find_segmentationSites {InPAS} | R Documentation

## Find optimal segmentation sites by minimizing MSE

### Description

Find optimal segmentation sites by minimizing MSE

### Usage

    find_segmentationSites(
      .ele,
      search_point_START,
      search_point_END,
      n = 1,
      savedID = NA
    )

### Arguments

`.ele` | 3' UTR coverage
`search_point_START` | start position to calculate
`search_point_END` | end position to calculate
`n` | the length of output. If set to -1, return all candidate CP sites
`savedID` | the proximal CPsites

### Value

a list of MSE and candidate APA sites

### Author(s)

Jianhong Ou

[Package InPAS version 2.2.0 Index]