PlotHeatmap {IRISFGM} | R Documentation

## PlotHeatmap

### Description

PlotHeatmap

plot heatmap based on bicluster

### Usage

    PlotHeatmap(object, ...)

    .plotHeatmap(
      object = object,
      N.bicluster = c(1, 5),
      show.overlap = FALSE,
      show.annotation = FALSE,
      show.clusters = FALSE
    )

    ## S4 method for signature 'IRISFGM'
    PlotHeatmap(
      object = object,
      N.bicluster = c(1, 5),
      show.overlap = FALSE,
      show.annotation = FALSE,
      show.clusters = FALSE
    )

### Arguments

`object` | Input IRISFGM object
`...` | other arguments passed to methods
`N.bicluster` | Number of biclusters.
`show.overlap` | Parameter (logic) indicates whether the figure shows the overlap part between two selected biclusters.
`show.annotation` | Parameter (logic) indicates whether to show annotation (biclusters number and cell cluster labels).
`show.clusters` | Parameter (logic) indicates whether to show the cell cluster label.

### Value

It will generate a heatmap based on selected two FGMs.

### Examples

    data(example_object)
    PlotHeatmap(example_object,
    N.bicluster = c(1,20),
    show.annotation = TRUE,
    show.cluster =TRUE)

[Package IRISFGM version 1.2.0 Index]