get_imputed_data {MOFA2} | R Documentation

## Get imputed data

### Description

Function to get the imputed data. It requires the previous use of the `impute` method.

### Usage

    get_imputed_data(
      object,
      views = "all",
      groups = "all",
      features = "all",
      as.data.frame = FALSE
    )

### Arguments

`object` | a trained `MOFA` object.
`views` | character vector with the view name(s), or numeric vector with the view index(es). Default is "all".
`groups` | character vector with the group name(s), or numeric vector with the group index(es). Default is "all".
`features` | list of character vectors with the feature names or list of numeric vectors with the feature indices. Default is "all".
`as.data.frame` | logical indicating whether to return a long-formatted data frame instead of a list of matrices. Default is `FALSE`.

### Details

Data is imputed from the generative model of MOFA.

### Value

A list containing the imputed valued or a data.frame if as.data.frame is TRUE

### Examples

    # Using an existing trained model
    file <- system.file("extdata", "model.hdf5", package = "MOFA2")
    model <- load_model(file)
    model <- impute(model)
    imputed <- get_imputed_data(model)

[Package MOFA2 version 1.4.0 Index]