accepted {RnBeads} | R Documentation

## RnBeads option values and restrictions

### Description

The values of options in RnBeads are stored in dedicated R objects accompanying the package. These objects are named `infos`, `accepted`, `current` and `previous`. They should not be loaded or otherwise operated on by users. Please refer to the documentation of `rnb.options` for accessing and modifying option values in RnBeads.

### Format

`infos` is a `data.frame` containing information about all options in RnBeads. Row names in this table are the option names; the column names are `"Type"`, `"Named"`, `"Null"`, `"Max"`, `"Min"`, `"MaxInclusive"` and `"MinInclusive"`. `accepted` is a `list` containing the sets of accepted values for some of the options. `current` is a `list` with current values for all options. `previous` is a `list` with previous values for the affected options; this list is only temporarily used while setting option values through `rnb.options` or `rnb.xml2options`.

### Author(s)

Yassen Assenov

[Package RnBeads version 2.12.2 Index]