Package: qrqc
Version: 1.18.0
Date: 2012-04-17
Title: Quick Read Quality Control
Author: Vince Buffalo
Maintainer: Vince Buffalo <vsbuffalo@ucdavis.edu>
Imports: reshape, ggplot2, Biostrings, biovizBase, graphics, methods,
        plyr, stats
Depends: reshape, ggplot2, Biostrings, biovizBase, brew, xtable,
        Rsamtools (>= 1.3.28), testthat
LinkingTo: Rsamtools
Description: Quickly scans reads and gathers statistics on base and
        quality frequencies, read length, k-mers by position, and
        frequent sequences. Produces graphical output of statistics for
        use in quality control pipelines, and an optional HTML quality
        report. S4 SequenceSummary objects allow specific tests and
        functionality to be written around the data collected.
License: GPL (>=2)
URL: http://github.com/vsbuffalo/qrqc
biocViews: Sequencing, QualityControl, DataImport, Preprocessing,
        Visualization
Packaged: 2014-04-12 09:34:01 UTC; biocbuild
Built: R 3.1.0; i386-w64-mingw32; 2014-04-12 16:07:09 UTC; windows
Archs: i386, x64
