0b6a9f934c0f914073b94c9eafb90427 *DESCRIPTION
0c61f6b1ade3bcf9650de33f40c5963f *INDEX
c1f5ac012a284bd98b50860009c906c7 *Meta/Rd.rds
0a89a5d852706b51c4477463d259705b *Meta/data.rds
b0e4a813b58830eed832d8353fd83580 *Meta/demo.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
2f34c9b5b1ee9d0431b41264d5c0e469 *Meta/hsearch.rds
e68bbb09213e9f16b03142940c4509f3 *Meta/links.rds
0276185181ff5902c4460bdd149434fb *Meta/nsInfo.rds
255f6c0f4f440a85f40cb851585c3147 *Meta/package.rds
727e9c47524fb495122157c38480e699 *Meta/vignette.rds
8f127a10177c0b6dddd807ca561ecf82 *NAMESPACE
d6c68f1fe41ced6e98a766a3757313da *R/Rmagpie
efc5f17d859fad7a5b9efd2c7f864453 *R/Rmagpie.rdb
553e7a2dbe5c957c597f1263a483e5b0 *R/Rmagpie.rdx
d66457c0bca99eeb013ee6ae8383fab5 *data/vV70genesDataset.rda
07da835c613337e36f6938917db36ffd *demo/demoCV.R
7a0312a359fe5b4ca7b49865c7ba31c0 *demo/demoClassifyNewSample.R
c9ac8510996570fe019a6e96c249c497 *demo/demoPlots.r
b4a5b9b0d2c704602b03f8cd4c5617a4 *doc/Magpie_examples.R
3e590e5803bfe4acf4921ebf391e41e9 *doc/Magpie_examples.Rnw
95d981c6514c305a3c8f4477fcdc98fc *doc/Magpie_examples.pdf
b9d954f9cf8da6c56f0e33ae481d33ed *doc/index.html
7470847fcbc220c412ff81df394662f3 *extdata/raw_classes.txt
b015635555dd71abadf307881838465d *extdata/raw_geneExpr.txt
168e9e0da1db9363646caec1b1ce84ca *extdata/vV_newSamples.txt
b3b2a4b3a9b6af4f20aadf869490a33a *help/AnIndex
00bbc1e75a3f0e2b53b89c0c36ff0ef7 *help/Rmagpie.rdb
5a7cf6c166689654dabb56f2a80337aa *help/Rmagpie.rdx
886b801fb475e07b65daff4166f6d756 *help/aliases.rds
a5372809f36eec87279d825549cd5051 *help/assessment-class.html
b9f9de01c3d8ae053e881221bf6df514 *help/classifyNewSamples+2Cassessment-method.html
b9f9de01c3d8ae053e881221bf6df514 *help/classifyNewSamples-methods.html
b9f9de01c3d8ae053e881221bf6df514 *help/classifyNewSamples.html
a5372809f36eec87279d825549cd5051 *help/experiment-class.html
f687309c1f032de230b66f8e6d782750 *help/featureSelectionOptions-class.html
c7374abe791df9d9e993d521e5d1cbb6 *help/finalClassifier-class.html
55deb8112ae742b42d063183570c6149 *help/findFinalClassifier+2Cassessment-method.html
55deb8112ae742b42d063183570c6149 *help/findFinalClassifier-methods.html
55deb8112ae742b42d063183570c6149 *help/findFinalClassifier.html
292623e856be9f66d8b7a6a5953be594 *help/geneSubsets-class.html
a5372809f36eec87279d825549cd5051 *help/getClassifierName+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getClassifierName+3C-+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getClassifierName+3C-.html
a5372809f36eec87279d825549cd5051 *help/getClassifierName.html
57e78a4c219a757d5d408415d4141aa3 *help/getDataset+2Cassessment-method.html
cc40a7ead31ac4bb989d2f89aa168b69 *help/getDataset+3C-+2Cassessment-method.html
cc40a7ead31ac4bb989d2f89aa168b69 *help/getDataset+3C--methods.html
cc40a7ead31ac4bb989d2f89aa168b69 *help/getDataset+3C-.html
57e78a4c219a757d5d408415d4141aa3 *help/getDataset-methods.html
57e78a4c219a757d5d408415d4141aa3 *help/getDataset.html
a5372809f36eec87279d825549cd5051 *help/getFeatureSelectionMethod+2Cassessment-method.html
b713d1f81386a3f5fd010d1adb1a9291 *help/getFeatureSelectionOptions+2Cassessment-method.html
4ffb9b3013bd0ab94b4213b9a0ad2a65 *help/getFeatureSelectionOptions+3C-+2Cassessment-method.html
4ffb9b3013bd0ab94b4213b9a0ad2a65 *help/getFeatureSelectionOptions+3C--methods.html
4ffb9b3013bd0ab94b4213b9a0ad2a65 *help/getFeatureSelectionOptions+3C-.html
b713d1f81386a3f5fd010d1adb1a9291 *help/getFeatureSelectionOptions-methods.html
b713d1f81386a3f5fd010d1adb1a9291 *help/getFeatureSelectionOptions.html
7eb4dbfcb9df24d199412b48d6881f65 *help/getFinalClassifier+2Cassessment-method.html
7eb4dbfcb9df24d199412b48d6881f65 *help/getFinalClassifier-methods.html
7eb4dbfcb9df24d199412b48d6881f65 *help/getFinalClassifier.html
c7374abe791df9d9e993d521e5d1cbb6 *help/getGenesFromBestToWorst+2CfinalClassifier-method.html
c7374abe791df9d9e993d521e5d1cbb6 *help/getGenesFromBestToWorst.html
292623e856be9f66d8b7a6a5953be594 *help/getMaxSubsetSize+2CgeneSubsets-method.html
292623e856be9f66d8b7a6a5953be594 *help/getMaxSubsetSize+3C-+2CgeneSubsets-method.html
292623e856be9f66d8b7a6a5953be594 *help/getMaxSubsetSize+3C-.html
292623e856be9f66d8b7a6a5953be594 *help/getMaxSubsetSize.html
c7374abe791df9d9e993d521e5d1cbb6 *help/getModels+2CfinalClassifier-method.html
c7374abe791df9d9e993d521e5d1cbb6 *help/getModels.html
a5372809f36eec87279d825549cd5051 *help/getNoFolds1stLayer+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getNoFolds1stLayer+3C-+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getNoFolds1stLayer+3C-.html
a5372809f36eec87279d825549cd5051 *help/getNoFolds1stLayer.html
a5372809f36eec87279d825549cd5051 *help/getNoFolds2ndLayer+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getNoFolds2ndLayer+3C-+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getNoFolds2ndLayer+3C-.html
a5372809f36eec87279d825549cd5051 *help/getNoFolds2ndLayer.html
292623e856be9f66d8b7a6a5953be594 *help/getNoModels+2CgeneSubsets-method.html
292623e856be9f66d8b7a6a5953be594 *help/getNoModels.html
a5372809f36eec87279d825549cd5051 *help/getNoOfRepeats+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getNoOfRepeats+3C-+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getNoOfRepeats+3C-.html
a5372809f36eec87279d825549cd5051 *help/getNoOfRepeats.html
ab064893a2ee7e564fa930f492a036bb *help/getNoThresholds+2Cthresholds-method.html
ab064893a2ee7e564fa930f492a036bb *help/getNoThresholds+3C-+2Cthresholds-method.html
ab064893a2ee7e564fa930f492a036bb *help/getNoThresholds+3C-.html
ab064893a2ee7e564fa930f492a036bb *help/getNoThresholds.html
f687309c1f032de230b66f8e6d782750 *help/getOptionValues+2CfeatureSelectionOptions-method.html
ab064893a2ee7e564fa930f492a036bb *help/getOptionValues+2Cthresholds-method.html
ab064893a2ee7e564fa930f492a036bb *help/getOptionValues+3C-+2Cthresholds-method.html
ab064893a2ee7e564fa930f492a036bb *help/getOptionValues+3C-.html
ab064893a2ee7e564fa930f492a036bb *help/getOptionValues.html
a5372809f36eec87279d825549cd5051 *help/getResult1LayerCV+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getResult1LayerCV+3C-+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getResult1LayerCV+3C-.html
a5372809f36eec87279d825549cd5051 *help/getResult1LayerCV.html
a5372809f36eec87279d825549cd5051 *help/getResult2LayerCV+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getResult2LayerCV+3C-+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getResult2LayerCV+3C-.html
a5372809f36eec87279d825549cd5051 *help/getResult2LayerCV.html
c9e0cd05e534ba70148b2492915ec7df *help/getResults+2Cassessment-method.html
c9e0cd05e534ba70148b2492915ec7df *help/getResults-methods.html
c9e0cd05e534ba70148b2492915ec7df *help/getResults.html
292623e856be9f66d8b7a6a5953be594 *help/getSpeed+2CgeneSubsets-method.html
292623e856be9f66d8b7a6a5953be594 *help/getSpeed+3C-+2CgeneSubsets-method.html
292623e856be9f66d8b7a6a5953be594 *help/getSpeed+3C-.html
292623e856be9f66d8b7a6a5953be594 *help/getSpeed.html
292623e856be9f66d8b7a6a5953be594 *help/getSubsetsSizes+2CgeneSubsets-method.html
292623e856be9f66d8b7a6a5953be594 *help/getSubsetsSizes+3C-+2CgeneSubsets-method.html
292623e856be9f66d8b7a6a5953be594 *help/getSubsetsSizes+3C-.html
292623e856be9f66d8b7a6a5953be594 *help/getSubsetsSizes.html
a5372809f36eec87279d825549cd5051 *help/getSvmKernel+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getSvmKernel+3C-+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getSvmKernel+3C-.html
a5372809f36eec87279d825549cd5051 *help/getSvmKernel.html
a5372809f36eec87279d825549cd5051 *help/getTypeFoldCreation+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getTypeFoldCreation+3C-+2Cassessment-method.html
a5372809f36eec87279d825549cd5051 *help/getTypeFoldCreation+3C-.html
a5372809f36eec87279d825549cd5051 *help/getTypeFoldCreation.html
196ec5ccdfa4dd74bbb0b8a1536eab8d *help/initialize+2Cassessment-method.html
196ec5ccdfa4dd74bbb0b8a1536eab8d *help/initialize+2CgeneSubsets-method.html
196ec5ccdfa4dd74bbb0b8a1536eab8d *help/initialize+2Cthresholds-method.html
196ec5ccdfa4dd74bbb0b8a1536eab8d *help/initialize-methods.html
12cdc2419a3a29a707b871f72e1ef3b9 *help/paths.rds
c619d4885c788197030deb8bd0f6ffad *help/plotErrorsFoldTwoLayerCV+2Cassessment-method.html
c619d4885c788197030deb8bd0f6ffad *help/plotErrorsFoldTwoLayerCV-methods.html
c619d4885c788197030deb8bd0f6ffad *help/plotErrorsFoldTwoLayerCV.html
f78a100b9f50148e768a3c7683393764 *help/plotErrorsRepeatedOneLayerCV+2Cassessment-method.html
f78a100b9f50148e768a3c7683393764 *help/plotErrorsRepeatedOneLayerCV-methods.html
f78a100b9f50148e768a3c7683393764 *help/plotErrorsRepeatedOneLayerCV.html
863f0950a5685533b4757b965a921a8d *help/plotErrorsSummaryOneLayerCV+2Cassessment-method.html
863f0950a5685533b4757b965a921a8d *help/plotErrorsSummaryOneLayerCV-methods.html
863f0950a5685533b4757b965a921a8d *help/plotErrorsSummaryOneLayerCV.html
317505039f35eb66abe4c20cbacf7807 *help/rankedGenesImg+2Cassessment-method.html
317505039f35eb66abe4c20cbacf7807 *help/rankedGenesImg-methods.html
317505039f35eb66abe4c20cbacf7807 *help/rankedGenesImg.html
f1942248056372b021933b407a534e15 *help/runOneLayerExtCV+2Cassessment-method.html
f1942248056372b021933b407a534e15 *help/runOneLayerExtCV-methods.html
f1942248056372b021933b407a534e15 *help/runOneLayerExtCV.html
e43fe5bb2f31a95f8ceaa62a131e6723 *help/runTwoLayerExtCV+2Cassessment-method.html
e43fe5bb2f31a95f8ceaa62a131e6723 *help/runTwoLayerExtCV-methods.html
e43fe5bb2f31a95f8ceaa62a131e6723 *help/runTwoLayerExtCV.html
cc40a7ead31ac4bb989d2f89aa168b69 *help/setDataset-methods.html
4ffb9b3013bd0ab94b4213b9a0ad2a65 *help/setFeatureSelectionOptions-methods.html
2a304d01e83640e386e0e7182e3d094e *help/show+2Cassessment-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CcvErrorRate-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CcvErrorRate2ndLayer-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CerrorRate1stLayerCV-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CerrorRate2ndLayerCV-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CfinalClassifier-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CfrequencyGenes-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CfrequencyTopGenePerOneModel-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CgeneSubsets-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2Cresult2LayerCV-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CresultRepeated1LayerCV-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CresultRepeated2LayerCV-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CresultSingle1LayerCV-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CselectedGenes-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CselectedGenes1stLayerCV-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CselectedGenes2ndLayerCV-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2CselectedGenesPerOneOption-method.html
2a304d01e83640e386e0e7182e3d094e *help/show+2Cthresholds-method.html
2a304d01e83640e386e0e7182e3d094e *help/show-methods.html
ab064893a2ee7e564fa930f492a036bb *help/thresholds-class.html
23c67c15387d9dfaff40303849376c6f *help/vV70genes.html
0b06876fa5a7b19c4c47076c3eb2d2f5 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
85dc5201fe088fbc8165cfccbc89139f *html/classifyNewSamples-methods.html
47b7ec491ee1aeee3dc8145b760e6fc3 *html/experiment-class.html
0d996f2fc1c431018dd2cacccec9b041 *html/featureSelectionOptions-class.html
17e89b03465a930445652fc319b17a42 *html/finalClassifier-class.html
78687b72698afa24ea0b5badc8106064 *html/findFinalClassifier-methods.html
79fe75f5eaf0f5548433ccba851102d6 *html/geneSubsets-class.html
32c67068b5a529df9858d9469314d2d7 *html/getDataset-methods.html
f8ca8423b3dcbc8d9f2857b169bd991c *html/getFeatureSelectionOptions-methods.html
055cb9c52fc94cf2f7aa0d11d8adba5f *html/getFinalClassifier.html
0fa54e6b698b5c26728bc4c126ac93eb *html/getResults-methods.html
c511a4c617b9d9cadf516c7f9de83795 *html/initialize-methods.html
f9cfea28026e951d46c9e0bc73e5ebb3 *html/plotErrorsFoldTwoLayerCV-methods.html
907958a678d86762d09493148315c5aa *html/plotErrorsRepeatedOneLayerCV.html
893f394b81187725ee809d8cdeed2545 *html/plotErrorsSummaryOneLayerCV-methods.html
ab62d7d134173d0632bddc9042e9f1e6 *html/rankedGenesImg-methods.html
40ab8a9c35339c70dc1eab3a2fdf8067 *html/runOneLayerExtCV-methods.html
158cc5a196a586ea6de5c850c3c31ad2 *html/runTwoLayerExtCV-methods.html
8c646da951af046f768db5b262b159c6 *html/setDataset-methods.html
f41d87822cc362480cd6b71fa4dca6bb *html/setFeatureSelectionOptions-methods.html
0d0618cb37cad39f1998039bdf0dc0b6 *html/show-methods.html
49bdcaf34f2de77509d21b7a876f3330 *html/thresholds-class.html
d782cd7d70dcc930f846c2a05459fd39 *html/vV70genes.html
