.ToxicoSet	ToxicoSet-class
annotation	annotation
annotation,ToxicoSet-method	ToxicoSet-class
annotation<-	annotation-set
annotation<-,ToxicoSet,list-method	ToxicoSet-class
availableTSets	availableTSets
cellInfo,ToxicoSet-method	ToxicoSet-class
cellInfo<-,ToxicoSet,data.frame-method	ToxicoSet-class
cellNames,ToxicoSet-method	ToxicoSet-class
cellNames<-,ToxicoSet,character-method	ToxicoSet-class
checkTSetStructure	checkTSetStructure
computeAUC	computeAUC
computeIC50	computeICn
computeICn	computeICn
computeLimmaDiffExpr	computeLimmaDiffExpr
computeLimmaDiffExpr,ToxicoSet-method	computeLimmaDiffExpr-ToxicoSet-method
curation	curation
curation,ToxicoSet-method	ToxicoSet-class
curation<-	curation-set
curation<-,ToxicoSet,list-method	ToxicoSet-class
datasetType	datasetType
datasetType,ToxicoSet-method	ToxicoSet-class
datasetType<-	datasetType-set
datasetType<-,ToxicoSet-method	ToxicoSet-class
dateCreated,ToxicoSet-method	ToxicoSet-class
dim,ToxicoSet-method	dim-ToxicoSet-method
downloadTSet	downloadTSet
drugGeneResponseCurve	drugGeneResponseCurve
drugInfo	drugInfo
drugInfo,ToxicoSet-method	ToxicoSet-class
drugInfo<-	drugInfo-set
drugInfo<-,ToxicoSet,data.frame-method	ToxicoSet-class
drugNames	drugNames
drugNames,ToxicoSet-method	ToxicoSet-class
drugNames<-	drugNames-set
drugNames<-,ToxicoSet,character-method	ToxicoSet-class
drugPerturbationSig	drugPerturbationSig
drugTimeResponseCurve	drugTimeResponseCurve
featureInfo,ToxicoSet,character-method	ToxicoSet-class
featureInfo<-,ToxicoSet,character,data.frame-method	ToxicoSet-class
fNames,ToxicoSet,character-method	ToxicoSet-class
fNames<-,ToxicoSet,character,ANY-method	ToxicoSet-class
geneDrugPerturbation	geneDrugPerturbation
HCC_sig	HCC_sig
logLogisticRegression	logLogisticRegression
mDataNames,ToxicoSet-method	mDataNames-ToxicoSet-method
molecularProfiles,ToxicoSet-method	ToxicoSet-class
molecularProfiles<-,ToxicoSet,character,character,matrix-method	ToxicoSet-class
molecularProfiles<-,ToxicoSet,character,missing,matrix-method	ToxicoSet-class
molecularProfilesSlot,ToxicoSet-method	ToxicoSet-class
molecularProfilesSlot<-,ToxicoSet,ANY-method	ToxicoSet-class
name,ToxicoSet-method	name-ToxicoSet-method
pertNumber,ToxicoSet-method	ToxicoSet-class
pertNumber<-,ToxicoSet,array-method	ToxicoSet-class
phenoInfo,ToxicoSet,character-method	ToxicoSet-class
phenoInfo<-,ToxicoSet,character,data.frame-method	ToxicoSet-class
sensitivityInfo,ToxicoSet-method	ToxicoSet-class
sensitivityInfo<-,ToxicoSet,data.frame-method	ToxicoSet-class
sensitivityMeasures,ToxicoSet-method	ToxicoSet-class
sensitivityProfiles,ToxicoSet-method	ToxicoSet-class
sensitivityProfiles<-,ToxicoSet,data.frame-method	ToxicoSet-class
sensitivityProfiles<-,ToxicoSet,matrix-method	ToxicoSet-class
sensitivityRaw	sensitivityRaw
sensitivityRaw,ToxicoSet-method	ToxicoSet-class
sensitivityRaw<-	sensitivityRaw-set
sensitivityRaw<-,ToxicoSet,array-method	ToxicoSet-class
sensitivitySlot	sensitivitySlot
sensitivitySlot,ToxicoSet-method	ToxicoSet-class
sensitivitySlot<-	sensitivitySlot-set
sensitivitySlot<-,ToxicoSet,list-method	ToxicoSet-class
sensNumber,ToxicoSet-method	ToxicoSet-class
sensNumber<-,ToxicoSet,matrix-method	ToxicoSet-class
show,ToxicoSet-method	show-ToxicoSet-method
show,ToxicoSig-method	show-ToxicoSig-method
showSigAnnot	showSigAnnot
subsetTo	subsetTo
summarizeMolecularProfiles	summarizeMolecularProfiles
summarizeSensitivityProfiles	summarizeSensitivityProfiles
TGGATESsmall	TGGATESsmall
ToxicoSet	ToxicoSet
ToxicoSet-class	ToxicoSet-class
ToxicoSig	ToxicoSig
updateCellId	updateCellId
updateDrugId	updateDrugId
[,ToxicoSet,ANY,ANY,ANY-method	sub-ToxicoSet-ANY-ANY-ANY-method
