plotFit {CellNOptR} | R Documentation

## Plot the evolution of an optimisation

### Description

This function takes in the results of an optimisation by gaBinaryT1 and plots the evolution of best fit and average fit against generations.

### Usage

    plotFit(optRes, filename = NULL)

### Arguments

`optRes` | an object created by the optimisation engine (gabinaryT1)
`filename` | NULL or string: if provided, the plot is save in PDF format in the filename.

### Value

This function doesn't return anything, it just produces a plot in your graphics window.

### Author(s)

C. Terfve

### See Also

gaBinaryT1

### Examples

    data(CNOlistToy,package="CellNOptR")
    data(ToyModel,package="CellNOptR")

    #process the model
    model = preprocessing(CNOlistToy,ToyModel)

    #optimise

    ToyT1opt<-gaBinaryT1(
    	CNOlist=CNOlistToy,
    	model=model,
    	maxGens=10,
    	popSize=10,
    	verbose=FALSE)

    plotFit(optRes=ToyT1opt)

[Package CellNOptR version 1.40.0 Index]