24µs | BEGIN@4 | Number::Compare::
2 | 2 | 1 | 7µs | 7µs | cdhit_groups_filename | Bio::Roary::InflateClusters::
1 | 1 | 1 | 6µs | 6µs | BEGIN@20 | Bio::Roary::OrderGenes::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 135)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_110::
1 | 1 | 1 | 6µs | 24µs | export_tags | Exporter::
1 | 1 | 1 | 6µs | 6µs | BEGIN@85 | FindBin::
1 | 1 | 1 | 6µs | 462µs | BEGIN@6 | Moose::Meta::TypeConstraint::Registry::
1 | 1 | 1 | 6µs | 6µs | BEGIN@24 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 6µs | 6µs | __ANON__[lib/Bio/Roary/Output/NumberOfGroups.pm:34] | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 300)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_199::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 489)[Eval/Closure.pm:125]:8] | Eval::Closure::Sandbox_346::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 67)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_43::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 116)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_91::
1 | 1 | 1 | 6µs | 6µs | _cached_tmpdir | File::Spec::Unix::
1 | 1 | 1 | 6µs | 29µs | BEGIN@96 | File::Temp::
1 | 1 | 1 | 6µs | 31µs | BEGIN@235 | Getopt::Long::
1 | 1 | 1 | 6µs | 6µs | BEGIN@17 | Moose::Role::
1 | 1 | 1 | 6µs | 6µs | BEGIN@27 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 6µs | 6µs | BEGIN@98 | Bio::Factory::FTLocationFactory::
1 | 1 | 1 | 6µs | 6µs | BEGIN@22 | Bio::Roary::Output::GroupsMultifastaNucleotide::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 314)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_213::
1 | 1 | 1 | 6µs | 6µs | BEGIN@5 | File::Find::Rule::
1 | 1 | 1 | 6µs | 29µs | BEGIN@95 | File::Temp::
1 | 1 | 1 | 6µs | 29µs | BEGIN@258 | Getopt::Long::
1 | 1 | 1 | 6µs | 6µs | BEGIN@120 | Module::Runtime::
1 | 1 | 1 | 6µs | 28µs | BEGIN@237 | Getopt::Long::
1 | 1 | 1 | 6µs | 413µs | BEGIN@6 | Moose::Meta::TypeCoercion::Union::
1 | 1 | 1 | 6µs | 6µs | BEGIN@34 | Safe::
1 | 1 | 1 | 6µs | 6µs | BEGIN@20 | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 528)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_385::
1 | 1 | 1 | 6µs | 6µs | BEGIN@9 | File::Grep::
1 | 1 | 1 | 6µs | 28µs | BEGIN@247 | Getopt::Long::
4 | 1 | 1 | 6µs | 6µs | check_required_attributes | Moose::Meta::Role::Application::ToClass::
1 | 1 | 1 | 6µs | 6µs | BEGIN@12 | Opcode::
1 | 1 | 1 | 6µs | 6µs | CORE:match (opcode) | Text::CSV::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 27)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_3::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 107)[Eval/Closure.pm:125]:46] | Eval::Closure::Sandbox_82::
1 | 1 | 1 | 6µs | 22µs | heavy_export_tags | Exporter::Heavy::
1 | 1 | 1 | 6µs | 6µs | BEGIN@9 | Moose::Meta::TypeCoercion::
1 | 1 | 1 | 6µs | 6µs | _setup | Sub::Exporter::
1 | 1 | 1 | 6µs | 6µs | BEGIN@7 | Sub::Install::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 125)[Eval/Closure.pm:125]:139] | Eval::Closure::Sandbox_100::
3 | 3 | 1 | 6µs | 6µs | CORE:match (opcode) | Eval::Closure::Sandbox_352::
1 | 1 | 1 | 6µs | 28µs | BEGIN@97 | File::Temp::
1 | 1 | 1 | 6µs | 6µs | unlink_on_destroy | File::Temp::Dir::
1 | 1 | 1 | 6µs | 6µs | BEGIN@19 | Moose::
2 | 1 | 1 | 6µs | 6µs | CORE:subst (opcode) | if::
1 | 1 | 1 | 6µs | 6µs | CORE:qr (opcode) | Bio::Factory::FTLocationFactory::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 171)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_146::
1 | 1 | 1 | 6µs | 6µs | BEGIN@10 | Moose::Meta::Role::
3 | 1 | 1 | 6µs | 6µs | __ANON__[Moose/Meta/Role.pm:351] | Moose::Meta::Role::
1 | 1 | 1 | 6µs | 6µs | BEGIN@6 | Moose::Role::
1 | 1 | 1 | 6µs | 6µs | BEGIN@13 | Moose::Util::
1 | 1 | 1 | 6µs | 6µs | BEGIN@10 | Sub::Exporter::
3 | 1 | 1 | 6µs | 6µs | __ANON__[Moose/Meta/TypeConstraint.pm:36] | Moose::Meta::TypeConstraint::
1 | 1 | 1 | 6µs | 6µs | CORE:sort (opcode) | Bio::SeqUtils::
1 | 1 | 1 | 6µs | 6µs | BEGIN@11 | Devel::StackTrace::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 148)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_123::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 301)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_200::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 461)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_318::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 595)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_425::
1 | 1 | 1 | 6µs | 6µs | BEGIN@33 | Moose::Util::TypeConstraints::
1 | 1 | 1 | 6µs | 6µs | BEGIN@13 | Class::MOP::Mixin::HasOverloads::
8 | 1 | 1 | 6µs | 6µs | __ANON__ (xsub) | Class::MOP::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 441)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_298::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 60)[Eval/Closure.pm:125]:55] | Eval::Closure::Sandbox_36::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 593)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_423::
1 | 1 | 1 | 6µs | 6µs | CORE:match (opcode) | Eval::Closure::Sandbox_433::
1 | 1 | 1 | 6µs | 6µs | O_NOFOLLOW (xsub) | Fcntl::
1 | 1 | 1 | 6µs | 6µs | BEGIN@105 | Bio::SeqFeatureI::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 319)[Eval/Closure.pm:125]:29] | Eval::Closure::Sandbox_218::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 453)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_310::
1 | 1 | 1 | 6µs | 6µs | __ANON__[(eval 596)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_426::
1 | 1 | 1 | 6µs | 6µs | ConfigDefaults | Getopt::Long::
2 | 1 | 1 | 6µs | 6µs | constraint_generator | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 5µs | 5µs | iupac_iub | Bio::Tools::IUPAC::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 62)[Eval/Closure.pm:125]:52] | Eval::Closure::Sandbox_38::
1 | 1 | 1 | 5µs | 5µs | Configure | Getopt::Long::
3 | 1 | 1 | 5µs | 5µs | __ANON__[Moose/Meta/Role.pm:398] | Moose::Meta::Role::
1 | 1 | 1 | 5µs | 5µs | BEGIN@99 | Bio::Factory::FTLocationFactory::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 307)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_206::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 350)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_233::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 478)[Eval/Closure.pm:125]:8] | Eval::Closure::Sandbox_335::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 597)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_427::
1 | 1 | 1 | 5µs | 5µs | BEGIN@5 | List::MoreUtils::
1 | 1 | 1 | 5µs | 5µs | BEGIN@6 | List::MoreUtils::
1 | 1 | 1 | 5µs | 5µs | implementation_for | Module::Implementation::
1 | 1 | 1 | 5µs | 5µs | BEGIN@296 | Module::Runtime::
1 | 1 | 1 | 5µs | 5µs | BEGIN@8 | Sub::Exporter::Progressive::
1 | 1 | 1 | 5µs | 5µs | BEGIN@461 | Bio::Seq::
12 | 2 | 1 | 5µs | 5µs | CORE:subst (opcode) | Carp::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 519)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_376::
2 | 1 | 1 | 5µs | 5µs | _set_constraint | Moose::Meta::TypeConstraint::
3 | 1 | 1 | 5µs | 5µs | _HASH0 (xsub) | Params::Util::
1 | 1 | 1 | 5µs | 5µs | BEGIN@7 | Class::MOP::Overload::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 138)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_113::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 313)[Eval/Closure.pm:125]:29] | Eval::Closure::Sandbox_212::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 417)[Eval/Closure.pm:125]:29] | Eval::Closure::Sandbox_291::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 108)[Eval/Closure.pm:125]:40] | Eval::Closure::Sandbox_83::
1 | 1 | 1 | 5µs | 5µs | BEGIN@10 | Moose::Meta::Attribute::
1 | 1 | 1 | 5µs | 5µs | BEGIN@9 | Sub::Exporter::Progressive::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 379)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_253::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 55)[Eval/Closure.pm:125]:52] | Eval::Closure::Sandbox_31::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 603)[Eval/Closure.pm:125]:21] | Eval::Closure::Sandbox_433::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 94)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_69::
3 | 3 | 1 | 5µs | 5µs | CORE:qr (opcode) | constant::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 206)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_175::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 446)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_303::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 508)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_365::
3 | 1 | 1 | 5µs | 5µs | _meta_method_class | Moose::Meta::Role::
1 | 1 | 1 | 5µs | 5µs | BEGIN@7 | Moose::Role::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 213)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_182::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 317)[Eval/Closure.pm:125]:29] | Eval::Closure::Sandbox_216::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 442)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_299::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 523)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_380::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 524)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_381::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 601)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_431::
1 | 1 | 1 | 5µs | 5µs | mcl_filename | Bio::Roary::InflateClusters::
1 | 1 | 1 | 5µs | 5µs | _output_mcl_filename | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 5µs | 5µs | dont_split_groups | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 5µs | 5µs | BEGIN@16 | Devel::OverloadInfo::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 186)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_155::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 448)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_305::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 457)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_314::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 463)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_320::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 527)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_384::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 577)[Eval/Closure.pm:125]:29] | Eval::Closure::Sandbox_407::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 109)[Eval/Closure.pm:125]:28] | Eval::Closure::Sandbox_84::
1 | 1 | 1 | 5µs | 5µs | catpath | File::Spec::Unix::
1 | 1 | 1 | 5µs | 5µs | CORE:ftis (opcode) | File::Temp::
6 | 1 | 1 | 5µs | 5µs | CORE:match (opcode) | overload::
1 | 1 | 1 | 5µs | 5µs | BEGIN@15 | Bio::Roary::Main::RoaryPostAnalysis::
1 | 1 | 1 | 5µs | 5µs | clusters_filename | Bio::Roary::PostAnalysis::
2 | 1 | 1 | 5µs | 5µs | detach_from_class | Class::MOP::Method::
1 | 1 | 1 | 5µs | 5µs | BEGIN@298 | Error::subs::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 199)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_168::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 297)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_196::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 318)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_217::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 342)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_225::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 371)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_245::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 385)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_259::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 387)[Eval/Closure.pm:125]:39] | Eval::Closure::Sandbox_261::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 399)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_273::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 414)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_288::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 415)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_289::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 447)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_304::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 499)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_356::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 500)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_357::
1 | 1 | 1 | 5µs | 5µs | __ANON__[(eval 564)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_394::
2 | 2 | 1 | 5µs | 5µs | CORE:qr (opcode) | File::Find::
1 | 1 | 1 | 5µs | 5µs | BEGIN@7 | Moose::Meta::Method::Destructor::
1 | 1 | 1 | 4µs | 4µs | help | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 4µs | 4µs | _input_cd_hit_groups_file | Bio::Roary::PostAnalysis::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 130)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_105::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 202)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_171::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 43)[Eval/Closure.pm:125]:55] | Eval::Closure::Sandbox_19::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 315)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_214::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 343)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_226::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 378)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_252::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 386)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_260::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 413)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_287::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 416)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_290::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 445)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_302::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 459)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_316::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 483)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_340::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 501)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_358::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 565)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_395::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 574)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_404::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 575)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_405::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 588)[Eval/Closure.pm:125]:15] | Eval::Closure::Sandbox_418::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 589)[Eval/Closure.pm:125]:15] | Eval::Closure::Sandbox_419::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 591)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_421::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 115)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_90::
2 | 1 | 1 | 4µs | 4µs | safe_level | File::Temp::
1 | 1 | 1 | 4µs | 4µs | BEGIN@7 | Moose::Meta::Class::
1 | 1 | 1 | 4µs | 4µs | BEGIN@7 | Moose::Meta::Role::Application::
1 | 1 | 1 | 4µs | 4µs | BEGIN@13 | Moose::Meta::TypeConstraint::DuckType::
2 | 2 | 2 | 4µs | 4µs | import | integer::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 129)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_104::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 146)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_121::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 205)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_174::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 214)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_183::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 217)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_186::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 220)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_189::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 296)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_195::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 309)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_208::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 311)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_210::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 353)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_236::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 375)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_249::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 390)[Eval/Closure.pm:125]:21] | Eval::Closure::Sandbox_264::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 401)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_275::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 406)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_280::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 418)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_292::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 458)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_315::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 480)[Eval/Closure.pm:125]:29] | Eval::Closure::Sandbox_337::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 507)[Eval/Closure.pm:125]:21] | Eval::Closure::Sandbox_364::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 520)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_377::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 525)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_382::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 566)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_396::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 569)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_399::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 585)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_415::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 599)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_429::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 602)[Eval/Closure.pm:125]:21] | Eval::Closure::Sandbox_432::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 89)[Eval/Closure.pm:125]:11] | Eval::Closure::Sandbox_65::
1 | 1 | 1 | 4µs | 4µs | BEGIN@8 | File::Path::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 201)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_170::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 208)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_177::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 306)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_205::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 310)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_209::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 344)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_227::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 351)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_234::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 352)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_235::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 354)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_237::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 374)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_248::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 383)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_257::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 384)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_258::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 392)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_266::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 400)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_274::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 420)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_294::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 53)[Eval/Closure.pm:125]:55] | Eval::Closure::Sandbox_29::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 462)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_319::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 464)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_321::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 473)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_330::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 479)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_336::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 494)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_351::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 502)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_359::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 503)[Eval/Closure.pm:125]:18] | Eval::Closure::Sandbox_360::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 509)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_366::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 510)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_367::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 511)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_368::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 512)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_369::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 514)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_371::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 521)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_378::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 522)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_379::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 526)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_383::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 567)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_397::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 571)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_401::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 590)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_420::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 600)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_430::
1 | 1 | 1 | 4µs | 4µs | BEGIN@47 | File::Copy::
2 | 1 | 1 | 4µs | 4µs | get_all_parameterizable_types | Moose::Util::TypeConstraints::
1 | 1 | 1 | 4µs | 4µs | _error_message | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 4µs | 4µs | CORE:regcomp (opcode) | Cwd::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 136)[Eval/Closure.pm:125]:19] | Eval::Closure::Sandbox_111::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 151)[Eval/Closure.pm:125]:25] | Eval::Closure::Sandbox_126::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 189)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_158::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 190)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_159::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 204)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_173::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 207)[Eval/Closure.pm:125]:15] | Eval::Closure::Sandbox_176::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 346)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_229::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 347)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_230::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 370)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_244::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 396)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_270::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 402)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_276::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 450)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_307::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 451)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_308::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 456)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_313::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 465)[Eval/Closure.pm:125]:26] | Eval::Closure::Sandbox_322::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 484)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_341::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 493)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_350::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 497)[Eval/Closure.pm:125]:18] | Eval::Closure::Sandbox_354::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 513)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_370::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 515)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_372::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 517)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_374::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 572)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_402::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 573)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_403::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 576)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_406::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 586)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_416::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 153)[Eval/Closure.pm:125]:31] | Eval::Closure::Sandbox_128::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 188)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_157::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 216)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_185::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 308)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_207::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 403)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_277::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 405)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_279::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 419)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_293::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 474)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_331::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 498)[Eval/Closure.pm:125]:18] | Eval::Closure::Sandbox_355::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 504)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_361::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 505)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_362::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 516)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_373::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 568)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_398::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 570)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_400::
1 | 1 | 1 | 4µs | 4µs | BEGIN@9 | Moose::Meta::TypeConstraint::Enum::
2 | 1 | 1 | 4µs | 4µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:157] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 4µs | 4µs | CORE:match (opcode) | Safe::
1 | 1 | 1 | 4µs | 4µs | verbose_stats | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 4µs | 4µs | BEGIN@209 | Cwd::
1 | 1 | 1 | 4µs | 4µs | BEGIN@46 | Error::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 191)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_160::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 194)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_163::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 200)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_169::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 215)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_184::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 324)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_223::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 372)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_246::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 382)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_256::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 404)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_278::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 470)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_327::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 471)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_328::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 476)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_333::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 487)[Eval/Closure.pm:125]:22] | Eval::Closure::Sandbox_344::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 518)[Eval/Closure.pm:125]:13] | Eval::Closure::Sandbox_375::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 579)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_409::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 584)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_414::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 587)[Eval/Closure.pm:125]:15] | Eval::Closure::Sandbox_417::
1 | 1 | 1 | 4µs | 4µs | O_BINARY (xsub) | Fcntl::
1 | 1 | 1 | 4µs | 112µs | __ANON__[Sub/Exporter.pm:460] | Sub::Exporter::
1 | 1 | 1 | 4µs | 4µs | output_raw_filename_new_genes | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 4µs | 4µs | CORE:ftis (opcode) | Bio::Roary::SplitGroups::
2 | 1 | 1 | 4µs | 4µs | detach_from_class | Class::MOP::Attribute::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 145)[Eval/Closure.pm:125]:25] | Eval::Closure::Sandbox_120::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 150)[Eval/Closure.pm:125]:31] | Eval::Closure::Sandbox_125::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 187)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_156::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 203)[Eval/Closure.pm:125]:15] | Eval::Closure::Sandbox_172::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 356)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_239::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 373)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_247::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 395)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_269::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 398)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_272::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 100)[Eval/Closure.pm:125]:25] | Eval::Closure::Sandbox_75::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 104)[Eval/Closure.pm:125]:27] | Eval::Closure::Sandbox_79::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 110)[Eval/Closure.pm:125]:28] | Eval::Closure::Sandbox_85::
1 | 1 | 1 | 4µs | 4µs | CORE:match (opcode) | File::Temp::
1 | 1 | 1 | 4µs | 4µs | BEGIN@10 | Moose::Object::
1 | 1 | 1 | 4µs | 4µs | dont_split_groups | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 4µs | 4µs | output_file | Bio::Roary::InflateClusters::
1 | 1 | 1 | 4µs | 4µs | BEGIN@85 | Bio::Root::RootI::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 147)[Eval/Closure.pm:125]:31] | Eval::Closure::Sandbox_122::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 472)[Eval/Closure.pm:125]:12] | Eval::Closure::Sandbox_329::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 102)[Eval/Closure.pm:125]:11] | Eval::Closure::Sandbox_77::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 105)[Eval/Closure.pm:125]:27] | Eval::Closure::Sandbox_80::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 106)[Eval/Closure.pm:125]:28] | Eval::Closure::Sandbox_81::
1 | 1 | 1 | 4µs | 4µs | CORE:match (opcode) | File::Grep::
1 | 1 | 1 | 4µs | 4µs | BEGIN@13 | Moose::Role::
1 | 1 | 1 | 4µs | 4µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:146] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 132)[Eval/Closure.pm:125]:28] | Eval::Closure::Sandbox_107::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 25)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_1::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 320)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_219::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 388)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_262::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 477)[Eval/Closure.pm:125]:8] | Eval::Closure::Sandbox_334::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 481)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_338::
1 | 1 | 1 | 4µs | 4µs | CORE:match (opcode) | Eval::Closure::Sandbox_426::
1 | 1 | 1 | 4µs | 4µs | BEGIN@10 | File::Path::
1 | 1 | 1 | 4µs | 4µs | CORE:qr (opcode) | Moose::Deprecated::
1 | 1 | 1 | 4µs | 4µs | args | Bio::Roary::CommandLine::RoaryPostAnalysis::
1 | 1 | 1 | 4µs | 4µs | BEGIN@14 | Eval::Closure::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 389)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_263::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 394)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_268::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 482)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_339::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 529)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_386::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 578)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_408::
1 | 1 | 1 | 4µs | 4µs | BEGIN@101 | IO::Seekable::
1 | 1 | 1 | 4µs | 4µs | clusters_filename | Bio::Roary::InflateClusters::
1 | 1 | 1 | 4µs | 4µs | BEGIN@4 | Data::OptList::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 134)[Eval/Closure.pm:125]:16] | Eval::Closure::Sandbox_109::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 221)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_190::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 321)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_220::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 59)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_35::
1 | 1 | 1 | 4µs | 4µs | __ANON__[(eval 71)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_47::
1 | 1 | 1 | 4µs | 4µs | BEGIN@9 | Moose::Meta::TypeConstraint::Role::
1 | 1 | 1 | 4µs | 4µs | BEGIN@7 | Moose::Object::
1 | 1 | 1 | 4µs | 4µs | BEGIN@8 | Text::CSV::
1 | 1 | 1 | 3µs | 3µs | output_filename | Bio::Roary::GroupLabels::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 96)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_71::
1 | 1 | 1 | 3µs | 3µs | BEGIN@10 | Moose::Meta::TypeConstraint::Class::
1 | 1 | 1 | 3µs | 3µs | BEGIN@9 | Moose::Meta::TypeConstraint::Class::
1 | 1 | 1 | 3µs | 3µs | import | Text::CSV::
1 | 1 | 1 | 3µs | 3µs | _tmp_dir | Bio::Roary::SplitGroups::
1 | 1 | 1 | 3µs | 3µs | BEGIN@9 | Data::OptList::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 140)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_115::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 357)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_240::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 408)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_282::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 26)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_2::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 485)[Eval/Closure.pm:125]:8] | Eval::Closure::Sandbox_342::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 486)[Eval/Closure.pm:125]:8] | Eval::Closure::Sandbox_343::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 488)[Eval/Closure.pm:125]:8] | Eval::Closure::Sandbox_345::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 63)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_39::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 28)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_4::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 98)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_73::
1 | 1 | 1 | 3µs | 3µs | BEGIN@13 | Exception::Class::
2 | 1 | 1 | 3µs | 3µs | CORE:match (opcode) | File::Spec::Unix::
1 | 1 | 1 | 3µs | 3µs | BEGIN@13 | File::Temp::
1 | 1 | 1 | 3µs | 3µs | BEGIN@5 | Graph::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 141)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_116::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 37)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_13::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 56)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_32::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 64)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_40::
1 | 1 | 1 | 3µs | 3µs | CORE:match (opcode) | Eval::Closure::Sandbox_431::
1 | 1 | 1 | 3µs | 3µs | BEGIN@10 | Moose::Meta::TypeConstraint::Parameterizable::
1 | 1 | 1 | 3µs | 3µs | BEGIN@13 | Moose::Object::
1 | 1 | 1 | 3µs | 3µs | BEGIN@11 | Moose::Object::
1 | 1 | 1 | 3µs | 3µs | BEGIN@8 | Moose::Object::
1 | 1 | 1 | 3µs | 3µs | BEGIN@5 | Text::CSV::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 137)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_112::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 154)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_129::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 222)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_191::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 359)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_242::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 360)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_243::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 61)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_37::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 97)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_72::
1 | 1 | 1 | 3µs | 3µs | BEGIN@10 | Moose::Meta::TypeConstraint::Role::
1 | 1 | 1 | 3µs | 3µs | BEGIN@12 | Text::CSV_PP::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 144)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_119::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 35)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_11::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 173)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_148::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 196)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_165::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 223)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_192::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 49)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_25::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 454)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_311::
1 | 1 | 1 | 3µs | 3µs | CORE:match (opcode) | Eval::Closure::Sandbox_432::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 91)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_66::
1 | 1 | 1 | 3µs | 3µs | BEGIN@9 | Moose::Object::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 126)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_101::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 133)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_108::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 143)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_118::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 219)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_188::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 42)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_18::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 409)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_283::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 410)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_284::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 54)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_30::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 65)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_41::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 29)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_5::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 103)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_78::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 32)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_8::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 117)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_92::
1 | 1 | 1 | 3µs | 3µs | BEGIN@18 | File::Path::
9 | 1 | 1 | 3µs | 3µs | CORE:ftdir (opcode) | File::Path::
1 | 1 | 1 | 3µs | 3µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:119] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 3µs | 3µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:189] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 139)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_114::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 149)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_124::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 152)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_127::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 36)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_12::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 155)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_130::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 157)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_132::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 159)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_134::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 160)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_135::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 38)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_14::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 193)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_162::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 393)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_267::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 422)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_296::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 467)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_324::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 496)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_353::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 605)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_435::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 111)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_86::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 112)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_87::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 34)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_10::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 163)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_138::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 166)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_141::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 169)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_144::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 170)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_145::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 177)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_151::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 39)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_15::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 210)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_179::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 294)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_193::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 298)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_197::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 323)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_222::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 358)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_241::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 381)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_255::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 560)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_390::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 75)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_51::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 77)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_53::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 84)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_60::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 30)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_6::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 95)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_70::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 114)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_89::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 118)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_93::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 120)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_95::
1 | 1 | 1 | 3µs | 3µs | __ANON__[(eval 124)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_99::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 127)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_102::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 128)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_103::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 161)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_136::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 162)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_137::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 167)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_142::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 299)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_198::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 305)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_204::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 345)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_228::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 50)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_26::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 411)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_285::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 443)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_300::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 444)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_301::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 532)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_389::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 581)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_411::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 66)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_42::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 81)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_57::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 31)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_7::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 113)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_88::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 119)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_94::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 121)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_96::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 122)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_97::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 123)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_98::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 33)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_9::
1 | 1 | 1 | 2µs | 2µs | CORE:ftdir (opcode) | File::Temp::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 156)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_131::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 174)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_149::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 178)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_152::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 184)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_153::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 197)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_166::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 40)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_16::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 211)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_180::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 348)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_231::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 376)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_250::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 51)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_27::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 491)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_348::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 58)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_34::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 561)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_391::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 101)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_76::
2 | 1 | 1 | 2µs | 2µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:22] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 2µs | 2µs | CORE:pack (opcode) | B::Deparse::
1 | 1 | 1 | 2µs | 2µs | __ANON__[lib/Bio/Roary/Output/NumberOfGroups.pm:33] | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 164)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_139::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 165)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_140::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 168)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_143::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 175)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_150::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 212)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_181::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 295)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_194::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 44)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_20::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 45)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_21::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 325)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_224::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 46)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_22::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 349)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_232::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 377)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_251::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 412)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_286::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 455)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_312::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 468)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_325::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 492)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_349::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 562)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_392::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 563)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_393::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 582)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_412::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 68)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_44::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 73)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_49::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 92)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_67::
2 | 1 | 1 | 2µs | 2µs | CORE:subst (opcode) | Exception::Class::
1 | 1 | 1 | 2µs | 2µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:131] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 2µs | 2µs | threadsv_names (xsub) | B::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 158)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_133::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 185)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_154::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 198)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_167::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 47)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_23::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 52)[Eval/Closure.pm:125]:6] | Eval::Closure::Sandbox_28::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 469)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_326::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 69)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_45::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 72)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_48::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 76)[Eval/Closure.pm:125]:9] | Eval::Closure::Sandbox_52::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 78)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_54::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 79)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_55::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 82)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_58::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 85)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_61::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 86)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_62::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 87)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_63::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 88)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_64::
1 | 1 | 1 | 2µs | 2µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:151] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 583)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_413::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 70)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_46::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 74)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_50::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 80)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_56::
1 | 1 | 1 | 2µs | 2µs | __ANON__[(eval 83)[Eval/Closure.pm:125]:4] | Eval::Closure::Sandbox_59::
1 | 1 | 1 | 2µs | 2µs | __ANON__[Moose/Meta/TypeConstraint/Registry.pm:23] | Moose::Meta::TypeConstraint::Registry::
1 | 1 | 1 | 2µs | 2µs | __ANON__[lib/Bio/Roary/Output/NumberOfGroups.pm:32] | Bio::Roary::Output::NumberOfGroups::
1 | 1 | 1 | 2µs | 2µs | CORE:subst (opcode) | File::Path::
2 | 1 | 1 | 2µs | 2µs | __ANON__[File/Temp.pm:112] | File::Temp::
1 | 1 | 1 | 2µs | 2µs | rootdir | File::Spec::Unix::
1 | 1 | 1 | 2µs | 2µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:126] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 2µs | 2µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:66] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 2µs | 2µs | __ANON__[AutoLoader.pm:31] | AutoLoader::
1 | 1 | 1 | 2µs | 2µs | CORE:sort (opcode) | File::Temp::
1 | 1 | 1 | 2µs | 2µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:285] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 2µs | 2µs | upgrade (xsub) | utf8::
1 | 1 | 1 | 2µs | 2µs | __ANON__[Moose/Util/TypeConstraints/Builtins.pm:33] | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 1µs | 1µs | type | Moose::Util::TypeConstraints::Builtins::
1 | 1 | 1 | 1µs | 1µs | CORE:ftewrite (opcode) | File::Spec::Unix::
1 | 1 | 1 | 900ns | 900ns | is_stub (xsub) | Class::MOP::Method::
1 | 1 | 1 | 900ns | 900ns | __ANON__[File/Temp.pm:142] | File::Temp::
1 | 1 | 1 | 700ns | 700ns | O_EXLOCK (xsub) | Fcntl::
1 | 1 | 1 | 700ns | 700ns | CORE:subst (opcode) | Sub::Exporter::Progressive::
1 | 1 | 1 | 600ns | 600ns | CORE:match (opcode) | Cwd::