compute_weights_default {CIMICE} | R Documentation

## Compute default weights

### Description

This procedure computes the weights for edges of a graph accordingly to CIMICE specification. (See vignettes for further explainations)

### Usage

    compute_weights_default(g, freqs)

### Arguments

`g` | a graph (must be a DAG with no transitive edges)
`freqs` | observed frequencies of genotypes

### Value

a graph with the computed weights

### Examples

    require(dplyr)
    preproc <- example_dataset() %>% dataset_preprocessing
    samples <- preproc[["samples"]]
    freqs   <- preproc[["freqs"]]
    labels  <- preproc[["labels"]]
    genes   <- preproc[["genes"]]
    g <- graph_non_transitive_subset_topology(samples, labels)
    compute_weights_default(g, freqs)

[Package CIMICE version 1.2.1 Index]