89d39dabbad9ab8accb46242630de667 *DESCRIPTION
d943f81d9df9ae713d79cd26e319bdaa *INDEX
8c14663f4b08a48c664879a9963b99ac *Meta/Rd.rds
5f1340c7b954ae62f1a9201cd071cddd *Meta/hsearch.rds
cb03ab5a09870815e4a8f0ead1e622f7 *Meta/links.rds
8010e96ec59eb22d275e7bd79cead224 *Meta/nsInfo.rds
c415a8b09c25aded1118ca3e1c7d2301 *Meta/package.rds
29ecd3828f521ca7f10171f8c3fc82d7 *Meta/vignette.rds
82d91120ae61010f6e153ab4e194a7cf *NAMESPACE
b9ca1b7cf2e04b7c65bd5ab191cf3e4f *NEWS
240d28d145138a75831809e31a480bad *R/GenomicRanges
7bb2679be92339aedec4b206072598cd *R/GenomicRanges.rdb
182a102aa7a3df2156356181ee762901 *R/GenomicRanges.rdx
b7bee67f80723cf700107c08a5323bab *doc/GenomicRangesIntroduction.R
ed213248ed938a69f40da04100cd4c1b *doc/GenomicRangesIntroduction.Rnw
7d2f32961d7809e3fe16deb3cad4da8b *doc/GenomicRangesIntroduction.pdf
d6555ca8a514e498a1ae4f0f38f409ed *doc/GenomicRangesUseCases.R
3c870bee526851f40e9cbbcc58016899 *doc/GenomicRangesUseCases.Rnw
11c6a129a9b5e9543cd3634596acf95e *doc/GenomicRangesUseCases.pdf
061803b4e72a9a065653adb3fc7f5919 *doc/OverlapEncodings.R
1f1283b1233e481c8140396184e019d9 *doc/OverlapEncodings.Rnw
4d90947dcf07978712915f7c0c10f4db *doc/OverlapEncodings.pdf
ad77320fe4536ac1c795030eef12a88d *doc/index.html
c9bf3c0706b5180be367e54e6e261ade *doc/precomputed_results/U1.sbcompHITSa.rda
c7344ec99e9adc45105579143647410c *doc/precomputed_results/U1.sbcompHITSb.rda
b813ecb6a07490912e8b714bfd97c622 *doc/precomputed_results/exbytx.rda
93f08c8abf76627655b2995b4ac3d612 *doc/summarizeOverlaps-modes.pdf
18beb6c9887b701c1f175cb48610707d *doc/summarizeOverlaps.R
73eb33551410199818fbb6372774015a *doc/summarizeOverlaps.Rnw
b53711b4917b412bd5fb15ec5fc40a1d *doc/summarizeOverlaps.pdf
ffcc2b8da187a7833f24c66473b4e153 *extdata/feature_frags.txt
1c380f8159fda8fad5d0d4902ae9ea23 *extdata/sm_treated1.bam
af83f784077fcced98e3603bb7ad7a4e *extdata/sm_untreated1.bam
9ff8018dfb263ac02a7d82e7bdc738a0 *help/AnIndex
ee06290a9fb92504f3cd178b23db0838 *help/GenomicRanges.rdb
6626bb78f273cf71d5c6a340083fb10e *help/GenomicRanges.rdx
714afcdcac5fa677f052a74c0cc48dd9 *help/aliases.rds
d715ebe0a0ad3e5739b9237fe2124cf0 *help/paths.rds
e23c7bc52ae0365a2df92e2420e94ae2 *html/00Index.html
444535b9cb76ddff1bab1e1865a3fb14 *html/R.css
05106219bfb3e0e78bfbd64e0bff7a00 *libs/i386/GenomicRanges.dll
cc73c3dbe0273ea333a653f5365ecba9 *libs/x64/GenomicRanges.dll
4a3278e57441eaaa69b85e6c39dca175 *scripts/cigar_summary.R
18dea3a7f83020bf1c9ded48047b2599 *unitTests/test_GRanges-class.R
adc5f59107cefa220620dc3e8a2a82c8 *unitTests/test_GRangesList-class.R
8697b0df572440c627c3c8d6d08c2549 *unitTests/test_GappedAlignments-class.R
f7abdde3d36a5447ffd592dce7f9ae22 *unitTests/test_Seqinfo-class.R
09c338dd45d1760ddf41b473eccd6e59 *unitTests/test_SummarizedExperiment-class.R
e6b2c699fb708805b6e245dec8a64fe8 *unitTests/test_SummarizedExperiment-rowData-methods.R
912cc88b2e877493d91fad02ec398815 *unitTests/test_cigar-utils.R
dbe18c9d603bbb96ebbe324fd00bdf84 *unitTests/test_coverage-methods.R
1ef38fbf1827d36dd0dc5bbd9ab33271 *unitTests/test_findOverlaps-methods.R
ca1cad7f248d1fb6f868ca107a3f200d *unitTests/test_findSpliceOverlaps-methods.R
5254ace0fd174f8a33c673c49f23005b *unitTests/test_inter-range-methods.R
04539b0f398b0aea1ae6b6893bdc27f9 *unitTests/test_intra-range-methods.R
c80752c4899c156b818ab477bda20019 *unitTests/test_nearest-methods.R
824cb5311205cf97a8eb6bd89094f815 *unitTests/test_seqlevels-utils.R
85e44001f9cf60426998d01e761cebf5 *unitTests/test_setops-methods.R
4e6ac61fe1c613373e168ff775d5f925 *unitTests/test_summarizeOverlaps-methods.R
8664e36ad4e4e0623d0f1495c9da56b8 *unitTests/test_utils.R
