polish_CPs {InPAS} | R Documentation

## polish the searching results of CP sites

### Description

remove the multiple positions of CP sites for same 3' UTRs and only keep the best CP sites for proximal and distal.

### Usage

    polish_CPs(CPs)

### Arguments

`CPs` | output of `search_proximalCPs()` or `adjust_proximalCPs()`

### Value

a matrix with columns: "fit_value", "Predicted_Proximal_APA", "Predicted_Distal_APA", "utr3start", "utr3end", "type"

### Author(s)

Jianhong Ou

### See Also

`adjust_proximalCPs()`, `adjust_proximalCPsByPWM()`, `adjust_proximalCPsByNBC()`, `get_PAscore2()`

[Package InPAS version 2.2.0 Index]