print_path_vs {OmnipathR} | R Documentation

## Print networks paths given by node sequence

### Description

Prints the interactions in the path in a nice format.

### Usage

    print_path_vs(nodeSeq, G)

### Arguments

`nodeSeq` | node sequence
`G` | igraph object (from ptms or interactions)

### Value

Returns 'NULL'.

### See Also

`print_path_es`

### Examples

    interactions <- import_omnipath_interactions(resources=c('SignaLink3'))
    OPI_g <- interaction_graph(interactions = interactions)
    print_path_vs(
        igraph::all_shortest_paths(
            OPI_g,
            from = 'TYRO3',
            to = 'STAT3'
        )$vpath,
        OPI_g
    )
    enzsub <- import_omnipath_enzsub(resources=c('PhosphoSite', 'SIGNOR'))
    enzsub_g <- enzsub_graph(enzsub)
    print_path_vs(
        igraph::all_shortest_paths(
            enzsub_g,
            from = 'SRC',
            to = 'STAT1'
        )$res,
        enzsub_g
    )

[Package OmnipathR version 3.2.0 Index]