.generate_ordination {CellTrails} | R Documentation

## AUX: Orthogonal projection ordination

### Description

Generates 2D ordination from orthogonal projection

### Usage

    .generate_ordination(g, error, factor = 7, rev = FALSE, only.ordi = FALSE)

### Arguments

`g` | Graph from orthogonal projection, `igraph` object
`error` | Error from orthogonal projection; `numeric` vector
`only.ordi` | Compute only ordination?

### Value

A list containing the following components:

``ordi`` | Ordination
``ordi.jitter`` | Jittered ordination
``backbone`` | Backbone of trajectory

### Author(s)

Daniel C. Ellwanger

[Package CellTrails version 1.12.0 Index]