guide2pharma_download {OmnipathR} | R Documentation

## Downloads interactions from the Guide to Pharmacology database

### Description

Downloads ligand-receptor interactions from the Guide to Pharmacology (IUPHAR/BPS) database (https://www.guidetopharmacology.org/).

### Usage

    guide2pharma_download()

### Value

A tibble (data frame) of interactions as it is provided by the database

### Examples

    g2p_data <- guide2pharma_download()
    g2p_data
    # # A tibble: 21,586 x 38
    #    target target_id target_gene_sym. target_uniprot target_ensembl_.
    #    <chr>      <dbl> <chr>            <chr>          <chr>
    #  1 12S-L.      1387 ALOX12           P18054         ENSG00000108839
    #  2 15-LO.      1388 ALOX15           P16050         ENSG00000161905
    #  3 15-LO.      1388 ALOX15           P16050         ENSG00000161905
    #  4 15-LO.      1388 ALOX15           P16050         ENSG00000161905
    # # . with 21,576 more rows, and 33 more variables: target_ligand <chr>,
    # #   target_ligand_id <chr>, target_ligand_gene_symbol <chr>,
    # ... (truncated)

[Package OmnipathR version 3.2.0 Index]