enrichResult-class {DOSE} | R Documentation

## Class "enrichResult" This class represents the result of enrichment analysis.

### Description

Class "enrichResult" This class represents the result of enrichment analysis.

### Slots

`result`

  enrichment analysis

`pvalueCutoff`

  pvalueCutoff

`pAdjustMethod`

  pvalue adjust method

`qvalueCutoff`

  qvalueCutoff

`organism`

  only "human" supported

`ontology`

  biological ontology

`gene`

  Gene IDs

`keytype`

  Gene ID type

`universe`

  background gene

`gene2Symbol`

  mapping gene to Symbol

`geneSets`

  gene sets

`readable`

  logical flag of gene ID in symbol or not.

`termsim`

  Similarity between term

`method`

  method of calculating the similarity between nodes

`dr`

  dimension reduction result

### Author(s)

Guangchuang Yu https://guangchuangyu.github.io

### See Also

`enrichDO`

[Package DOSE version 3.20.1 Index]