GE CodeLink Human Whole Genome Bioarray (~55 000 human genes) Annotation Data (hwgcod)


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Documentation for package ‘hwgcod’ version 1.5.1

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hwgcod Bioconductor annotation data package
hwgcodACCNUM Map Manufacturer identifiers to GenBank Accession Numbers
hwgcodCHR Map Manufacturer IDs to Chromosomes
hwgcodCHRLENGTHS A named vector for the length of each of the chromosomes
hwgcodCHRLOC Map Manufacturer IDs to Chromosomal Location
hwgcodENTREZID Map between Manufacturer Identifiers and Entrez Gene
hwgcodENZYME Map Between Manufacturer IDs and Enzyme Commission (EC) Numbers
hwgcodENZYME2PROBE Map Between Enzyme Commission Numbers and Manufacturer Identifiers
hwgcodGENENAME Map Between Manufacturer IDs and Genes
hwgcodGO Map between Manufacturer IDs and Gene Ontology (GO)
hwgcodGO2ALLPROBES Map Between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
hwgcodGO2PROBE Map Between Gene Ontology (GO) and Manufacturer Identifiers
hwgcodLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hwgcodMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hwgcodMAPCOUNTS Quality control information for hwgcod
hwgcodOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hwgcodORGANISM The Organism for hwgcod
hwgcodPATH Mappings between probe identifiers and KEGG pathway identifiers
hwgcodPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
hwgcodPFAM Map Manufacturer IDs to Pfam IDs
hwgcodPMID Map between Manufacturer Identifiers and PubMed Identifiers
hwgcodPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
hwgcodPROSITE Map Manufacturer IDs to PROSITE ID
hwgcodQC Quality control information for hwgcod
hwgcodQCDATA Quality control information for hwgcod
hwgcodREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hwgcodSUMFUNC Map between Manufacturer Identifiers and Gene Function Summaries
hwgcodSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hwgcodUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers