# flowBeads: Analysis of flow bead data

## Documentation for package ‘flowBeads’ version 1.2.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

flowBeads-package | flowBeads
absoluteNormalise | absoluteNormalise
absoluteNormalise-method | absoluteNormalise
BeadFlowFrame | BeadFlowFrame
BeadFlowFrame-class | BeadFlowFrame
beads1 | Dako beads on day 1
beads2 | Dako beads on day 2
cytocalmef | Cytocal config file
dakomef | Dako config file
dBeadFlowFrame | BeadFlowFrame
flowBeads | flowBeads
gateBeads | gateBeads
gateBeads-method | gateBeads
GatedBeadFlowFrame | GatedBeadFlowFrame
GatedBeadFlowFrame-class | GatedBeadFlowFrame
generateReport | generateReport
generateReport-method | generateReport
getClusteringStats | getClusteringStats
getClusteringStats-method | getClusteringStats
getDate | getDate
getDate-method | getDate
getMEFparams | getMEFparams
getMEFparams-method | getMEFparams
getMEFtransform | getMEFtransform
getMEFtransform-method | getMEFtransform
getParams | getParams
getParams-method | getParams
getTransformFunction | getTransformFunction
getTransformFunction-method | getTransformFunction
hasMEF | hasMEF
hasMEF-method | hasMEF
length | length
length-method | length
mefTransform | Logicle transformation constructor
plot | Plot the results of the clustering. Plot only the requested channel which should have a corresponding entry in the MEF files
plot-method | Plot the results of the clustering. Plot only the requested channel which should have a corresponding entry in the MEF files
relativeNormalise | relativeNormalise
relativeNormalise-method | relativeNormalise
show | BeadFlowFrame
toMEF | toMEF
toMEF-method | toMEF