c2f2298be5cb2e37b33170b7f584520d *CITATION
2bad6ea5f6c15b7b9cc5a01325cee99f *DESCRIPTION
8ccb72b22db25c2afab13669b4b8b1e3 *INDEX
d67aace9b4c2964f98cbb3bdce0e449d *Meta/Rd.rds
c8440c06be5e093e05779d74c0ffa6b7 *Meta/features.rds
c3b37f7629b3ff6fabebe75a19cd0b1e *Meta/hsearch.rds
9a1108b95065ab22c7c14d3cab27b465 *Meta/links.rds
0c86c1d9be57cc3079a3271b4f554b47 *Meta/nsInfo.rds
800f1e431a083a46111a4caf50ec6156 *Meta/package.rds
cdebe14f0e84844873b2a67c142fa4f2 *Meta/vignette.rds
c957f0fa499e645038131990e49e1394 *NAMESPACE
98dc2dc92a5eb11e21062da15fa2d6b6 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/DEXSeq
52a20170c21fdb70470424ecbd44bfbd *R/DEXSeq.rdb
da4109fb50f93df4979136ee4bf09af4 *R/DEXSeq.rdx
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c0ce4991bc831e6727d8fc4d95e76a6e *doc/DEXSeq.html
a6402ee059e23e198ef1577f431ace6e *doc/index.html
7bf222f21e92d3f41269ee0bd3a0ec9a *help/AnIndex
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147d2968ea00c8cecde289c1c223fcca *help/DEXSeq.rdb
6d0468e5db2bbfba9425ea1babf69957 *help/DEXSeq.rdx
40df8899b75086d687ecfad469eede6a *help/DEXSeqDataSet-class.html
40df8899b75086d687ecfad469eede6a *help/DEXSeqDataSet.html
40df8899b75086d687ecfad469eede6a *help/DEXSeqDataSetFromHTSeq.html
40df8899b75086d687ecfad469eede6a *help/DEXSeqDataSetFromSE.html
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b73e71035f439c9dbd311fc1032e458c *help/DEXSeqResults.html
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dea6408f3e0455c780755332b80d2a74 *help/[,DEXSeqDataSet,ANY,ANY-method.html
dea6408f3e0455c780755332b80d2a74 *help/[,DEXSeqDataSet,ANY-method.html
dea6408f3e0455c780755332b80d2a74 *help/[,DEXSeqDataSet-method.html
b9251dc73322b8fe89bedba2daab9915 *help/accessors.html
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7b7b77957f32bd1cfdfa87e14134be94 *help/counts.html
087f358ae0ee22ac600a7164a2105e7d *help/estimateDispersions,DEXSeqDataSet-method.html
087f358ae0ee22ac600a7164a2105e7d *help/estimateDispersions.html
e8b630464de5c3fb1b4941beb619f6d7 *help/estimateExonFoldChanges.html
fe3536f908485917ad89c594cd57b676 *help/estimateSizeFactors,DEXSeqDataSet-method.html
fe3536f908485917ad89c594cd57b676 *help/estimateSizeFactors.html
b9251dc73322b8fe89bedba2daab9915 *help/exonIDs.html
b9251dc73322b8fe89bedba2daab9915 *help/featureCounts.html
b9251dc73322b8fe89bedba2daab9915 *help/featureIDs.html
d5c09ee38ec1f237026dd55f559442c1 *help/findOverlaps,DEXSeqResults,GenomicRanges-method.html
d5c09ee38ec1f237026dd55f559442c1 *help/findOverlaps-methods.html
d5c09ee38ec1f237026dd55f559442c1 *help/findOverlaps.html
b9251dc73322b8fe89bedba2daab9915 *help/geneIDs.html
b9251dc73322b8fe89bedba2daab9915 *help/groupIDs.html
d5c09ee38ec1f237026dd55f559442c1 *help/methods-gr.html
dea6408f3e0455c780755332b80d2a74 *help/otherMethods.html
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9b47d36f9f31d852e7da7ef261d0243b *help/perGeneQValue.html
f2a780572c71d3a5b3ac2eaf74b3553e *help/plotDEXSeq.html
cb24edc209ada193a3ba90e40af48097 *help/plotDispEsts,DEXSeqDataSet-method.html
cb24edc209ada193a3ba90e40af48097 *help/plotDispEsts.html
be5c2c9b35f4b71137bc4c42ab777540 *help/plotMA,DEXSeqDataSet-method.html
be5c2c9b35f4b71137bc4c42ab777540 *help/plotMA,DEXSeqResults-method.html
be5c2c9b35f4b71137bc4c42ab777540 *help/plotMA-methods.html
be5c2c9b35f4b71137bc4c42ab777540 *help/plotMA.html
b9251dc73322b8fe89bedba2daab9915 *help/sampleAnnotation.html
d5c09ee38ec1f237026dd55f559442c1 *help/subsetByOverlaps,DEXSeqResults,GenomicRanges-method.html
d5c09ee38ec1f237026dd55f559442c1 *help/subsetByOverlaps-methods.html
d5c09ee38ec1f237026dd55f559442c1 *help/subsetByOverlaps.html
15bd860254ed56b8a2bacc916087efaf *help/testForDEU.html
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11f20825e7cd656a5795c409a8ef72d8 *html/DEXSeqDataSet.html
4e47b7c0006e8b166349d9181ca36e6d *html/DEXSeqHTML.html
408c7e972f7ba002add86b706937f151 *html/DEXSeqResults.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
c172cf860ff26329867a59adbc5f95b6 *html/accessors.html
1af41db52e325bef5aa321e640f07210 *html/counts.html
6ca9418c6056fa3300b1a59781b54983 *html/estimateDispersions.html
09fa3a50094f2bb483512130df654b87 *html/estimateExonFoldChanges.html
fc2ddaf95dd28f3dc126c336f2438d7d *html/estimateSizeFactors.html
8b93387d036d67c9fddea04631fd6358 *html/methods-gr.html
593e4b306474127970886418aa4aa8f2 *html/otherMethods.html
64077ffdfc1411f1ce433883cd6c2982 *html/perGeneQValue.html
4c9ce5fa1e18c2de0943d53561ea57ac *html/plotDEXSeq.html
3b41567b704a641f98c3978d8043a285 *html/plotDispEsts.html
704ee1994a1d2dd9a96d0d3038522db2 *html/plotMA.html
50bd1195e8e45997e026307705bf03d3 *html/testForDEU.html
c926e1968f5d878e591dcec64f288b27 *python_scripts/dexseq_count.py
29c6d83cb1598316ef75da3f909a7334 *python_scripts/dexseq_prepare_annotation.py
