5b81fb4d1878a998a73845e942fc22e0 *CITATION
f723add596e689dccd399c9c2bbd16e3 *DESCRIPTION
c6501955c535085ea3fc41ffed11b1c7 *INDEX
1240beecc6b3db73d0358fe7358a888b *Meta/Rd.rds
1e2752ebda3398ee2cc299bdfe7b0eb8 *Meta/data.rds
c8440c06be5e093e05779d74c0ffa6b7 *Meta/features.rds
3466e0d235a1c317a3322e13e7013e49 *Meta/hsearch.rds
6442e0cf16175d9b59a774f9c23d4873 *Meta/links.rds
489fa2ae67b0460f85f7474ccf587454 *Meta/nsInfo.rds
8b50cc3082e9fc6d58cd02668a0f04d4 *Meta/package.rds
5ed08bf9d84d3db029ba9856e7de73ff *Meta/vignette.rds
115b7a62bddcccc96f4f0cd515642b79 *NAMESPACE
dd51e1db84256087fc65e4b57bf15a41 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/DMRcaller
faaeafa79bec87f43db47dfeed50f873 *R/DMRcaller.rdb
8ba21ae247dfb7427f40d5ccadbe157a *R/DMRcaller.rdx
2253e7bffbffad160a29fa048fa2012d *data/DMRsNoiseFilterCG.RData
2b45c1f38b8ae6ad528642223b292c3b *data/GEs.RData
1171d29fd955c635be3f364c26f7e78e *data/datalist
83ead4ae7d62dd4ed1ed3669e5a77365 *data/methylationDataList.RData
b3ad8509713fbc7abfc86a6566c8c5a2 *data/syntheticDataReplicates.RData
68614226b48fd20580dbba9fe708ea78 *doc/DMRcaller.R
cc4003906cba39ef430a424f3711f290 *doc/DMRcaller.Rnw
adc13cb84610c91d2e0a59c6f890e444 *doc/DMRcaller.pdf
92c032184932c52f909061b5d56349ee *doc/index.html
f8b08ba2d0a5c9c78e7f6eb87c9a0e2b *help/AnIndex
30a676543341c0679f04afdb21fe2612 *help/DMRcaller-package.html
30a676543341c0679f04afdb21fe2612 *help/DMRcaller.html
b8a08333fe4484fc562c81b776af911e *help/DMRcaller.rdb
d3180620432d61b81cac2a9f5fa84f16 *help/DMRcaller.rdx
1b43f01858793f93222db1444fbb63be *help/DMRsNoiseFilterCG.html
161fe1aec8a98173eac3e446d3521bb1 *help/GEs.html
f9807898e5378ead18d89632c023b26d *help/aliases.rds
3ed513650a170b93ad8269dc3049b180 *help/analyseReadsInsideRegionsForCondition.html
c4bb847b3deece6c8d7a614af695d8ca *help/computeDMRs.html
d98b1ae983db5090240077053e16ad98 *help/computeDMRsReplicates.html
6d600b2d454d08be8ff9c1d3360ec401 *help/computeMethylationDataCoverage.html
718d4c7e178094b7d54f183f937bd73d *help/computeMethylationDataSpatialCorrelation.html
fe1eb8a8be9e3eedf5c65965ac5645a1 *help/computeMethylationProfile.html
c17de99c4394ec8c473bed30becc9ae2 *help/computeOverlapProfile.html
21e0fd47b84041114e0afceae3f01a3e *help/extractGC.html
e45c0ba26be9254b398d8972c93a2581 *help/filterDMRs.html
b13a7cf575cb508be4017b725a308323 *help/getWholeChromosomes.html
d9c1fe7fea1b046fd2604fcf490835b8 *help/joinReplicates.html
a9abd0645e5f43d20bf5b4f3c3f500e0 *help/mergeDMRsIteratively.html
38e0ee1ecd50de888e519832d29d1b02 *help/methylationDataList.html
0e75635f6b2c7c447c834c4628555c7c *help/paths.rds
04a960a5fb2e5fb76743b9c179889f5d *help/plotLocalMethylationProfile.html
15d22ba79d2172301063b8dc84bf736a *help/plotMethylationDataCoverage.html
bd85f0fd634f5744fc9e0493f1bc5e44 *help/plotMethylationDataSpatialCorrelation.html
b23d747157fbcc69b4bb548720ec417f *help/plotMethylationProfile.html
bb3268f8cc44e0ceee6bc73c26646c57 *help/plotMethylationProfileFromData.html
b739eaa15772e631420015a14e4e2d62 *help/plotOverlapProfile.html
1176e9e12f471c696a41a1ea1ee8cc2c *help/poolMethylationDatasets.html
5ef22b414862eee604fe6cb795c63e8c *help/poolTwoMethylationDatasets.html
5dc2b0264484b6c46494969a4c6abf23 *help/readBismark.html
c46363326e558c25785a2f7e91c4bd5a *help/readBismarkPool.html
05a25223adcaf0da68781e05830ae058 *help/saveBismark.html
19b2fa848661dd11931369e4209fd84f *help/syntheticDataReplicates.html
7899eceb2969d4849c72c7b54c3451da *html/00Index.html
51290a892c41b0da740b052fbbda1a94 *html/DMRcaller.html
418787fd985564f492e431d4b6ac4cc3 *html/DMRsNoiseFilterCG.html
aee1e9003706ac2b9d146deef3d13d76 *html/GEs.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
562baad431d216b3760097bff6de40bb *html/analyseReadsInsideRegionsForCondition.html
482364d7cf33412001e635e1bfc4987f *html/computeDMRs.html
633d7c0c5136aff867edf15e5fb948fe *html/computeDMRsReplicates.html
ca6937cb237a98f101f8a40b04b968e2 *html/computeMethylationDataCoverage.html
0933f51e35d52412b5aaffa25e528b08 *html/computeMethylationDataSpatialCorrelation.html
057f3501a17c0ac6f469b694938beb3c *html/computeMethylationProfile.html
bfa1c274d35a280ab05a8756e1014e24 *html/computeOverlapProfile.html
680cbc1dbbc055a23885bfbfdd3c097b *html/extractGC.html
367c9346aeea50385915dbb1e0acc24c *html/filterDMRs.html
4ab47978e44824a8ffbacdc25f8c8d12 *html/getWholeChromosomes.html
6840899387f2fa36df44f412946cc0e7 *html/joinReplicates.html
dc159576341d9ea5e56b99b654b88ea0 *html/mergeDMRsIteratively.html
a2417d89bc2fd8e97c46f1a91fbae079 *html/methylationDataList.html
b7cd50b7306f53c219bfcadd6e5fe8fa *html/plotLocalMethylationProfile.html
eede83f8789eff5e83daeabfa1d08785 *html/plotMethylationDataCoverage.html
10c6604572d3b60c386313d5000453e6 *html/plotMethylationDataSpatialCorrelation.html
22040da9f753eaac40dce2bed52b09fc *html/plotMethylationProfile.html
f7d4a8fa1239b793c523b4f7971975b2 *html/plotMethylationProfileFromData.html
c8efa9411a0dab41853e94075008c8dd *html/plotOverlapProfile.html
942e2cae226666fc00b4afea4b3b7078 *html/poolMethylationDatasets.html
c3c6cbdec5267898ab371c54c8b4167c *html/poolTwoMethylationDatasets.html
62025bf67af3505205aa48448ae23039 *html/readBismark.html
2efb4a945e25ded0b9a2ae45edae6923 *html/readBismarkPool.html
dc0dfa93c3e8865ff65fb7b08ffbdad2 *html/saveBismark.html
13ee0993e1391b41b725b332d8fab96e *html/syntheticDataReplicates.html
ff3371d047e32b593a502c2b41a7985c *unitTests/test_computeDMRs.R
