EstimatedParameters-class {HiLDA} | R Documentation

## An S4 class representing the estimated parameters

### Description

An S4 class representing the estimated parameters

### Slots

`sampleList`

  a list of sample names observed in the input mutation data

`signatureNum`

  the number of mutation signatures specified at the time of estimation

`isBackGround`

  the flag showing whether the background signature data is used or not.

`backGroundProb`

  the background signatures

`signatureFeatureDistribution`

  estimated parameters for mutation signatures

`sampleSignatureDistribution`

  estimated parameters for memberships of mutation signatures for each sample

`loglikelihood`

  the log-likelihood value for the estimated parameters

[Package HiLDA version 1.8.0 Index]