getbootstrapdata {EventPointer} | R Documentation

## getbootstrapdata

### Description

Function to load the values of the bootstrap returned by kallisto or salmon pseudoaligners.

### Usage

    getbootstrapdata(PathSamples, type)

### Arguments

`PathSamples` | A vector with the complete directory to the folder of the output of kallisto/salmon.
`type` | 'kallisto' or 'salmon'.

### Value

A list containing the quantification data with the bootstrap information.

### Examples

           PathSamples<-system.file("extdata",package="EventPointer")
           PathSamples <- paste0(PathSamples,"/output")
           PathSamples <- dir(PathSamples,full.names = TRUE)

           data_exp <- getbootstrapdata(PathSamples = PathSamples,type = "kallisto")

[Package EventPointer version 3.2.0 Index]