# Gene Functional Class Analysis

## Documentation for package ‘GeneGroupAnalysis’ version 1.4.0

- DESCRIPTION file.
- Overview of user guides and package vignettes; browse directory.
- Package NEWS.

## Help Pages

GeneGroupAnalysis-package | The Gene Group Analysis package for Gene Functional Class Analysis.
ArrayInfoFun | Function that extracts the required information from the data set.
GeneGroupAnalysis | The Gene Group Analysis package for Gene Functional Class Analysis.
GeneGrps2AffyGrpsFun | Function that translates GO hierarchical tree of gene symbols to a groups of Affymetrix identifiers of interest.
GeneMaxVarFun | Function to compute the Affymetrix identifiers with the maximum variability between phenotypes.
GGAdata | List containing a collection of gene symbols with their associated GO term and GO hierarchical trees for each ontology
GibbsAllFun.ts | Function to compute the Gibb's sampler for the series data design.
GibbsFun.cs | Function to compute the Gibb's sampler for the cross-sectional data design.
GibbsNPFun.ts | Function to compute the Gibb's sampler for the series data design.
MCMCData.cs | Function that computes the required data set objects for the Gibb's sampler under a cross-sectional data design.
MCMCData.ts | Function that computes the required data set objects for the Gibb's sampler under a time series data design.
SizeGOAffyGrps | Function to compute gene functional classes with a desired size.