FSmethod                Feature Selection via Matrix Correlation and
                        Recursive Feature Elimination (RFE)
FreqInteractors         Plot the Pathogen Proteins' frequency of
                        Interactions with Host Proteins
Gold_ReferenceSet       Gold-standard Reference Set of Inter-Species
                        PPIs
UP000464024_df          Data.frame Containing SARS-CoV-2 FASTA
                        Sequences
calculateAAC            Calculate Amino Acid Composition (AAC)
                        Descriptor
calculateAutocor        Calculate Autocorrelation Descriptors
calculateBE             Tranform a Seqeuence into Binary Encoding (BE)
calculateCTDC           Calculate CTD Descriptors - Composition (C)
calculateCTDD           Calculate CTD Descriptors - Distribution (D)
calculateCTDT           Calculate CTD Descriptors - Transition (T)
calculateCTriad         Calculate Conjoint Triad Descriptor
calculateDC             Calculate Dipeptide Composition (DC) Descriptor
calculateF              Calculate F1 or F2 Descriptors
calculateKSAAP          Calculate k-spaced Amino Acid Pairs (KSAAP)
                        Descriptor
calculateQD_Sm          Calculate Quadruples Composition (QC)
                        Descriptor from Biochemical Similarity Classes
calculateTC             Calculate Tripeptide Composition (TC)
                        Descriptor
calculateTC_Sm          Calculate Tripeptide Composition (TC)
                        Descriptor from Biochemical Similarity Classes
corr_plot               Plot Correlation Matrix between Input Features
enrich.df               Enrichment Result
enrichfindP             Functional Enrichment Analysis for Pathogen
                        Interactors in the High-Confidence Network.
enrichplot              Plot the Enrichment Reuslt
example_data            Input Data for Prediction Algorithm
filter_missing_values   Drop the Missing Values Above a Certain
                        Threshold
getFASTA                Fetch FASTA Sequence from the UniProt Database
getHPI                  Generating Host-Pathogen Protein-Protein
                        Interaction (HP-PPI) Descriptors
get_negativePPI         Construct Negative Reference Host-Pathogen
                        Protein-Protein Interactions (HP-PPIs)
get_positivePPI         Fetch Positive Reference Host-Pathogen
                        Protein-Protein Interactions (HP-PPIs) from the
                        BioGRID Database
host_se                 Host SummarizedExperiment object
impute_missing_data     Impute missing Values per Features (i.e.,
                        Columns)
plotPPI                 Plot the Predicted PPI
pred_ensembel           Predict Interactions via Ensemble Learning
                        Method
predicted_PPIs          Predicted HP-PPIs
unlabel_data            HP-PPIs with Unknown Class Labels
var_imp                 Variable Importance Plot
viral_se                Viral SummarizedExperiment object
