subset,CohortList-method {PDATK} | R Documentation

## Subset method for a `CohortList`

### Description

Works using endoapply of `[` over the list `SurvivalExperiment`s

### Usage

    ## S4 method for signature 'CohortList'
    subset(x, subset = TRUE, select = TRUE, invert = FALSE)

### Arguments

`x` | A `CohortList` object
`subset` | The row query. Defaults to TRUE, i.e., select all.
`select` | The column query. Defaults to TRUE, i.e., select all.
`invert` | A `logical` vector indicating if the matches should be inverted. Default is FALSE.

### Value

A `CohortList` containing only the rows and columns selected in i and j, respectively.

### Examples

    data(sampleCohortList)
    commonGenes <- findCommonGenes(sampleCohortList)
    commonGenesCohortList <- subset(sampleCohortList, subset=commonGenes)

[Package PDATK version 1.2.0 Index]