annotate.protein_id | Annotate protein_id |
BiblioSpec | BiblioSpec Reader |
bibliospec | BiblioSpec Reader |
cdsw | Generate Dynamic SWATH Window |
generate.consensus | Class '"specLSet"' |
generate.consensus-method | Class '"specLSet"' |
generateDynamicSwathWindow | Generate Dynamic SWATH Window |
genSwathIonLib | Spectrum library generator for SWATH analysis |
getProteinPeptideTable | Class '"specLSet"' |
getProteinPeptideTable-method | Class '"specLSet"' |
ionlibrary | Class '"specLSet"' |
ionlibrary-method | Class '"specLSet"' |
iRT | iRT peptides - independent retention time peptides |
irt | iRT peptides - independent retention time peptides |
iRTpeptides | iRT peptides - independent retention time peptides |
merge.specLSet | Class '"specLSet"' |
merge.specLSet-method | Class '"specLSet"' |
MRM | Spectrum library generator for SWATH analysis |
ms1.p2069 | ms1 mass |
peptideStd | Peptide standard |
peptideStd.redundant | Peptide standard |
plot | Class '"specLSet"' |
plot,specL-methods | Method for Function 'plot' in Package 'specL' |
plot,specLSet-methods | Method for Function 'plot' in Package 'specL' |
plot-method | Method for Function 'plot' in Package 'specL' |
plot-method | Class '"specL"' |
plot-method | Class '"specLSet"' |
plot-methods | Method for Function 'plot' in Package 'specL' |
plot.psm | BiblioSpec Reader |
plot.psmSet | BiblioSpec Reader |
read.bibliospec | BiblioSpec Reader |
rt.input | Class '"specLSet"' |
rt.input-method | Class '"specLSet"' |
rt.normalized | Class '"specLSet"' |
rt.normalized-method | Class '"specLSet"' |
show-method | Methods for Function 'show' in Package 'specL' ~~ |
show-method | Class '"specL"' |
show-method | Class '"specLSet"' |
show-methods | Methods for Function 'show' in Package 'specL' ~~ |
Skyline | BiblioSpec Reader |
skyline | BiblioSpec Reader |
specL | Spectrum library generator for SWATH analysis |
specL-class | Class '"specL"' |
specLSet-class | Class '"specLSet"' |
summary-method | Class '"specLSet"' |
summary.psmSet | BiblioSpec Reader |
SWATH | Spectrum library generator for SWATH analysis |
swath | Spectrum library generator for SWATH analysis |
write.spectronaut | Methods for Function 'write.spectronaut' in Package 'specL' |
write.spectronaut,specL-methods | Methods for Function 'write.spectronaut' in Package 'specL' |
write.spectronaut,specLSet-methods | Methods for Function 'write.spectronaut' in Package 'specL' |
write.spectronaut-method | Class '"specL"' |
write.spectronaut-method | Class '"specLSet"' |
write.spectronaut-method | Methods for Function 'write.spectronaut' in Package 'specL' |