icaSetKim {MineICA} | R Documentation

## IcaSet-object containing a FastICA decomposition of gene expression microarrray-based data of bladder cancer samples.

### Description

Object of class `IcaSet` containing an ICA decomposition calculated by the FastICA algorithm (through matlab function "icasso") on bladder cancer expression data measured on illumina Human-6 BeadChip, version 2. It contains 20 independent components. The original expression data contain 165 tumor samples, were normalized by the authors of the paper with Illumina BeadStudio software using Quantile normalization and log2 transformation, and are restricted to the 10000 most variable probe sets.

### Author(s)

Anne

### References

http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE13507

[Package MineICA version 1.34.0 Index]