filterExperiment {MinimumDistance} | R Documentation

## Methods for filtering MinDistExperiment objects

### Description

Filter a MinDistExperiment object to exclude markers with missing values in the low-level summaries, exclude markers that lie in segments (`granges` argument) with small minimum distance values (unlikely to be de novo)

### Usage

    filterExperiment(object, granges, param)

    ## S4 method for signature 'MinDistExperiment,GRanges'
    filterExperiment(object, granges, param)

    ## S4 method for signature 'MinDistExperiment,GRangesList'
    filterExperiment(object, granges, param)

    ## S4 method for signature 'MinDistExperiment,MinDistGRanges'
    filterExperiment(object, granges, param)

### Arguments

`object` | A `MinDistExperiment`
`granges` | A `GRanges`, `GRangesList`, or `MinDistGRanges` object
`param` | a `MinDistParam` object

### Value

a `MinDistExperiment`

[Package MinimumDistance version 1.38.0 Index]