calculateDC {HPiP} | R Documentation

## Calculate Dipeptide Composition (DC) Descriptor

### Description

This function calculates Dipeptide Composition (DC) descriptor for data input.

### Usage

    calculateDC(x)

### Arguments

`x` | A data.frame containing gene/protein names and their fasta sequences.

### Details

calculateDC

### Value

A length 400 named vector for the data input.

### Author(s)

Matineh Rahmatbakhsh, matinerb.94@gmail.com

### References

Bhasin, M., and Raghava, G. P. S. (2004). Classification of nuclear receptors based on amino acid composition and dipeptide composition. J. Biol. Chem. 279, 23262–23266.

### See Also

See `calculateAAC` and `calculateTC` for Amino Acid Composition and Tripeptide Composition descriptors.

### Examples

    data(UP000464024_df)
    x_df <- calculateDC(UP000464024_df)
    head(x_df, n = 2L)

[Package HPiP version 1.0.0 Index]