bowtie2_usage {Rbowtie2} | R Documentation

## Print available arguments that can be passed to bowtie2()

### Description

Calling bowtie2_usage() prints the available arguments that can be passed to the ... argument of the bowtie2() function of the package. Note that some arguments are invalid if they are already handled as explicit function arguments.

### Usage

    bowtie2_usage()

### Value

Information about available arguments that can be passed to bowtie2().

### Author(s)

Zheng Wei

### References

Langmead, B., & Salzberg, S. L. (2012). Fast gapped-read alignment with Bowtie 2. Nature methods, 9(4), 357-359.

### Examples

    bowtie2_usage()

[Package Rbowtie2 version 2.0.0 Index]