download_profile_matrix {SpatialDecon} | R Documentation

## Download a cell profile matrix

### Description

Download a cell profile matrix from the online library

### Usage

    download_profile_matrix(species, age_group, matrixname)

### Arguments

`species` | species of profile matrix
`age_group` | age_group of profile matrix, if fetal mouse please add the developmental stage separated with /, i.e. Fetal/E14.5
`matrixname` | name of profile matrix

### Details

Valid matrices can be found on the github site https://github.com/Nanostring-Biostats/CellProfileLibrary/tree/NewProfileMatrices

### Value

A cell profile matrix, suggested cell groups, and paper metadata

### Examples

    download_profile_matrix(species = "Human", age_group = "Adult", matrixname = "Colon_HCA")
    head(profile_matrix)
    print(cellGroups)
    print(metadata)

[Package SpatialDecon version 1.4.3 Index]