createGranges {DEScan2} | R Documentation

## createGranges

### Description

a simplified wrapper function to create a GRanges object.

### Usage

    createGranges(chrSeqInfo, starts, widths, mcolname = NULL, mcolvalues = NULL)

### Arguments

`chrSeqInfo` | a seqinfo object.
`starts` | the start ranges.
`widths` | the width of each range.
`mcolname` | the name for the mcol attribute.
`mcolvalues` | the values for the mcol attribute.

### Value

a GRanges object.

### Examples

    chrSeqInfo <- GenomeInfoDb::Seqinfo(genome="mm9")["chr1"]
    starts=sample(seq_len(100), 10)
    widths=starts+10;
    mcolname <- "z-score";
    mcolvalues <- sample(seq_len(100), 10)
    chrGR <- createGranges(chrSeqInfo=chrSeqInfo, starts=starts, widths=widths,
                  mcolname=mcolname, mcolvalues=mcolvalues)

[Package DEScan2 version 1.14.1 Index]