Tools to assess and compare miRNA expression estimatation methods


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Documentation for package ‘miRcomp’ version 1.24.0

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accuracy Assess the accuracy of the expression estimates
completeFeatures Determine the Number of Completely Observed Features
expressionComp Compare expression estimates between two methods
lifetech The processed data generated using the LifeTech software.
limitOfDetection Assess the limit of detection of a given method
miRcompShinyApp Launch a Shiny app to use the miRcomp package interactively
precision Assess the precision of the expression estimates
qpcRb4 The processed data generated using the 4 parameter sigmoidal method from the qpcR software.
qpcRb5 The processed data generated using the 5 parameter sigmodial method from the qpcR software.
qpcRdefault The processed data generated using the default method (4 parameter log-logistic) implemented in the qpcR software package.
qpcRl5 The processed data generated using the 5 parameter log-logistic method from the qpcR software.
qpcRlinexp The processed data generated using the linear-exponential method implemented in the qpcR software package.
qualityAssessment Quality Assessment for MicroRNA Expression Estimates
titrationResponse Assess monotone signal across titration