vinayagam_download {OmnipathR} | R Documentation

## Protein-protein interactions from Vinayagam 2011

### Description

Retrieves the Supplementary Table S6 from Vinayagam et al. 2011. Find out more at https://doi.org/10.1126/scisignal.2001699.

### Usage

    vinayagam_download()

### Value

A data frame (tibble) with interactions.

### Examples

    vinayagam_interactions <- vinayagam_download()
    vinayagam_interactions
    # # A tibble: 34,814 x 5
    #    `Input-node Gen. `Input-node Gen. `Output-node Ge. `Output-node Ge.
    #    <chr>                       <dbl> <chr>                       <dbl>
    #  1 C1orf103                    55791 MNAT1                        4331
    #  2 MAST2                       23139 DYNLL1                       8655
    #  3 RAB22A                      57403 APPL2                       55198
    #  4 TRAP1                       10131 EXT2                         2132
    #  5 STAT2                        6773 COPS4                       51138
    # # . with 34,804 more rows, and 1 more variable:
    # # `Edge direction score` <dbl>

[Package OmnipathR version 3.2.0 Index]