NAME Bio::Minimizer - minimizer package Based on the ideas put forth by Roberts et al 2004: https://academic.oup.com/bioinformatics/article/20/18/3363/202143 SYNOPSIS my $minimizer = Bio::Minimizer->new($sequenceString); my $kmers = $minimizer->kmers; # hash of minimizer => kmer my $minimizers= $minimizer->minimizers;# hash of minimizer => [kmer1,kmer2,...] # With more options my $lmer = Bio::Minimizer->new($sequenceString,{k=>31,l=>21}); DESCRIPTION Creates a set of minimizers from sequence VARIABLES $Bio::Minimizer::iThreads Boolean describing whether the module instance is using threads METHODS Bio::Minimizer->new() Arguments: sequence A string of ACGT settings A hash k Kmer length l Minimizer length (some might call it lmer)