Package: GOSemSim
Type: Package
Title: GO-terms Semantic Similarity Measures
Version: 1.22.0
Author: Guangchuang Yu
Maintainer: Guangchuang Yu <guangchuangyu@gmail.com>
Description: Implemented five methods proposed by Resnik, Schlicker,
        Jiang, Lin and Wang respectively for estimating GO semantic
        similarities. Support many species, including Anopheles,
        Arabidopsis, Bovine, Canine, Chicken, Chimp, Coelicolor, E coli
        strain K12 and Sakai, Fly, Human, Malaria, Mouse, Pig, Rhesus,
        Rat, Worm, Xenopus, Yeast, and Zebrafish.
Depends: R (>= 2.10), Rcpp
LinkingTo: Rcpp
Imports: methods, AnnotationDbi, GO.db, org.Hs.eg.db, Rcpp
Suggests: DOSE, clusterProfiler, BiocInstaller, knitr
Collate: 'clusterSim.R' 'combineMethods.R' 'computeIC.R' 'ICMethods.R'
        'gene2GO.R' 'geneSim.R' 'goSim.R' 'termSim.R' 'WangMethod.R'
        'utilities.R' 'zzz.R' 'GOSemSim-package.R' 'mgeneSim.R'
        'mgoSim.R' 'mclusterSim.R'
VignetteBuilder: knitr
License: GPL-2
URL: http://bioinformatics.oxfordjournals.org/content/26/7/976.full
Packaged: 2014-04-12 09:02:43 UTC; biocbuild
biocViews: GO, Clustering, Pathways, Network
Built: R 3.1.0; i386-w64-mingw32; 2014-04-12 13:55:58 UTC; windows
Archs: i386, x64
