# GPA (Genetic analysis incorporating Pleiotropy and Annotation)

## Documentation for package ‘GPA’ version 1.6.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

GPA-package | GPA (Genetic analysis incorporating Pleiotropy and Annotation)
assoc | Association mapping
assoc-method | Association mapping
aTest | Hypothesis testing for annotation enrichment
cov | Class "GPA"
cov-method | Class "GPA"
estimates | Class "GPA"
estimates-method | Class "GPA"
fdr | Class "GPA"
fdr-method | Class "GPA"
fitAll | Fit GPA model for all possible pairs of GWAS datasets
GPA | Fit GPA model
GPA-class | Class "GPA"
print-method | Class "GPA"
pTest | Hypothesis testing for pleiotropy
se | Class "GPA"
se-method | Class "GPA"
shinyGPA | Run ShinyGPA app
show-method | Class "GPA"