# This package is designed to perform Gene Set Analysis across multiple genomic platforms

## Documentation for package ‘RTopper’ version 1.4.1

- DESCRIPTION file.
- Overview of user guides and package vignettes; browse directory.

## Help Pages

RTopper-package | A package to perform run Gene Set Enrichment across genomic platforms
adjustPvalGSE | Multiple testing correction
combineGSE | Combines GSE results
computeDrStat | Computes gene-to-phenotype associations scores
convertToDr | Converts genomic data to a list suitable for computing gene-to-phenotype scores
dat | A test dataset for the RTopper package
fgsList | A list of Functional Gene Set (FGS) to be used to run the examples in the RTopper package
gseResultsSep | A list of separated gene set enrichment p-values to be used to run the examples in the RTopper package
intScores | A list of genomic scores integrated across distinct data sets to be used to run the examples in the RTopper package
pheno | A test dataset for the RTopper package
RTopper | A package to perform run Gene Set Enrichment across genomic platforms
runBatchGSE | To perform GSE analysis over multipple experiments and functional themes
sepScores | A list of separate gene-to-phenotype association scores, obtained indipendently for each distinct data set to be used to run the examples in the RTopper package