siamcat_example {SIAMCAT} | R Documentation

## SIAMCAT example

### Description

Reduced version of the CRC dataset from Zeller et al. MSB 2014 (see http://msb.embopress.org/content/10/11/766), containing 100 features (15 associated features at 5% FDR in the original dataset and 85 random other features) and 141 samples, saved after the complete SIAMCAT pipelinehas been run.

Thus, the example dataset contains entries in every slot of the SIAMCAT object (see siamcat-class), e.g, `eval_data` or `data_split`.

Mainly used for running the examples in the function documentation.

### Source

http://msb.embopress.org/content/10/11/766

[Package SIAMCAT version 1.14.0 Index]