Source Information for ens_35_segdup_toronto

Description

Segmental duplication dataset compiled by seeking homologies within the reference sequence.

The data come from:

http://projects.tcag.ca/humandup/segmental_b35/duplication.hg17.gff

Cheung J, Estivill X, Khaja R, MacDonald JR, Lau K, Tsui L-C, Scherer SW. Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence. Genome Biol. 2003;4(4):R25. Epub 2003 Mar 17

Key

Orientation
   Red: Pair members in direct orientation
   Green: Pair members in inverted orientation
   Blue: Pair members on different chromosomes
     
% Identity
   Over 99% identity
   97 - 99% identity
   95 - 97% identity
   Less than 95% identity
     
Spacing
   Less than 100Kb apart
   100Kb - 1Mb apart
   1 - 5Mb apart
   5 - 10Mb apart
   More than 10Mb apart