sc1 {GladiaTOX} | R Documentation

## Perform level 1 single-concentration processing

### Description

`sc1` loads level 0 data from the gtox database for the given id and performs level 1 single-concentration processing. The processed data is then loaded into the sc1 table and all subsequent data is deleted with `gtoxCascade`. See details for more information.

The individual processing functions are no longer exported, as it is typically more convenient and suggested to use the `gtoxRun` wrapper function.

### Usage

    sc1(ac, wr = FALSE)

### Arguments

`ac` | Integer of length 1, assay component id (acid) for processing.
`wr` | Logical, whether the processed data should be written to the gtox database

### Details

Level 1 single-concentration processing includes mapping assay component to assay endpoint, duplicating the data when the assay component has multiple assay endpoints, and any normalization of the data. Data normalization based on methods listed in sc1_aeid and sc1_methods tables.

### Value

A boolean of length 1, indicating the success of the processing, or when 'wr' is FALSE, a list where the first element is a boolean indiciating the success of processing and the second element is a data.table containing the processed data

### See Also

`Method functions`, `SC1_Methods`

Other single-concentration data processing functions: `sc2`

[Package GladiaTOX version 1.10.3 Index]