getDE {CeTF} | R Documentation

## Differential Expression accessor for a CeTF class object.

### Description

The DE accessor access the differential expression resulted from `runAnalysis` function analysis.

### Usage

    getDE(x, type = "unique")

    ## S4 method for signature 'CeTF'
    getDE(x, type = "unique")

### Arguments

`x` | `CeTF-class` object
`type` | Type of DE matrix: unique and all (default: unique)

### Value

Returns the DE genes with the statistics.

### See Also

`runAnalysis`.

### Examples

    # load the CeTF class object resulted from runAnalysis function
    data(CeTFdemo)

    getDE(CeTFdemo)

[Package CeTF version 1.6.0 Index]