gold_standard {PrInCE} | R Documentation

## Reference set of human protein complexes

### Description

A reference set of 467 experimentally confirmed human protein complexes, derived from the EBI Complex Portal database.

### Usage

    data(gold_standard)

### Format

a list containing 467 entries (character vectors)

### Details

467 protein complexes, ranging in size from 2 to 44 proteins and involving 877 proteins in total, to provide a reference set of true positive and true negative interactions (intra- and inter-complex interactions, respectively) for demonstration in PrInCE analysis of a co-elution dataset. Other "gold standards" are possible in practice, most notably the CORUM database; however, the Complex Portal reference set is included in this package due to its CC-BY license.

### Source

https://www.ebi.ac.uk/complexportal/complex/organisms

[Package PrInCE version 1.10.0 Index]