62750c19ad2f784d13df58567411ee28 *DESCRIPTION
81aba68e190c4a78abda2af01d4a51be *INDEX
85c7b8b857abd6c0e208aec752d0c977 *LICENSE
946baf2820052668fe127f7090ef7c0f *Meta/Rd.rds
3ba17d2de3085066dbfc34f1bb68b922 *Meta/data.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
855943c1541ebd6cd4a8d9a5eb458cd4 *Meta/hsearch.rds
5df7f4071404ebb5648aed79f107841f *Meta/links.rds
6db8484371c06fc79a9c916c7fc19b3f *Meta/nsInfo.rds
043f8854a90fafd21da11604e2dc940f *Meta/package.rds
7dde6884d98b4f2904ffa755f8f62128 *Meta/vignette.rds
7129b2c6a2642e46e1d46619400e3373 *NAMESPACE
b58675cd907799c4b77f35b89f3ff083 *NEWS.md
d6c68f1fe41ced6e98a766a3757313da *R/HPiP
fe9c4758775f82c89edb079f35365fdb *R/HPiP.rdb
4a71488cee457b3d102f7bf60cd53374 *R/HPiP.rdx
bfa8f0e13e823a226efe808cb69e5444 *R/sysdata.rdb
7db59bb176994265e191dcf80d3f4a32 *R/sysdata.rdx
d4acca426b1d0769e55b80944bef0ac0 *data/Gold_ReferenceSet.rda
7d76eb7eee75ec423537a1c93d96f839 *data/UP000464024_df.rda
c3f23fd4be9c60907928b0b79c30c4cc *data/datalist
5441153cd368eedc29b640022be013b2 *data/enrich.df.rda
9fa7c688fdf7ea8cedec2e6a1c2d2035 *data/example_data.rda
52b6c5d71e101e0c449b1a99703874a1 *data/host_se.rda
d3ad04b046d9476897530c7aab9f87cc *data/predicted_PPIs.rda
7df0971bf5df818d8575021ae8c0628f *data/unlabel_data.rda
b37e672d6b17a0cc41428ef5c24fb678 *data/viral_se.rda
aa47e15eb8da9e2d1394437692529245 *doc/HPiP_tutorial.R
d13358f94772705882d7472957c1101c *doc/HPiP_tutorial.Rmd
7e542c1a56537fdf7b41800f2b8a0efd *doc/HPiP_tutorial.html
805deb293cc39ea6aaaa71ef616b20c9 *doc/index.html
0c58ef02dc11e90eab4d304185ef7df3 *extdata/AAidx.csv
c3d5e354e458ce50f9e94628fa118483 *extdata/README.md
a97b18c460f2828bfff3b7b7c6b39539 *extdata/TP_set.csv
4b7079233da6d2a7c57c4d9f70409a5d *extdata/UP000464024.fasta
11b649a10d6ee6a8b8c0399e60e9a304 *help/AnIndex
69a7d1ed2247a211aefc187853a468c9 *help/FSmethod.html
f249a22620a594add1bf8e88a504faab *help/FreqInteractors.html
87ba3f7c9c29bd6ad1ff88b1c11f6781 *help/Gold_ReferenceSet.html
e584afd47740bdaaa9c27b8b1547a089 *help/HPiP.rdb
5ae07466d61b406145834df8cc546069 *help/HPiP.rdx
f0bf2e16a6dc2bc9d7a302a544a978a0 *help/UP000464024_df.html
079158af6e9f382c5ed81ceb5206f548 *help/aliases.rds
5356e1d654442f7007350288d8d15a30 *help/calculateAAC.html
3cdc2f25cb996cbc4d705c0c006c6fa1 *help/calculateAutocor.html
592fb50dd809cd35f87e6c1f6c02b9b6 *help/calculateBE.html
de031a256691fa84757d26ab82a92604 *help/calculateCTDC.html
a979627e5190d9769be04ad5979cb58a *help/calculateCTDD.html
47a3e1726f0051e5f2446a4e212bf9a9 *help/calculateCTDT.html
221b3b882f54a6fc0399d66ee366a88d *help/calculateCTriad.html
663f77fafce2441a7669bdf9f2668e53 *help/calculateDC.html
6f61370786614d9c406b4c7408c151ad *help/calculateF.html
be4c3313d13182f4fd6b437d9be4bbdb *help/calculateKSAAP.html
157e863defbe930c41a2922cb0fe0fef *help/calculateQD_Sm.html
ada180242f846f63bb305d07531f874c *help/calculateTC.html
800f7c453c932655174de7859b1fee69 *help/calculateTC_Sm.html
4ff3756218da6e344a2f539ede8d9e6b *help/corr_plot.html
939520e426a24717268a8605f3a36f5e *help/enrich.df.html
27460b7a50ed58d690579c1584176de9 *help/enrichfindP.html
244f44107c4ef9f202f7822302128b9d *help/enrichplot.html
c18a5869ba94540207af5a413c0f8452 *help/example_data.html
a94d179f12cbf1066d1104c8a3592d43 *help/filter_missing_values.html
4c4cdae57f47ba13d794f760ae625bc3 *help/getFASTA.html
ea168347775db1f957fe68b3e553e593 *help/getHPI.html
733ac468fe8b4471838a7906757f2ade *help/get_negativePPI.html
814fc62f3905feb73fdce371fa222898 *help/get_positivePPI.html
c5dd2b39277c7408e52bd48ce151fa33 *help/host_se.html
9d2e9be49fac464f84e5c7bf78f0404b *help/impute_missing_data.html
9ba5145284330eb50408b5b947fd33cc *help/paths.rds
c52cabf18c62fa124e5a1e582b28eb8d *help/plotPPI.html
dfa74a9c95e133af8c0bb1d041252067 *help/pred_ensembel.html
69db5bdc427f91abe9fbd093bae066a0 *help/predicted_PPIs.html
8b41d8ac555f4809aea58eebb9a5087e *help/unlabel_data.html
e3ef39d6ce88822bf62dae8543668fbd *help/var_imp.html
991d13614b982ee200fb408b71d8b016 *help/viral_se.html
93aad3e599fda9953a1e35f17ef1f33c *html/00Index.html
4e53fff8be6b43c3fc003d7f6e0ca0dc *html/FSmethod.html
17ffef0a96ff60149ce3910d69fb6373 *html/FreqInteractors.html
c6f2531c702dce8270a6c8e8eb99662d *html/Gold_ReferenceSet.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
db372e2f1f2640d5197b629f431420f0 *html/UP000464024_df.html
4ea662473a27b2d80d1c930414b10425 *html/calculateAAC.html
b6320663c2857b2e78392f9c42936f0b *html/calculateAutocor.html
fb9a92486dcd1ee6f20a84469d478cff *html/calculateBE.html
ae12fa4fa7c6082be39d29c893de4d36 *html/calculateCTDC.html
cc8fdd03ad490524d5d2d8773dec2a87 *html/calculateCTDD.html
6776aa53b72e88a31f5b598dc885aa3f *html/calculateCTDT.html
0a01d69faa8a9f2611e3182924640ece *html/calculateCTriad.html
9865cd4b23d1bc679d199a4f62a5076e *html/calculateDC.html
d135d540610758b693d578329896054e *html/calculateF.html
8d590801ecefcbb29471c6fe8a094d85 *html/calculateKSAAP.html
dcf76a3e9a09d541f65530c858725398 *html/calculateQD_Sm.html
52d9409b7dccfe0be966d5bcc5451988 *html/calculateTC.html
8619ae3846650ed0bf78cbc701547d34 *html/calculateTC_Sm.html
ec2377e148ab94eae5d820aff4b8b4d4 *html/corr_plot.html
bc0412aa61507ad7adfd8dc6be7c8904 *html/enrich.df.html
1bad8e06fda905946a8720ef90aa9bc2 *html/enrichfindP.html
b9217803812511d498b976b07a7b9dfe *html/enrichplot.html
77e2e20ee8f6c35c8a33ccd0278c0ae7 *html/example_data.html
a829dbe99e692a715c99c5e4b06ca45c *html/filter_missing_values.html
6d46ce1d20641abe15c9cd0e1ab6e2a6 *html/getFASTA.html
d7b2adf6e7dfb4f407048e83210378bf *html/getHPI.html
46e3b75a9be8bcef714de02c086893b0 *html/get_negativePPI.html
975311eb4cfb209bb73deb25b013616e *html/get_positivePPI.html
61cc53d7771c3e75e016c2a4ca71fd58 *html/host_se.html
73b4ed683e36b5e85a7dbfd0b7e42fa1 *html/impute_missing_data.html
5414ebc29a97e06f112a01140414b2f0 *html/plotPPI.html
121b4b462c61e7e176f8e0c80bc06e31 *html/pred_ensembel.html
648be8d5b683084b9982134fdbdb7874 *html/predicted_PPIs.html
28d64bc13e43be96146600a6e7f214f8 *html/unlabel_data.html
9765f30bf5bea83831c338a4d49ce3ec *html/var_imp.html
1cfd36531861b14cbbb2738b1ddaacf8 *html/viral_se.html
b432b456f9b0b4126d521ef0378b5894 *unitTests/test_calculateAAC.R
97da33a0c3b5cc34ab80193e7e3fa635 *unitTests/test_calculateBE.R
320b7525bbd0b69c2213d4b6eb79c7b4 *unitTests/test_calculateDC.R
53bccabdf08535bd65cb38439141ba02 *unitTests/test_enrich.df.R
ce3efe19d78854093c22f4fd83666a54 *unitTests/test_getHPI.R
106de1012d376839e0743d6142737050 *unitTests/test_get_negativePPI.R
cc198c7c49281967ac99c5c363aef93c *unitTests/test_get_positivePPI.R
781e580c73af13945434b68d356aec0a *unitTests/test_pred_ensembel.R
