calculateCTriad {HPiP} | R Documentation

## Calculate Conjoint Triad Descriptor

### Description

This function calculates Conjoint Triad descriptor for data input.

### Usage

    calculateCTriad(x)

### Arguments

`x` | A data.frame containing gene/protein names and their fasta sequences.

### Details

calculateCTriad

### Value

A length 343 named vector for the data input.

### Author(s)

Matineh Rahmatbakhsh, matinerb.94@gmail.com

### References

Shen, J., Zhang, J., Luo, X., Zhu, W., Yu, K., Chen, K., et al. (2007). Predicting protein–protein interactions based only on sequences information. Proc. Natl. Acad. Sci. 104, 4337–4341.

### Examples

    data(UP000464024_df)
    x_df <- calculateCTriad(UP000464024_df)
    head(x_df, n = 2L)

[Package HPiP version 1.0.0 Index]