7bcb1d2ed1d4c2e7473e0588c0b77e9a *CITATION
1ebd2b4193d8d42b926f7f5bb21db1dd *DESCRIPTION
77972aa18fb5ad1f4fff258b86f5a5fa *INDEX
7d3baf538e29712e65770fa6f2337cf4 *Meta/Rd.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
fa83568a401b9fb202ed48bd9eaf7c67 *Meta/hsearch.rds
16ba665d96f6a84d9f46fc88a009375d *Meta/links.rds
11c1b0e4cd180cedb8552490e314fd41 *Meta/nsInfo.rds
e93747209300c9663846990db871ad5a *Meta/package.rds
34b8d496f5a8d7c6f0e5627abb914f6a *Meta/vignette.rds
781f923d199b9ec8eb243a14257c9be6 *NAMESPACE
469cd10f41696a50b203b5beebe65403 *Perl/create_wig_files.pl
31040bf7e95da06c8791a5554ac73f73 *Perl/downloaded_Ensembl_annotation.pl
1905bdc8767cac8bfb282d5acf95fd03 *Perl/find_bismark_CpG_sites.pl
5268683bd4a039463650fb2fb32be6fb *Perl/integrate_island.pl
a03987a77e8e23f8e5555e8147ceddb3 *Perl/integrate_site.pl
d6c68f1fe41ced6e98a766a3757313da *R/COHCAP
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b1aee9e821ee35ea0308d3b0b1697803 *R/COHCAP.rdx
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9e3927766f459acf40846ee972e7d2a0 *doc/COHCAP.Rnw
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ca434c7aace977007c2d13c290dfb05f *extdata/BSSeq/HCT116_truncated.bed
c4530c4aad0e1049134e4db51150acb9 *extdata/BSSeq/SRR096437_truncated.bismark.cov
f9ad0c63f5cdaac0c27a87ae7c68681f *extdata/BSSeq/SRR096438_truncated.bismark.cov
83aa21de906e8302313868bd34060c41 *extdata/EPIC_DEMO.txt
fee204890e6be9d28e17eb5c67d49a65 *extdata/EPIC_DEMO_mapping.txt
970efb3aa51ae32da0a05bf6833f04ba *extdata/EPIC_DEMO_samples.txt
63c6f5e0cfb829637f1cf7ce6cd46358 *extdata/GENCODE_Genes_truncated.bed
4f791f362bc2a65a84e17ccb63cd5b09 *extdata/GSE42308_truncated.txt
8ee014488bc8004c52a3f068ab7a00c8 *extdata/UCSC_CpG_Islands_truncated.bed
d4fabd0da043dd0e6a9aa7f1e56372f1 *extdata/expression-Average_by_Island_truncated.txt
7d171b7fbfd555f45eb7795addc4ac93 *extdata/expression-Average_by_Site_truncated.txt
e060f6b4befd14c9cf2430b89d13499e *extdata/sample_GSE42308.txt
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570020c7888d56dfa67d9198859e89d4 *help/COHCAP.avg.by.island.html
96519fa18e351f497f53788901e79d94 *help/COHCAP.avg.by.site.html
369f8704e3bcbb8d0f16eac38ea7e51d *help/COHCAP.denovo.html
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a39a927929da879defab389f5089e845 *help/COHCAP.qc.html
6d8b1f1d6dbc23d9a2218bd6c90a47b1 *help/COHCAP.rdb
83a1f5249d46835c4fe546b4ed078e0e *help/COHCAP.rdx
77377441a36454f22f20dbb2e719b478 *help/COHCAP.reformatFinalReport.html
ed2d50c7727411b75cf3f87264ebeaa1 *help/COHCAP.site.html
aadfb2e936f40b0aef8d74134c959b67 *help/aliases.rds
3076e2315c869dc0e56607a318e05512 *help/paths.rds
853eadbb3fb5a24849a7553163f6aafc *html/00Index.html
5e0060c6581e18aeca6366ef081cc3db *html/COHCAP.BSSeq.preprocess.html
e3d8fd57c08fb71290e0b11dd6215acc *html/COHCAP.BSSeq_V2.methyl.table.html
a967cd5203cd18ce361c7f6b6478323b *html/COHCAP.annotate.html
9427e01b9ba8adf3faac75e5dc3d22f9 *html/COHCAP.avg.by.island.html
39a357465086b7bc5d5550728d4ef33f *html/COHCAP.avg.by.site.html
55d0d8f7d40fbbb30689132eb60a0b86 *html/COHCAP.denovo.html
28351e067e540c777596c45277bfcd59 *html/COHCAP.integrate.avg.by.island.html
d3368fbd7e0037cae7ba569105e920de *html/COHCAP.integrate.avg.by.site.html
456d2a372fd9c85a9cb221b065a85a34 *html/COHCAP.qc.html
18f3c39f33966ae2882ab6814c87be15 *html/COHCAP.reformatFinalReport.html
f01dea50464c87c1c53a0a0227ec3e43 *html/COHCAP.site.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
21a11a0824d0c534446158762bf0b514 *libs/i386/COHCAP.dll
ed76f4f8f6b2c66e892eeb863d023421 *libs/x64/COHCAP.dll
