Bioconductor Task View: SNPsAndGeneticVariability

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Package Maintainer Title
beadarraySNP Jan Oosting Normalization and reporting of Illumina SNP bead arrays
GGtools Vince Carey software and data for genetical genomics (c) 2006 VJ Carey
logicFS Holger Schwender Identification of SNP Interactions
RLMM Nusrat Rabbee A Genotype Calling Algorithm for Affymetrix SNP Arrays
RSNPper VJ Carey interface to for SNP-related data
siggenes Holger Schwender Multiple testing using SAM and Efron's empirical Bayes approaches
SNPchip Robert Scharpf Classes and Methods for high throughput SNP chip data
VanillaICE Robert Scharpf Methods for fitting Hidden Markov Models to SNP chip data