.getData_Lolliplot	getData-methods
.getData_MutSpectra	getData-methods
.getData_Rainfall	getData-methods
.getData_waterfall	getData-methods
brcaMAF	brcaMAF
Clinical	Clinical-class
Clinical-class	Clinical-class
cnFreq	cnFreq
cnSpec	cnSpec
cnView	cnView
compIdent	compIdent
covBars	covBars
cytoGeno	cytoGeno
drawPlot	drawPlot-methods
drawPlot,Clinical-method	drawPlot-methods
drawPlot,Lolliplot-method	drawPlot-methods
drawPlot,MutSpectra-method	drawPlot-methods
drawPlot,Rainfall-method	drawPlot-methods
drawPlot,Waterfall-method	drawPlot-methods
genCov	genCov
geneViz	geneViz
GenVisR	GenVisR
getData	getData-methods
getData,Clinical-method	getData-methods
getData,ClinicalData-method	getData-methods
getData,Lolliplot-method	getData-methods
getData,LolliplotData-method	getData-methods
getData,MutSpectra-method	getData-methods
getData,MutSpectraPrimaryData-method	getData-methods
getData,Rainfall-method	getData-methods
getData,RainfallPrimaryData-method	getData-methods
getData,Waterfall-method	getData-methods
getData,WaterfallData-method	getData-methods
getDescription	getDescription-methods
getDescription,VEP-method	getDescription-methods
getDescription,VEP_Virtual-method	getDescription-methods
getGrob	getGrob-methods
getGrob,Lolliplot-method	getGrob-methods
getGrob,LolliplotPlots-method	getGrob-methods
getGrob,MutSpectra-method	getGrob-methods
getGrob,MutSpectraPlots-method	getGrob-methods
getGrob,Rainfall-method	getGrob-methods
getGrob,RainfallPlots-method	getGrob-methods
getGrob,Waterfall-method	getGrob-methods
getGrob,WaterfallPlots-method	getGrob-methods
getHeader	getHeader-methods
getHeader,VEP-method	getHeader-methods
getHeader,VEP_Virtual-method	getHeader-methods
getMeta	getMeta-methods
getMeta,GMS-method	getMeta-methods
getMeta,GMS_Virtual-method	getMeta-methods
getMeta,MutationAnnotationFormat-method	getMeta-methods
getMeta,MutationAnnotationFormat_Virtual-method	getMeta-methods
getMeta,VEP-method	getMeta-methods
getMeta,VEP_Virtual-method	getMeta-methods
getMutation	getMutation-methods
getMutation,GMS-method	getMutation-methods
getMutation,GMS_Virtual-method	getMutation-methods
getMutation,MutationAnnotationFormat-method	getMutation-methods
getMutation,MutationAnnotationFormat_Virtual-method	getMutation-methods
getMutation,VEP-method	getMutation-methods
getMutation,VEP_Virtual-method	getMutation-methods
getPath	getPath-methods
getPath,GMS-method	getPath-methods
getPath,MutationAnnotationFormat-method	getPath-methods
getPath,VEP-method	getPath-methods
getPosition	getPosition-methods
getPosition,GMS-method	getPosition-methods
getPosition,GMS_Virtual-method	getPosition-methods
getPosition,MutationAnnotationFormat-method	getPosition-methods
getPosition,MutationAnnotationFormat_Virtual-method	getPosition-methods
getPosition,VEP-method	getPosition-methods
getPosition,VEP_Virtual-method	getPosition-methods
getSample	getSample-methods
getSample,GMS-method	getSample-methods
getSample,GMS_Virtual-method	getSample-methods
getSample,MutationAnnotationFormat-method	getSample-methods
getSample,MutationAnnotationFormat_Virtual-method	getSample-methods
getSample,VEP-method	getSample-methods
getSample,VEP_Virtual-method	getSample-methods
getVersion	getVersion-methods
getVersion,GMS-method	getVersion-methods
getVersion,MutationAnnotationFormat-method	getVersion-methods
getVersion,VEP-method	getVersion-methods
GMS	GMS-class
GMS-class	GMS-class
GMS_v4	GMS_v4-class
GMS_v4-class	GMS_v4-class
GMS_Virtual-class	GMS_Virtual-class
HCC1395_Germline	HCC1395_Germline
HCC1395_N	HCC1395_N
HCC1395_T	HCC1395_T
hg19chr	hg19chr
ideoView	ideoView
lohSpec	lohSpec
lohView	lohView
Lolliplot	Lolliplot-class
lolliplot	lolliplot
Lolliplot-class	Lolliplot-class
lolliplot_AA2sidechain	lolliplot_AA2sidechain
lolliplot_buildMain	lolliplot_buildMain
LucCNseg	LucCNseg
MutationAnnotationFormat	MutationAnnotationFormat-class
MutationAnnotationFormat-class	MutationAnnotationFormat-class
MutationAnnotationFormat_v1.0	MutationAnnotationFormat_v1.0-class
MutationAnnotationFormat_v1.0-class	MutationAnnotationFormat_v1.0-class
MutationAnnotationFormat_v2.0	MutationAnnotationFormat_v2.0-class
MutationAnnotationFormat_v2.0-class	MutationAnnotationFormat_v2.0-class
MutationAnnotationFormat_v2.1	MutationAnnotationFormat_v2.1-class
MutationAnnotationFormat_v2.1-class	MutationAnnotationFormat_v2.1-class
MutationAnnotationFormat_v2.2	MutationAnnotationFormat_v2.2-class
MutationAnnotationFormat_v2.2-class	MutationAnnotationFormat_v2.2-class
MutationAnnotationFormat_v2.3	MutationAnnotationFormat_v2.3-class
MutationAnnotationFormat_v2.3-class	MutationAnnotationFormat_v2.3-class
MutationAnnotationFormat_v2.4	MutationAnnotationFormat_v2.4-class
MutationAnnotationFormat_v2.4-class	MutationAnnotationFormat_v2.4-class
MutationAnnotationFormat_Virtual-class	MutationAnnotationFormat_Virtual-class
MutSpectra	MutSpectra-class
MutSpectra-class	MutSpectra-class
PIK3CA	PIK3CA
Rainfall	Rainfall-class
Rainfall-class	Rainfall-class
SNPloci	SNPloci
TvTi	TvTi
VEP	VEP-class
VEP-class	VEP-class
VEP_v88	VEP_v88-class
VEP_v88-class	VEP_v88-class
VEP_Virtual-class	VEP_Virtual-class
Waterfall	Waterfall-class
waterfall	waterfall
Waterfall-class	Waterfall-class
writeData	writeData-methods
writeData,GMS-method	writeData-methods
writeData,GMS_Virtual	writeData-methods
writeData,GMS_Virtual-method	writeData-methods
writeData,MutationAnnotationFormat-method	writeData-methods
writeData,MutationAnnotationFormat_Virtual	writeData-methods
writeData,MutationAnnotationFormat_Virtual-method	writeData-methods
writeData,VEP-method	writeData-methods
writeData,VEP_Virtual	writeData-methods
writeData,VEP_Virtual-method	writeData-methods
