GeneExp {SEPIRA} | R Documentation

## RNA-seq data matrix from GTEx

### Description

`GeneExp` is a gene expression data matrix with rows (467 genes) and 520 columns. This data matrix is a subset of GTEx RNA-seq data which is a very big dataset. In this subset we only randomly chose 20 samples from each tissue type with more than 50 samples in the original GTEx data set.

### Usage

    data("GeneExp")

### Format

The format is: num [1:467, 1:520] 0.0361 0.758 0.5484 2.3569 6.1973 ... - attr(*, "dimnames")=List of 2 ..$ : chr [1:467] "9496" "22797" "7080" "6943" ... ..$ : chr [1:520] "Adipose Tissue" "Adipose Tissue" "Adipose Tissue" "Adipose Tissue" ...

### Source

https://www.gtexportal.org/home/

### Examples

    data(GeneExp)
    ## view the first 5 rows and columns
    GeneExp[1:5,1:5]

[Package SEPIRA version 1.14.0 Index]