splitTrainClusters {MetaNeighbor} | R Documentation

## Split train clusters according to AUROC similarity to test clusters.

### Description

This function computes hierarchical clustering to group similar train clusters, using similarity to test clusters as features, then uses a standard tree cutting algorithm to obtain groups of similar clusters. Note that the cluster hierarchy corresponds exactly to the column dendrogram shown when using the plotHeatmapPretrained function.

### Usage

    splitTrainClusters(mn_scores, k)

### Arguments

`mn_scores` | An AUROC matrix as generated by MetaNeighborUS, usually with the "trained_model" option.
`k` | The number of desired cluster sets.

### Value

A list of cluster sets, each cluster set is a character vector containg cluster labels.

### See Also

`plotHeatmapPretrained`

[Package MetaNeighbor version 1.14.0 Index]