calculateQD_Sm {HPiP} | R Documentation

## Calculate Quadruples Composition (QC) Descriptor from Biochemical Similarity Classes

### Description

This function calculates Quadruples Composition (QC) descriptor from biochemical similarity classes.

### Usage

    calculateQD_Sm(x)

### Arguments

`x` | A data.frame containing gene/protein names and their fasta sequences.

### Details

calculateQD_Sm

### Value

A length 1296 named vector for the data input.

### Author(s)

Matineh Rahmatbakhsh, matinerb.94@gmail.com

### References

Ahmed, I., Witbooi, P., and Christoffels, A. (2018). Prediction of human-Bacillus anthracis protein–protein interactions using multi-layer neural network.Bioinformatics 34, 4159–4164.

### Examples

    data(UP000464024_df)
    x_df <- calculateQD_Sm(UP000464024_df)
    head(x_df, n = 2L)

[Package HPiP version 1.0.0 Index]