module.exact {DEComplexDisease} | R Documentation

## Extract the patients and genes from module

### Description

Return the patients and genes from module under user defined setting

### Usage

    module.extract(res.module, mod, n.patients = NULL, n.genes = NULL)

### Arguments

`res.module` | a 'seed.module' or 'cluster.module' object returned by `seed.module` or `cluster.module`
`mod` | a module name to extract genes and patients
`n.patients` | the patient number to return
`n.genes` | the gene number to return

### Details

This function is used to return the patients and genes at user defined breakpoints.

Users can set 'n.patients' or 'n.genes' to define the break points of bi-clustering. But it is not allowed to set both value.

### Value

A list for genes or patients.

### Author(s)

Guofeng Meng

### Examples

    # extract the genes and patients when 200 patients are observed in M1.
    page=module.extract(cluster.mod, 'M1', n.patients=100)
    head(page$patients)
    head(page$geness)
    # find genes and patients in patient-seeded module
    module.extract(seed.mod, names(seed.mod)[1], n.patients=50)

[Package DEComplexDisease version 1.14.0 Index]