query_ctd_gene {CTDquerier} | R Documentation

## Function to query CTDbase using gene terminology ( Gene Symbol )

### Description

This function checks for CTDbase gene vocabulary and query CTDbase for each one, downloading gene-gene interactions, chemicals interactions, associated disease, associated KEGG pathways and associated GO terms.

### Usage

    query_ctd_gene(terms, ask = TRUE, verbose = FALSE)

### Arguments

`terms` | Character vector with the genes used in the query.
`ask` | (default `TRUE`) If `TRUE` it asks the the persistent location must be used to save the vocabulary if it was not downloaded previously.
`verbose` | (default `FALSE`) If set to `TRUE` is shows relevant information of each step.

### Value

An object of class `CTDdata`.

### Examples

    rst <- query_ctd_gene( terms = c( "APP", "HMOX1A", "hmox1" ), verbose = TRUE )

[Package CTDquerier version 2.2.0 Index]