calculateCTDT {HPiP} | R Documentation

## Calculate CTD Descriptors - Transition (T)

### Description

This function calculates Transition (T) descriptor for data input.

### Usage

    calculateCTDT(x)

### Arguments

`x` | A data.frame containing gene/protein names and their fasta sequences.

### Details

calculateCTDT

### Value

A length 21 named vector for the data input.

### Author(s)

Matineh Rahmatbakhsh, matinerb.94@gmail.com

### References

Dubchak, I., Muchnik, I., Holbrook, S. R., and Kim, S.-H. (1995). Prediction of protein folding class using global description of amino acid sequence. Proc. Natl. Acad. Sci. 92, 8700–8704.

### See Also

See `calculateCTDC` and `calculateCTDD` for Composition and Distribution descriptors.

### Examples

    data(UP000464024_df)
    x_df <- calculateCTDT(UP000464024_df)
    head(x_df, n = 2L)

[Package HPiP version 1.0.0 Index]