.CellScabbard | The CellScabbard class |
AIBSARNAid | Methods for the CellScabbard class |
AIBSARNAid<- | Methods for the CellScabbard class |
buildAIBSARNA | Function to create a SummarizedExperiment containing BrainSpan Data |
CellScabbard | The CellScabbard class |
CellScabbard-class | The CellScabbard class |
CellScabbard-method | Methods for the CellScabbard class |
CellScabbard-methods | Methods for the CellScabbard class |
dataSetId | Methods for the CellScabbard class |
dataSetId<- | Methods for the CellScabbard class |
getExampleVector | Get an example vector for specified genes |
getExternalVector | getExternalVector |
getRelevantGenes | Get a subset of AIBSARNA using a Gene Expression Vector |
getSimDataFrame | Get Age, Structure Acronym, and Similarity Scores Data Frame |
getSimMatrix | Get Age, Structure Acronym, and Similarity Score Matrix |
getSimScores | Get Similarity Scoring for a Gene Expression Vector |
getTrimmedExternalSet | Get a trimmed version of an external data set |
getUNDmatrix | getUNDmatrix |
relevantGenes | Methods for the CellScabbard class |
relevantGenes<- | Methods for the CellScabbard class |
runShinyBrainSABER | ShinyBrainSABER |
similarityDFs | Methods for the CellScabbard class |
similarityDFs<- | Methods for the CellScabbard class |
similarityMatrices | Methods for the CellScabbard class |
similarityMatrices<- | Methods for the CellScabbard class |
similarityScores | Methods for the CellScabbard class |
similarityScores<- | Methods for the CellScabbard class |
UNDmatrices | Methods for the CellScabbard class |
UNDmatrices<- | Methods for the CellScabbard class |