plotAvgProf {ChIPseeker} | R Documentation

## plotAvgProf

### Description

plot the profile of peaks

### Usage

    plotAvgProf(
      tagMatrix,
      xlim,
      xlab = "Genomic Region (5'->3')",
      ylab = "Peak Count Frequency",
      conf,
      facet = "none",
      free_y = TRUE,
      origin_label = "TSS",
      verbose = TRUE,
      ...
    )

### Arguments

`tagMatrix` | tagMatrix or a list of tagMatrix
`xlim` | xlim
`xlab` | x label
`ylab` | y label
`conf` | confidence interval
`facet` | one of 'none', 'row' and 'column'
`free_y` | if TRUE, y will be scaled by AvgProf
`origin_label` | label of the center
`verbose` | print message or not
`...` | additional parameter

### Value

ggplot object

### Author(s)

G Yu; Y Yan

[Package ChIPseeker version 1.30.3 Index]