createVisiumSCE {Spaniel} | R Documentation

## createVisiumSCE

### Description

A function to select to import 10X data into an SCE object

### Usage

    createVisiumSCE(tenXDir = "../outs", resolution = "Low")

### Arguments

`tenXDir` | The path to Space Ranger outs directory containing spatial directory and filtered_feature_bc_matric
`resolution` | Resolution of the tissue image to be used for plotting. Can be either "High", or "Low". Default is "Low".

### Value

SingleCellExperimentObject

### Examples

    tenXDir <- file.path(system.file(package = "Spaniel"), "extdata/outs")
    sce <- createVisiumSCE(tenXDir, resolution = "Low")

[Package Spaniel version 1.8.0 Index]