SF_Prediction {EventPointer} | R Documentation

## Splicing Factor Prediction

### Description

Methodology to predict context-specific splicing factors

### Usage

    SF_Prediction(
      P_value_PSI,
      ExS,
      nSel = 1000,
      significance = NULL,
      method = "Fisher"
    )

### Arguments

`P_value_PSI` | A data.frame with the p.values of the experiment.
`ExS` | The ExS matrix biuldt in CreateExSmatrix function.
`nSel` | Top ranked events to be considered as spliced events.
`significance` | Threshold of P.value to consider which events are deferentially spliced. A vector of length equal to the number of contrasts. If null it will consider the nSel top ranked events.
`method` | methodology to apply: "Fisher" for Fisher's exact test (default) or "PoiBin" for Poisson Binomial test.

### Value

The function returs a list. This list has for each contrast a data.frame containing the results of the prediction.

[Package EventPointer version 3.2.0 Index]